RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YLR001CQ07895 862 aa1.91□□□□□ -2.1
RTP1YMR185W NOC3Q07896 663 aaPredicted RBP1.91□□□□□ -2.1
RTP1YMR185W AIM41Q12032 185 aa1.91□□□□□ -2.1
RTP1YMR185W TY1A-GR1Q12085 440 aa1.91□□□□□ -2.1
RTP1YMR185W ZRT2Q12436 422 aa1.91□□□□□ -2.1
RTP1YMR185W OCA6Q12454 224 aa1.91□□□□□ -2.1
RTP1YMR185W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W TY1A-OLQ92392 440 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W YEL076C-AP0CX16 216 aa1.91□□□□□ -2.1
RTP1YMR185W YLR464WP0CX17 216 aa1.91□□□□□ -2.1
RTP1YMR185W GCD2P12754 651 aaPredicted RBP1.91□□□□□ -2.1
RTP1YMR185W SNA3P14359 133 aa1.91□□□□□ -2.1
RTP1YMR185W RIT1P23796 513 aa1.91□□□□□ -2.1
RTP1YMR185W DPH5P32469 300 aaPredicted RBP1.91□□□□□ -2.1
RTP1YMR185W SER1P33330 395 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W SAS3P34218 831 aa1.91□□□□□ -2.1
RTP1YMR185W RPC25P35718 212 aa1.91□□□□□ -2.1
RTP1YMR185W MRP8P35719 219 aa1.91□□□□□ -2.1
RTP1YMR185W RPC37P36121 282 aa1.91□□□□□ -2.1
RTP1YMR185W PET10P36139 283 aa1.91□□□□□ -2.1
RTP1YMR185W YBR032WP38223 100 aa1.91□□□□□ -2.1
RTP1YMR185W PIH1P38768 344 aa1.91□□□□□ -2.1
RTP1YMR185W YEL076CP39971 216 aa1.91□□□□□ -2.1
RTP1YMR185W SEC26P41810 973 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W YFH7P43591 353 aa1.91□□□□□ -2.1
RTP1YMR185W TAF1P46677 1066 aa1.91□□□□□ -2.1
RTP1YMR185W ASE1P50275 885 aa1.91□□□□□ -2.1
RTP1YMR185W TAF6P53040 516 aa1.91□□□□□ -2.1
RTP1YMR185W RIM8P53179 542 aa1.91□□□□□ -2.1
RTP1YMR185W SNU71P53207 620 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W YNL040WP53960 456 aaPredicted RBP1.91□□□□□ -2.1
RTP1YMR185W ASI1P54074 624 aa1.91□□□□□ -2.1
RTP1YMR185W ALD6P54115 500 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W MFM1Q02783 413 aa1.91□□□□□ -2.1
RTP1YMR185W YPL109CQ02981 657 aa1.91□□□□□ -2.1
RTP1YMR185W SPO19Q03029 223 aa1.91□□□□□ -2.1
RTP1YMR185W DIG1Q03063 452 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W HMO1Q03973 246 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W CSM3Q04659 317 aa1.91□□□□□ -2.1
RTP1YMR185W YLR297WQ05899 129 aa1.91□□□□□ -2.1
RTP1YMR185W ORM2Q06144 216 aa1.91□□□□□ -2.1
RTP1YMR185W SKG3Q06315 1026 aa1.91□□□□□ -2.1
RTP1YMR185W VIP1Q06685 1146 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W RLP24Q07915 199 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W LAP2Q10740 671 aa1.91□□□□□ -2.1
RTP1YMR185W FAL1Q12099 399 aaKnown RBP1.91□□□□□ -2.1
RTP1YMR185W MED1Q12321 566 aa1.91□□□□□ -2.1
RTP1YMR185W FLP1P03870 423 aa1.9□□□□□ -2.1
RTP1YMR185W ADE3P07245 946 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W PCK1P10963 549 aa1.9□□□□□ -2.1
RTP1YMR185W CAP1P28495 268 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W SIN4P32259 974 aa1.9□□□□□ -2.1
RTP1YMR185W VPH2P32341 215 aa1.9□□□□□ -2.1
RTP1YMR185W MVD1P32377 396 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W FRD1P32614 470 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W TFC4P33339 1025 aa1.9□□□□□ -2.1
RTP1YMR185W DUR3P33413 735 aa1.9□□□□□ -2.1
RTP1YMR185W YBL055CP34220 418 aaPredicted RBP1.9□□□□□ -2.1
RTP1YMR185W PTK1P36002 662 aaPredicted RBP1.9□□□□□ -2.1
RTP1YMR185W HSM3P38348 480 aa1.9□□□□□ -2.1
RTP1YMR185W SPC72P39723 622 aa1.9□□□□□ -2.1
RTP1YMR185W LCP5P40079 357 aaPredicted RBP1.9□□□□□ -2.1
RTP1YMR185W DOT5P40553 215 aa1.9□□□□□ -2.1
RTP1YMR185W IAH1P41734 238 aa1.9□□□□□ -2.1
RTP1YMR185W GCN20P43535 752 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W POL31P46957 487 aa1.9□□□□□ -2.1
RTP1YMR185W PIP2P52960 996 aa1.9□□□□□ -2.1
RTP1YMR185W PCL10P53124 433 aa1.9□□□□□ -2.1
RTP1YMR185W ZPR1P53303 486 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W SLT2Q00772 484 aa1.9□□□□□ -2.1
RTP1YMR185W SEN54Q02825 467 aaPredicted RBP1.9□□□□□ -2.1
RTP1YMR185W BUL2Q03758 920 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W FMN1Q03778 218 aa1.9□□□□□ -2.1
RTP1YMR185W GTB1Q04924 702 aa1.9□□□□□ -2.1
RTP1YMR185W CSR1Q06705 408 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
RTP1YMR185W OSW1Q08692 278 aa1.9□□□□□ -2.1
RTP1YMR185W YPL260WQ08977 551 aa1.9□□□□□ -2.1
RTP1YMR185W LPX1Q12405 387 aaKnown RBP1.9□□□□□ -2.1
RTP1YMR185W YLR462WO13556 202 aa1.9□□□□□ -2.11
RTP1YMR185W NAT1P12945 854 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W STI1P15705 589 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
RTP1YMR185W HEM15P16622 393 aa1.9□□□□□ -2.11
RTP1YMR185W SFL1P20134 766 aa1.9□□□□□ -2.11
RTP1YMR185W BAS1P22035 811 aa1.9□□□□□ -2.11
RTP1YMR185W RPL8BP29453 256 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W RAD16P31244 790 aa1.9□□□□□ -2.11
RTP1YMR185W PRO3P32263 286 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W STE13P33894 931 aa1.9□□□□□ -2.11
RTP1YMR185W JNM1P36224 373 aa1.9□□□□□ -2.11
RTP1YMR185W FLR1P38124 548 aa1.9□□□□□ -2.11
RTP1YMR185W YBR062CP38239 180 aa1.9□□□□□ -2.11
RTP1YMR185W YHL049CP38722 271 aa1.9□□□□□ -2.11
RTP1YMR185W END3P39013 349 aa1.9□□□□□ -2.11
RTP1YMR185W PEX7P39108 375 aa1.9□□□□□ -2.11
RTP1YMR185W TIF4631P39935 952 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W YEL075CP39972 122 aa1.9□□□□□ -2.11
RTP1YMR185W KAP123P40069 1113 aaKnown RBP1.9□□□□□ -2.11
RTP1YMR185W YER189WP40104 122 aa1.9□□□□□ -2.11
RTP1YMR185W SLS1P42900 643 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 124.2 ms