RNA–Protein interactions for RNA: YOL071W

SDH5, Transcript of Protein required for flavinylation of Sdh1p, yeast

Gene SDH5, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH5	YOL071W	RTT101	P47050	842 aa		10.16	□□□□□ -0.78
SDH5	YOL071W	YGR021W	P53212	290 aa		10.16	□□□□□ -0.78
SDH5	YOL071W	COP1	P53622	1201 aa	Known RBP	10.16	□□□□□ -0.78
SDH5	YOL071W	YDR222W	Q04925	415 aa		10.16	□□□□□ -0.78
SDH5	YOL071W	RTN1	Q04947	295 aa	Known RBP	10.16	□□□□□ -0.78
SDH5	YOL071W	SAM3	Q08986	587 aa		10.16	□□□□□ -0.78
SDH5	YOL071W	VPS5	Q92331	675 aa		10.16	□□□□□ -0.78
SDH5	YOL071W	YPK1	P12688	680 aa	Known RBP	10.15	□□□□□ -0.78
SDH5	YOL071W	FPR1	P20081	114 aa	Known RBP	10.15	□□□□□ -0.78
SDH5	YOL071W	SEC1	P30619	724 aa	Known RBP	10.15	□□□□□ -0.78
SDH5	YOL071W	JNM1	P36224	373 aa		10.15	□□□□□ -0.78
SDH5	YOL071W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	10.15	□□□□□ -0.78	not detected
SDH5	YOL071W	PEX31	P53203	462 aa		10.15	□□□□□ -0.78
SDH5	YOL071W	ERG5	P54781	538 aa		10.15	□□□□□ -0.78
SDH5	YOL071W	PIR3	Q03180	325 aa		10.15	□□□□□ -0.78
SDH5	YOL071W	SPG3	Q04398	127 aa	Predicted RBP	10.15	□□□□□ -0.78
SDH5	YOL071W	THI20	Q08224	551 aa		10.15	□□□□□ -0.78
SDH5	YOL071W	MEX67	Q99257	599 aa	Known RBP	10.15	□□□□□ -0.78
SDH5	YOL071W	CET1	O13297	549 aa	Predicted RBP	10.14	□□□□□ -0.79
SDH5	YOL071W	PDR1	P12383	1068 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	HOM2	P13663	365 aa	Known RBP	10.14	□□□□□ -0.79
SDH5	YOL071W	CYC8	P14922	966 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	VMA4	P22203	233 aa	Known RBP	10.14	□□□□□ -0.79
SDH5	YOL071W	KIN3	P22209	435 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	ABD1	P32783	436 aa	Predicted RBP	10.14	□□□□□ -0.79
SDH5	YOL071W	MED6	P38782	295 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	RTT107	P38850	1070 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	UTP5	Q04177	643 aa	Known RBP	10.14	□□□□□ -0.79
SDH5	YOL071W	YCG1	Q06680	1035 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	CLP1	Q08685	445 aa	Predicted RBP	10.14	□□□□□ -0.79
SDH5	YOL071W	EMP46	Q12396	444 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	ARP7	Q12406	477 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	FAB1	P34756	2278 aa		10.14	□□□□□ -0.79
SDH5	YOL071W	SPO12	P17123	173 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	SPC110	P32380	944 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	ECM32	P32644	1121 aa	Known RBP	10.13	□□□□□ -0.79
SDH5	YOL071W	SWE1	P32944	819 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	CBR1	P38626	284 aa	Known RBP	10.13	□□□□□ -0.79
SDH5	YOL071W	PMC1	P38929	1173 aa	Predicted RBP	10.13	□□□□□ -0.79
SDH5	YOL071W	HEM14	P40012	539 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	YJR079W	P47126	109 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	STR2	P47164	639 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	YMR018W	Q04364	514 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	ATG9	Q12142	997 aa		10.13	□□□□□ -0.79
SDH5	YOL071W	GYP6	P32806	458 aa		10.12	□□□□□ -0.79
SDH5	YOL071W	YKL050C	P35736	922 aa		10.12	□□□□□ -0.79
SDH5	YOL071W	FUI1	P38196	639 aa		10.12	□□□□□ -0.79
SDH5	YOL071W	HSL7	P38274	827 aa		10.12	□□□□□ -0.79
SDH5	YOL071W	PRM9	P39551	298 aa		10.12	□□□□□ -0.79
SDH5	YOL071W	YNL247W	P53852	767 aa	Known RBP	10.12	□□□□□ -0.79
SDH5	YOL071W	GRX8	Q05926	109 aa		10.12	□□□□□ -0.79
SDH5	YOL071W	DAS2	Q12084	232 aa		10.12	□□□□□ -0.79
SDH5	YOL071W	YIH1	P25637	258 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	RRN6	P32786	894 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	SEG2	P34250	1132 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	SPT23	P35210	1082 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	BLI1	P35727	113 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	MIC60	P36112	540 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	SWC5	P38326	303 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	SPC72	P39723	622 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	RMD8	P43620	662 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	YNR061C	P53747	219 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	SND1	Q04007	877 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	AAD4	Q07747	329 aa		10.11	□□□□□ -0.79
SDH5	YOL071W	TOR2	P32600	2474 aa	Known RBP	10.11	□□□□□ -0.79
SDH5	YOL071W	HXT1	P32465	570 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	CSE1	P33307	960 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	EBP2	P36049	427 aa	Known RBP	10.1	□□□□□ -0.79
SDH5	YOL071W	DUN1	P39009	513 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	OSW5	P40219	148 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	ATG3	P40344	310 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	NUP84	P52891	726 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	COQ6	P53318	479 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	YNR065C	P53751	1116 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	ALF1	P53904	254 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	CTR9	P89105	1077 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	ATG16	Q03818	150 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	YLR012C	Q07927	99 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	SIL1	Q08199	421 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	YOR387C	Q08910	206 aa		10.1	□□□□□ -0.79
SDH5	YOL071W	TYE7	P33122	291 aa	Predicted RBP	10.09	□□□□□ -0.79
SDH5	YOL071W	LAM1	P38851	1228 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	ERP2	P39704	215 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	EXO1	P39875	702 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	VAC8	P39968	578 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	TMN3	P40071	706 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	YER189W	P40104	122 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	SAP185	P40856	1058 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	ERG10	P41338	398 aa	Known RBP	10.09	□□□□□ -0.79
SDH5	YOL071W	FLC3	P53121	802 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	YGR283C	P53336	341 aa	Predicted RBP	10.09	□□□□□ -0.79
SDH5	YOL071W	KTR6	P54070	446 aa		10.09	□□□□□ -0.79
SDH5	YOL071W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	10.09	□□□□□ -0.79	RIP-Chip
SDH5	YOL071W	YOR059C	Q08448	450 aa	Known RBP	10.09	□□□□□ -0.79
SDH5	YOL071W	SEC23	P15303	768 aa	Known RBP	10.08	□□□□□ -0.8
SDH5	YOL071W	SEC6	P32844	805 aa		10.08	□□□□□ -0.8
SDH5	YOL071W	CRP1	P38845	465 aa	Known RBP	10.08	□□□□□ -0.8
SDH5	YOL071W	YIL054W	P40524	105 aa		10.08	□□□□□ -0.8
SDH5	YOL071W	FAA4	P47912	694 aa	Known RBP	10.08	□□□□□ -0.8
SDH5	YOL071W	YMR206W	Q03695	313 aa		10.08	□□□□□ -0.8

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