RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	YJL007C	P47080	104 aa		5.2	□□□□□ -1.58
GDB1	YPR184W	PET117	Q02771	107 aa		5.2	□□□□□ -1.58
GDB1	YPR184W	DON1	Q05610	365 aa		5.2	□□□□□ -1.58
GDB1	YPR184W	YLR177W	Q06251	628 aa		5.2	□□□□□ -1.58
GDB1	YPR184W	GET4	Q12125	312 aa		5.2	□□□□□ -1.58
GDB1	YPR184W	LDB19	Q12502	818 aa		5.2	□□□□□ -1.58
GDB1	YPR184W	PET309	P32522	965 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	PET127	P32606	800 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	TCA17	P32613	152 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	ELM1	P32801	640 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	BCS1	P32839	456 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	APM3	P38153	483 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	HSM3	P38348	480 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	HAL5	P38970	855 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	SSP120	P39931	234 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	FAA4	P47912	694 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	NUT1	P53114	1132 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	TGL2	P54857	326 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	MUB1	Q03162	620 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	MZM1	Q03429	123 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	ENT5	Q03769	411 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	ARA2	Q04212	335 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	SPC24	Q04477	213 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	RSA3	Q05942	220 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	AIM39	Q08223	395 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	THP2	O13539	261 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	HAP2	P06774	265 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	TIF1	P10081	395 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	VPS34	P22543	875 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	PRP22	P24384	1145 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	LOS1	P33418	1100 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	RRN3	P36070	627 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	NTR2	P36118	322 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	PHO88	P38264	188 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	RRP3	P38712	501 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	GAA1	P39012	614 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	SCC4	P40090	624 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	GCV2	P49095	1034 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	SML1	Q04964	104 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	SPH1	Q06160	661 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	YPL191C	Q08930	360 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	RPP1B	P10622	106 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	YSC83	P32792	385 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	CSE2	P33308	149 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	URA8	P38627	578 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	PMT3	P47190	753 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	NCS6	P53088	359 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	YNR021W	P53723	404 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	SXM1	Q04175	944 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	GAC1	P28006	793 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	MLS1	P30952	554 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	ASH1	P34233	588 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	TOM20	P35180	183 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	CTF13	P35203	478 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	APT2	P36973	181 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	BTT1	P40314	149 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	YJR061W	P40355	935 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	CSM2	P40465	213 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	RPS10B	P46784	105 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	GUF1	P46943	645 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	GRS2	Q06817	618 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	RPS10A	Q08745	105 aa	Predicted RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	HMI1	Q12039	706 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	DAS2	Q12084	232 aa		5.19	□□□□□ -1.58
GDB1	YPR184W	PKH2	Q12236	1081 aa	Known RBP	5.19	□□□□□ -1.58
GDB1	YPR184W	TUB2	P02557	457 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	ATE1	P16639	503 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	COX11	P19516	300 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	PDC6	P26263	563 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	ABD1	P32783	436 aa	Predicted RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	SAW1	P39735	261 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	ATG3	P40344	310 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	UTP25	P40498	721 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	SIP4	P46954	829 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	MAG2	Q06436	670 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	RRP9	Q06506	573 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	RTC5	Q12108	567 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	RPS5	P26783	225 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	RRT2	P38332	387 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	HXT5	P38695	592 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	CCT2	P39076	527 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	RGA1	P39083	1007 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	IRR1	P40541	1150 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	TRS85	P46944	698 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	YNL143C	P53908	130 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	ADE12	P80210	433 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	PMT7	Q06644	662 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	ARP6	Q12509	438 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	PCD1	Q12524	340 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	MDM35	O60200	86 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
GDB1	YPR184W	TYE7	P33122	291 aa	Predicted RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	YET1	P35723	206 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	KAP104	P38217	918 aa	Known RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	LEM3	P42838	414 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	ALF1	P53904	254 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	ADI1	Q03677	179 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	FAP7	Q12055	197 aa	Predicted RBP	5.18	□□□□□ -1.58
GDB1	YPR184W	TFC8	Q12308	588 aa		5.18	□□□□□ -1.58
GDB1	YPR184W	YLR462W	O13556	202 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 108.6 ms