RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A KIN3P22209 435 aa8.52□□□□□ -1.05
TGA1tA(UGC)A GPI10P30777 616 aa8.52□□□□□ -1.05
TGA1tA(UGC)A SEG2P34250 1132 aa8.52□□□□□ -1.05
TGA1tA(UGC)A YKL050CP35736 922 aa8.52□□□□□ -1.05
TGA1tA(UGC)A HSL7P38274 827 aa8.52□□□□□ -1.05
TGA1tA(UGC)A YER189WP40104 122 aa8.52□□□□□ -1.05
TGA1tA(UGC)A SYH1Q02875 849 aaKnown RBP8.52□□□□□ -1.05
TGA1tA(UGC)A ERV41Q04651 352 aa8.52□□□□□ -1.05
TGA1tA(UGC)A RTN1Q04947 295 aaKnown RBP8.52□□□□□ -1.05
TGA1tA(UGC)A PMT7Q06644 662 aa8.52□□□□□ -1.05
TGA1tA(UGC)A CIR2Q08822 631 aa8.52□□□□□ -1.05
TGA1tA(UGC)A FUS1P11710 512 aa8.51□□□□□ -1.05
TGA1tA(UGC)A FPR1P20081 114 aaKnown RBP8.51□□□□□ -1.05
TGA1tA(UGC)A SPT5P27692 1063 aaKnown RBP8.51□□□□□ -1.05
TGA1tA(UGC)A SEC1P30619 724 aaKnown RBP8.51□□□□□ -1.05
TGA1tA(UGC)A JNM1P36224 373 aa8.51□□□□□ -1.05
TGA1tA(UGC)A GGA2P38817 585 aaKnown RBP8.51□□□□□ -1.05
TGA1tA(UGC)A NMD3P38861 518 aaKnown RBP8.51□□□□□ -1.05
TGA1tA(UGC)A HEM14P40012 539 aa8.51□□□□□ -1.05
TGA1tA(UGC)A ATG3P40344 310 aa8.51□□□□□ -1.05
TGA1tA(UGC)A YIR007WP40566 764 aa8.51□□□□□ -1.05
TGA1tA(UGC)A ERG10P41338 398 aaKnown RBP8.51□□□□□ -1.05
TGA1tA(UGC)A UFE1P41834 346 aa8.51□□□□□ -1.05
TGA1tA(UGC)A COQ6P53318 479 aa8.51□□□□□ -1.05
TGA1tA(UGC)A YPR084WQ06821 456 aa8.51□□□□□ -1.05
TGA1tA(UGC)A ADE3P07245 946 aaKnown RBP8.5□□□□□ -1.05
TGA1tA(UGC)A KAR3P17119 729 aa8.5□□□□□ -1.05
TGA1tA(UGC)A ABD1P32783 436 aaPredicted RBP8.5□□□□□ -1.05
TGA1tA(UGC)A RRN6P32786 894 aa8.5□□□□□ -1.05
TGA1tA(UGC)A PTC3P34221 468 aaKnown RBP8.5□□□□□ -1.05
TGA1tA(UGC)A SMC2P38989 1170 aaKnown RBP8.5□□□□□ -1.05
TGA1tA(UGC)A LYS9P38999 446 aa8.5□□□□□ -1.05
TGA1tA(UGC)A YAP5P40574 245 aa8.5□□□□□ -1.05
TGA1tA(UGC)A SXM1Q04175 944 aaKnown RBP8.5□□□□□ -1.05
TGA1tA(UGC)A SIL1Q08199 421 aa8.5□□□□□ -1.05
TGA1tA(UGC)A YOR059CQ08448 450 aaKnown RBP8.5□□□□□ -1.05
TGA1tA(UGC)A APL4Q12028 832 aa8.5□□□□□ -1.05
TGA1tA(UGC)A ATG9Q12142 997 aa8.5□□□□□ -1.05
TGA1tA(UGC)A SVS1Q12254 260 aa8.5□□□□□ -1.05
TGA1tA(UGC)A ARP7Q12406 477 aa8.5□□□□□ -1.05
TGA1tA(UGC)A SPO21Q12411 609 aa8.5□□□□□ -1.05
TGA1tA(UGC)A VPS5Q92331 675 aa8.5□□□□□ -1.05
TGA1tA(UGC)A MSB2P32334 1306 aa8.5□□□□□ -1.05
TGA1tA(UGC)A YIH1P25637 258 aa8.49□□□□□ -1.05
TGA1tA(UGC)A SPT23P35210 1082 aa8.49□□□□□ -1.05
TGA1tA(UGC)A SET5P38890 526 aaKnown RBP8.49□□□□□ -1.05
TGA1tA(UGC)A TMN3P40071 706 aa8.49□□□□□ -1.05
TGA1tA(UGC)A ASG1P40467 964 aa8.49□□□□□ -1.05
TGA1tA(UGC)A KTR7P40504 517 aa8.49□□□□□ -1.05
TGA1tA(UGC)A RTT101P47050 842 aa8.49□□□□□ -1.05
TGA1tA(UGC)A VTC4P47075 721 aa8.49□□□□□ -1.05
TGA1tA(UGC)A MRX6P48564 524 aa8.49□□□□□ -1.05
TGA1tA(UGC)A YGR021WP53212 290 aa8.49□□□□□ -1.05
TGA1tA(UGC)A KTR6P54070 446 aa8.49□□□□□ -1.05
TGA1tA(UGC)A YPR148CQ06523 435 aa8.49□□□□□ -1.05
TGA1tA(UGC)A THI20Q08224 551 aa8.49□□□□□ -1.05
TGA1tA(UGC)A YPK1P12688 680 aaKnown RBP8.48□□□□□ -1.05
TGA1tA(UGC)A CAP1P28495 268 aaKnown RBP8.48□□□□□ -1.05
TGA1tA(UGC)A MET22P32179 357 aa8.48□□□□□ -1.05
TGA1tA(UGC)A HXT1P32465 570 aa8.48□□□□□ -1.05
TGA1tA(UGC)A SGE1P33335 543 aa8.48□□□□□ -1.05
TGA1tA(UGC)A NCL1P38205 684 aaKnown RBP8.48□□□□□ -1.05
TGA1tA(UGC)A DUN1P39009 513 aa8.48□□□□□ -1.05
TGA1tA(UGC)A PSY2P40164 858 aa8.48□□□□□ -1.05
TGA1tA(UGC)A SNG1P46950 547 aa8.48□□□□□ -1.05
TGA1tA(UGC)A RSM26P47141 266 aa8.48□□□□□ -1.05
TGA1tA(UGC)A PEX31P53203 462 aa8.48□□□□□ -1.05
TGA1tA(UGC)A YGR283CP53336 341 aaPredicted RBP8.48□□□□□ -1.05
TGA1tA(UGC)A IMP4P53941 290 aaKnown RBP8.48□□□□□ -1.05
TGA1tA(UGC)A ELP3Q02908 557 aaKnown RBP8.48□□□□□ -1.05
TGA1tA(UGC)A ARA2Q04212 335 aa8.48□□□□□ -1.05
TGA1tA(UGC)A GYL1Q04322 720 aa8.48□□□□□ -1.05
TGA1tA(UGC)A NDD1Q08887 554 aa8.48□□□□□ -1.05
TGA1tA(UGC)A PAB1P04147 577 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
TGA1tA(UGC)A ERG11P10614 530 aa8.47□□□□□ -1.05
TGA1tA(UGC)A HOM2P13663 365 aaKnown RBP8.47□□□□□ -1.05
TGA1tA(UGC)A VMA4P22203 233 aaKnown RBP8.47□□□□□ -1.05
TGA1tA(UGC)A STE5P32917 917 aa8.47□□□□□ -1.05
TGA1tA(UGC)A SWC5P38326 303 aa8.47□□□□□ -1.05
TGA1tA(UGC)A FAA4P47912 694 aaKnown RBP8.47□□□□□ -1.05
TGA1tA(UGC)A VEL1P53058 206 aa8.47□□□□□ -1.05
TGA1tA(UGC)A YDR278CQ05612 105 aa8.47□□□□□ -1.05
TGA1tA(UGC)A YRR1Q12172 810 aa8.47□□□□□ -1.05
TGA1tA(UGC)A CET1O13297 549 aaPredicted RBP8.46□□□□□ -1.06
TGA1tA(UGC)A GFA1P14742 717 aaKnown RBP8.46□□□□□ -1.06
TGA1tA(UGC)A CYC8P14922 966 aa8.46□□□□□ -1.06
TGA1tA(UGC)A PSE1P32337 1089 aaKnown RBP8.46□□□□□ -1.06
TGA1tA(UGC)A LAM1P38851 1228 aa8.46□□□□□ -1.06
TGA1tA(UGC)A ERP2P39704 215 aa8.46□□□□□ -1.06
TGA1tA(UGC)A YIL054WP40524 105 aa8.46□□□□□ -1.06
TGA1tA(UGC)A TRM112P53738 135 aaPredicted RBP8.46□□□□□ -1.06
TGA1tA(UGC)A YNR065CP53751 1116 aa8.46□□□□□ -1.06
TGA1tA(UGC)A CWC24P53769 259 aa8.46□□□□□ -1.06
TGA1tA(UGC)A YNL108CP53929 270 aa8.46□□□□□ -1.06
TGA1tA(UGC)A RPN4Q03465 531 aa8.46□□□□□ -1.06
TGA1tA(UGC)A YMR206WQ03695 313 aa8.46□□□□□ -1.06
TGA1tA(UGC)A YMR018WQ04364 514 aa8.46□□□□□ -1.06
TGA1tA(UGC)A DAS2Q12084 232 aa8.46□□□□□ -1.06
TGA1tA(UGC)A MET16P18408 261 aaPredicted RBP8.45□□□□□ -1.06
TGA1tA(UGC)A RAD57P25301 460 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms