RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 YER175W-AQ8TGU4 54 aa0□□□□□ -2.41
snR53snR53 BI2P03873 423 aa-0.01□□□□□ -2.41
snR53snR53 SEC6P32844 805 aa-0.01□□□□□ -2.41
snR53snR53 AKL1P38080 1108 aaKnown RBP-0.01□□□□□ -2.41
snR53snR53 TIF4631P39935 952 aaKnown RBP-0.01□□□□□ -2.41
snR53snR53 YIL077CP40508 320 aa-0.01□□□□□ -2.41
snR53snR53 TPO2P53283 614 aa-0.01□□□□□ -2.41
snR53snR53 REC102Q02721 264 aa-0.01□□□□□ -2.41
snR53snR53 HMO1Q03973 246 aaKnown RBP-0.01□□□□□ -2.41
snR53snR53 ESF1Q06344 628 aaKnown RBP-0.01□□□□□ -2.41
snR53snR53 MSC6Q08818 692 aaKnown RBP-0.01□□□□□ -2.41
snR53snR53 YBR298C-AQ8TGK4 73 aa-0.01□□□□□ -2.41
snR53snR53 SOD1P00445 154 aaKnown RBP-0.02□□□□□ -2.41
snR53snR53 YNL195CP40168 261 aa-0.02□□□□□ -2.41
snR53snR53 PRE5P40302 234 aaKnown RBP-0.02□□□□□ -2.41
snR53snR53 RSC8P43609 557 aaKnown RBP-0.02□□□□□ -2.41
snR53snR53 YLR281CQ05863 155 aa-0.02□□□□□ -2.41
snR53snR53 YPR071WQ12346 211 aa-0.02□□□□□ -2.41
snR53snR53 WHI2P12611 486 aa-0.03□□□□□ -2.41
snR53snR53 CDC23P16522 626 aa-0.03□□□□□ -2.41
snR53snR53 SBA1P28707 216 aaKnown RBP-0.03□□□□□ -2.41
snR53snR53 PRO3P32263 286 aaKnown RBP-0.03□□□□□ -2.41
snR53snR53 MNN1P39106 762 aa-0.03□□□□□ -2.41
snR53snR53 MET10P39692 1035 aa-0.03□□□□□ -2.41
snR53snR53 GSM1P42950 618 aa-0.03□□□□□ -2.41
snR53snR53 YIP4P53093 235 aa-0.03□□□□□ -2.41
snR53snR53 GPN2Q08726 347 aaPredicted RBP-0.03□□□□□ -2.41
snR53snR53 TOM71P38825 639 aaKnown RBP-0.04□□□□□ -2.42
snR53snR53 SMK1P41808 388 aa-0.04□□□□□ -2.42
snR53snR53 TY4A-JP47023 414 aa-0.04□□□□□ -2.42
snR53snR53 SNU56Q03782 492 aaKnown RBP-0.04□□□□□ -2.42
snR53snR53 YDL073WQ07454 984 aa-0.04□□□□□ -2.42
snR53snR53 YBR182C-AQ8TGU6 64 aa-0.04□□□□□ -2.42
snR53snR53 SEC1P30619 724 aaKnown RBP-0.05□□□□□ -2.42
snR53snR53 KRI1P42846 591 aaKnown RBP-0.05□□□□□ -2.42
snR53snR53 YPI1P43587 155 aa-0.05□□□□□ -2.42
snR53snR53 YPT11P48559 417 aa-0.05□□□□□ -2.42
snR53snR53 VTC3Q02725 835 aa-0.05□□□□□ -2.42
snR53snR53 NAN1Q02931 896 aaKnown RBP-0.05□□□□□ -2.42
snR53snR53 DIF1O13577 133 aa-0.06□□□□□ -2.42
snR53snR53 AGP1P25376 633 aa-0.06□□□□□ -2.42
snR53snR53 YBR284WP38150 797 aa-0.06□□□□□ -2.42
snR53snR53 COS111P38308 924 aa-0.06□□□□□ -2.42
snR53snR53 TDA10P42938 290 aa-0.06□□□□□ -2.42
snR53snR53 GFD1Q04839 188 aaKnown RBP-0.06□□□□□ -2.42
snR53snR53 GSH2Q08220 491 aa-0.06□□□□□ -2.42
snR53snR53 BI3Q9ZZW7 517 aa-0.06□□□□□ -2.42
snR53snR53 PMS1P14242 873 aa-0.07□□□□□ -2.42
snR53snR53 RNR3P21672 869 aaKnown RBP-0.07□□□□□ -2.42
snR53snR53 RPS2P25443 254 aaKnown RBP-0.07□□□□□ -2.42
snR53snR53 BUD14P27637 709 aa-0.07□□□□□ -2.42
snR53snR53 YJL070CP40361 888 aa-0.07□□□□□ -2.42
snR53snR53 RLP7P40693 322 aaKnown RBP-0.07□□□□□ -2.42
snR53snR53 CUL3P53202 744 aa-0.07□□□□□ -2.42
snR53snR53 OYE2Q03558 400 aaKnown RBP-0.07□□□□□ -2.42
snR53snR53 WAR1Q03631 944 aa-0.07□□□□□ -2.42
snR53snR53 HRD3Q05787 833 aa-0.07□□□□□ -2.42
snR53snR53 YFT2Q06676 274 aa-0.07□□□□□ -2.42
snR53snR53 HBS1P32769 611 aaKnown RBP-0.08□□□□□ -2.42
snR53snR53 MSN2P33748 704 aa-0.08□□□□□ -2.42
snR53snR53 FYV10P40492 516 aa-0.08□□□□□ -2.42
snR53snR53 ZDS1P50111 915 aaKnown RBP-0.08□□□□□ -2.42
snR53snR53 SPO1P53541 631 aa-0.08□□□□□ -2.42
snR53snR53 BOR1P53838 576 aa-0.08□□□□□ -2.42
snR53snR53 DMA2P53924 522 aa-0.08□□□□□ -2.42
snR53snR53 MFM1Q02783 413 aa-0.08□□□□□ -2.42
snR53snR53 ECM22Q05958 814 aaPredicted RBP-0.08□□□□□ -2.42
snR53snR53 TAH18Q12181 623 aa-0.08□□□□□ -2.42
snR53snR53 SEC18P18759 758 aaKnown RBP-0.09□□□□□ -2.42
snR53snR53 CNE1P27825 502 aa-0.09□□□□□ -2.42
snR53snR53 PPG1P32838 368 aa-0.09□□□□□ -2.42
snR53snR53 PFA4Q12006 378 aa-0.09□□□□□ -2.42
snR53snR53 YLL056CQ12177 298 aa-0.09□□□□□ -2.42
snR53snR53 PDA1P16387 420 aaKnown RBP-0.1□□□□□ -2.43
snR53snR53 SEC15P22224 910 aa-0.1□□□□□ -2.43
snR53snR53 GSH1P32477 678 aa-0.1□□□□□ -2.43
snR53snR53 IMD2P38697 523 aaKnown RBP-0.1□□□□□ -2.43
snR53snR53 MIP6P38760 659 aaKnown RBP-0.1□□□□□ -2.43
snR53snR53 STM1P39015 273 aaKnown RBP-0.1□□□□□ -2.43
snR53snR53 IMD3P50095 523 aaKnown RBP-0.1□□□□□ -2.43
snR53snR53 BUD17P53727 317 aa-0.1□□□□□ -2.43
snR53snR53 CWC24P53769 259 aa-0.1□□□□□ -2.43
snR53snR53 RMD1Q03441 430 aa-0.1□□□□□ -2.43
snR53snR53 YPL216WQ08964 1102 aa-0.1□□□□□ -2.43
snR53snR53 FAL1Q12099 399 aaKnown RBP-0.1□□□□□ -2.43
snR53snR53 ILS1P09436 1072 aaKnown RBP-0.11□□□□□ -2.43
snR53snR53 EMC3P36039 253 aa-0.11□□□□□ -2.43
snR53snR53 QRI7P43122 407 aa-0.11□□□□□ -2.43
snR53snR53 FAA4P47912 694 aaKnown RBP-0.11□□□□□ -2.43
snR53snR53 MAL11P53048 616 aa-0.11□□□□□ -2.43
snR53snR53 YNL144CP53907 740 aa-0.11□□□□□ -2.43
snR53snR53 RPN7Q06103 429 aaKnown RBP-0.11□□□□□ -2.43
snR53snR53 REH1Q06709 432 aa-0.11□□□□□ -2.43
snR53snR53 POM34Q12445 299 aa-0.11□□□□□ -2.43
snR53snR53 YOR131CQ12486 218 aa-0.11□□□□□ -2.43
snR53snR53 PNO1Q99216 274 aaKnown RBP-0.11□□□□□ -2.43
snR53snR53 CET1O13297 549 aaPredicted RBP-0.12□□□□□ -2.43
snR53snR53 YJU2P28320 278 aaPredicted RBP-0.12□□□□□ -2.43
snR53snR53 YEL045CP32616 141 aa-0.12□□□□□ -2.43
snR53snR53 PRS1P32895 427 aaKnown RBP-0.12□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms