RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	RSC8	P43609	557 aa	Known RBP	4.87	□□□□□ -1.63
SNF8	YPL002C	YJL163C	P46996	555 aa		4.87	□□□□□ -1.63
SNF8	YPL002C	NOG2	P53742	486 aa	Known RBP	4.87	□□□□□ -1.63
SNF8	YPL002C	HEF3	P53978	1044 aa	Known RBP	4.87	□□□□□ -1.63
SNF8	YPL002C	YML037C	Q03703	340 aa		4.87	□□□□□ -1.63
SNF8	YPL002C	LRS4	Q04087	347 aa	Known RBP	4.87	□□□□□ -1.63
SNF8	YPL002C	YDL144C	Q07589	356 aa		4.87	□□□□□ -1.63
SNF8	YPL002C	CUE2	P36075	443 aa	Known RBP	4.86	□□□□□ -1.63
SNF8	YPL002C	SAK1	P38990	1142 aa		4.86	□□□□□ -1.63
SNF8	YPL002C	GYP8	P43570	497 aa		4.86	□□□□□ -1.63
SNF8	YPL002C	CRR1	Q05790	422 aa		4.86	□□□□□ -1.63
SNF8	YPL002C	UBR2	Q07963	1872 aa		4.86	□□□□□ -1.63
SNF8	YPL002C	DAL5	P15365	543 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	BCS1	P32839	456 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	EMC3	P36039	253 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	PZF1	P39933	429 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	PFA3	P42836	336 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	SKP2	P42843	763 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	UBP6	P43593	499 aa	Known RBP	4.85	□□□□□ -1.63
SNF8	YPL002C	SSY5	P47002	699 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	NIT3	P49954	291 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	TAD1	P53065	400 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	YGR125W	P53273	1036 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	YNL193W	P53870	558 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	IRC13	Q08630	104 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	YDR524C-B	Q3E6R4	66 aa		4.85	□□□□□ -1.63
SNF8	YPL002C	PRC1	P00729	532 aa		4.84	□□□□□ -1.63
SNF8	YPL002C	PRE8	P23639	250 aa		4.84	□□□□□ -1.63
SNF8	YPL002C	MNN4	P36044	1178 aa		4.84	□□□□□ -1.63
SNF8	YPL002C	PCL5	P38794	229 aa		4.84	□□□□□ -1.63
SNF8	YPL002C	TIF4631	P39935	952 aa	Known RBP	4.84	□□□□□ -1.63
SNF8	YPL002C	SOL4	P53315	255 aa		4.84	□□□□□ -1.63
SNF8	YPL002C	NRG1	Q03125	231 aa		4.84	□□□□□ -1.63
SNF8	YPL002C	RTP1	Q12751	981 aa		4.84	□□□□□ -1.63
SNF8	YPL002C	YLR415C	O13578	112 aa		4.83	□□□□□ -1.64
SNF8	YPL002C	RPP0	P05317	312 aa	Known RBP	4.83	□□□□□ -1.64
SNF8	YPL002C	MCM4	P30665	933 aa	Known RBP	4.83	□□□□□ -1.64
SNF8	YPL002C	AMA1	P50082	593 aa		4.83	□□□□□ -1.64
SNF8	YPL002C	YGR283C	P53336	341 aa	Predicted RBP	4.83	□□□□□ -1.64
SNF8	YPL002C	ASM4	Q05166	528 aa		4.83	□□□□□ -1.64
SNF8	YPL002C	RPN7	Q06103	429 aa	Known RBP	4.83	□□□□□ -1.64
SNF8	YPL002C	GPR1	Q12361	961 aa		4.83	□□□□□ -1.64
SNF8	YPL002C	OSH2	Q12451	1283 aa		4.83	□□□□□ -1.64
SNF8	YPL002C	CIT1	P00890	479 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	HSP60	P19882	572 aa	Known RBP	4.82	□□□□□ -1.64
SNF8	YPL002C	UTR4	P32626	227 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	GRX7	P38068	203 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	TDP1	P38319	544 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	VID30	P53076	958 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	DAK1	P54838	584 aa	Known RBP	4.82	□□□□□ -1.64
SNF8	YPL002C	SLD5	Q03406	294 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	CSI1	Q04368	295 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	THI21	Q08975	551 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	TGL5	Q12043	749 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	DAP1	Q12091	152 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	NCB2	Q92317	146 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	FAB1	P34756	2278 aa		4.82	□□□□□ -1.64
SNF8	YPL002C	RPS19A	P07280	144 aa	Known RBP	4.81	□□□□□ -1.64
SNF8	YPL002C	RPS19B	P07281	144 aa	Predicted RBP	4.81	□□□□□ -1.64
SNF8	YPL002C	RAD18	P10862	487 aa		4.81	□□□□□ -1.64
SNF8	YPL002C	NGG1	P32494	702 aa		4.81	□□□□□ -1.64
SNF8	YPL002C	PEX2	P32800	271 aa		4.81	□□□□□ -1.64
SNF8	YPL002C	RPS0B	P46654	252 aa	Known RBP	4.81	□□□□□ -1.64
SNF8	YPL002C	RSC3	Q06639	885 aa		4.81	□□□□□ -1.64
SNF8	YPL002C	LAM4	P38800	1345 aa		4.8	□□□□□ -1.64
SNF8	YPL002C	LAT1	P12695	482 aa	Known RBP	4.8	□□□□□ -1.64
SNF8	YPL002C	TIM23	P32897	222 aa		4.8	□□□□□ -1.64
SNF8	YPL002C	SAP190	P36123	1033 aa		4.8	□□□□□ -1.64
SNF8	YPL002C	BET3	P36149	193 aa		4.8	□□□□□ -1.64
SNF8	YPL002C	YHR020W	P38708	688 aa	Known RBP	4.8	□□□□□ -1.64
SNF8	YPL002C	FPR3	P38911	411 aa	Known RBP	4.8	□□□□□ -1.64
SNF8	YPL002C	TIM54	P47045	478 aa		4.8	□□□□□ -1.64
SNF8	YPL002C	SGM1	P47166	707 aa		4.8	□□□□□ -1.64
SNF8	YPL002C	ENP2	P48234	707 aa	Known RBP	4.8	□□□□□ -1.64
SNF8	YPL002C	ISA1	Q07821	250 aa	Predicted RBP	4.8	□□□□□ -1.64
SNF8	YPL002C	MYO1	P08964	1928 aa		4.8	□□□□□ -1.64
SNF8	YPL002C	IRA2	P19158	3079 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	TOM70	P07213	617 aa	Known RBP	4.79	□□□□□ -1.64
SNF8	YPL002C	POX1	P13711	748 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
SNF8	YPL002C	TFC4	P33339	1025 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	SIC1	P38634	284 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	ALD5	P40047	520 aa	Known RBP	4.79	□□□□□ -1.64
SNF8	YPL002C	HOS4	P40480	1083 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	TAH11	P47112	604 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	VPS73	P53142	486 aa	Known RBP	4.79	□□□□□ -1.64
SNF8	YPL002C	VPS72	Q03388	795 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	SKG3	Q06315	1026 aa		4.79	□□□□□ -1.64
SNF8	YPL002C	SWI6	P09959	803 aa		4.78	□□□□□ -1.64
SNF8	YPL002C	SAM1	P10659	382 aa	Known RBP	4.78	□□□□□ -1.64
SNF8	YPL002C	SNA3	P14359	133 aa		4.78	□□□□□ -1.64
SNF8	YPL002C	YUR1	P26725	428 aa		4.78	□□□□□ -1.64
SNF8	YPL002C	HIS7	P33734	552 aa	Known RBP	4.78	□□□□□ -1.64
SNF8	YPL002C	EBP2	P36049	427 aa	Known RBP	4.78	□□□□□ -1.64
SNF8	YPL002C	BCD1	P38772	366 aa		4.78	□□□□□ -1.64
SNF8	YPL002C	SET5	P38890	526 aa	Known RBP	4.78	□□□□□ -1.64
SNF8	YPL002C	RTA1	P53047	317 aa		4.78	□□□□□ -1.64
SNF8	YPL002C	DAM1	P53267	343 aa		4.78	□□□□□ -1.64
SNF8	YPL002C	MRD1	Q06106	887 aa	Known RBP	4.78	□□□□□ -1.64
SNF8	YPL002C	NDJ1	Q12366	352 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms