RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W VBA4Q04602 768 aaKnown RBP3.3□□□□□ -1.88
SEC22YLR268W YDL073WQ07454 984 aa3.3□□□□□ -1.88
SEC22YLR268W DCS2Q12123 353 aa3.3□□□□□ -1.88
SEC22YLR268W YOL098CQ12496 1037 aa3.3□□□□□ -1.88
SEC22YLR268W YOR111WQ99210 232 aa3.3□□□□□ -1.88
SEC22YLR268W PRP22P24384 1145 aaKnown RBP3.29□□□□□ -1.88
SEC22YLR268W GSY2P27472 705 aa3.29□□□□□ -1.88
SEC22YLR268W GCS1P35197 352 aa3.29□□□□□ -1.88
SEC22YLR268W MAF1P41910 395 aa3.29□□□□□ -1.88
SEC22YLR268W BST1P43571 1029 aa3.29□□□□□ -1.88
SEC22YLR268W YIP4P53093 235 aa3.29□□□□□ -1.88
SEC22YLR268W COQ6P53318 479 aa3.29□□□□□ -1.88
SEC22YLR268W YNL018CP53976 612 aa3.29□□□□□ -1.88
SEC22YLR268W ORC1P54784 914 aaPredicted RBP3.29□□□□□ -1.88
SEC22YLR268W BSP1Q06604 576 aa3.29□□□□□ -1.88
SEC22YLR268W ERR1P0CX10 437 aa3.28□□□□□ -1.88
SEC22YLR268W ERR2P0CX11 437 aa3.28□□□□□ -1.88
SEC22YLR268W WHI2P12611 486 aa3.28□□□□□ -1.88
SEC22YLR268W YKL091CP33324 310 aaKnown RBP3.28□□□□□ -1.88
SEC22YLR268W BEM4P39011 633 aa3.28□□□□□ -1.88
SEC22YLR268W NUG1P40010 520 aaKnown RBP3.28□□□□□ -1.88
SEC22YLR268W CEF1Q03654 590 aaPredicted RBP3.28□□□□□ -1.88
SEC22YLR268W ATG33Q06485 197 aa3.28□□□□□ -1.88
SEC22YLR268W YLR125WQ12138 136 aa3.28□□□□□ -1.88
SEC22YLR268W CRC1Q12289 327 aa3.28□□□□□ -1.88
SEC22YLR268W YPR089WO13585 888 aa3.27□□□□□ -1.89
SEC22YLR268W URE2P23202 354 aaKnown RBP3.27□□□□□ -1.89
SEC22YLR268W MEF1P25039 761 aa3.27□□□□□ -1.89
SEC22YLR268W YJL043WP47053 257 aa3.27□□□□□ -1.89
SEC22YLR268W HMG1P12683 1054 aa3.26□□□□□ -1.89
SEC22YLR268W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SEC22YLR268W IMG2P25642 146 aaPredicted RBP3.26□□□□□ -1.89
SEC22YLR268W CNE1P27825 502 aa3.26□□□□□ -1.89
SEC22YLR268W YKR075CP36155 307 aa3.26□□□□□ -1.89
SEC22YLR268W MAL31P38156 614 aa3.26□□□□□ -1.89
SEC22YLR268W EXO1P39875 702 aa3.26□□□□□ -1.89
SEC22YLR268W BFA1P47113 574 aa3.26□□□□□ -1.89
SEC22YLR268W SPO1P53541 631 aa3.26□□□□□ -1.89
SEC22YLR268W FDC1Q03034 503 aa3.26□□□□□ -1.89
SEC22YLR268W YLR111WQ12528 110 aa3.26□□□□□ -1.89
SEC22YLR268W YAP1P19880 650 aaKnown RBP3.25□□□□□ -1.89
SEC22YLR268W IME1P21190 360 aa3.25□□□□□ -1.89
SEC22YLR268W TIM23P32897 222 aa3.25□□□□□ -1.89
SEC22YLR268W MRPL7P36519 292 aa3.25□□□□□ -1.89
SEC22YLR268W YAT2P40017 923 aa3.25□□□□□ -1.89
SEC22YLR268W RCR2Q03446 210 aaKnown RBP3.25□□□□□ -1.89
SEC22YLR268W RPN4Q03465 531 aa3.25□□□□□ -1.89
SEC22YLR268W EFR3Q03653 782 aaKnown RBP3.25□□□□□ -1.89
SEC22YLR268W MRPL1Q04599 285 aa3.25□□□□□ -1.89
SEC22YLR268W SPN1Q06505 410 aaPredicted RBP3.25□□□□□ -1.89
SEC22YLR268W RDL1Q12305 139 aaKnown RBP3.25□□□□□ -1.89
SEC22YLR268W PHO8P11491 566 aa3.24□□□□□ -1.89
SEC22YLR268W PCL2P25693 308 aa3.24□□□□□ -1.89
SEC22YLR268W MGM1P32266 881 aa3.24□□□□□ -1.89
SEC22YLR268W PEX6P33760 1030 aa3.24□□□□□ -1.89
SEC22YLR268W PCM1P38628 557 aaKnown RBP3.24□□□□□ -1.89
SEC22YLR268W PPE1P38796 400 aa3.24□□□□□ -1.89
SEC22YLR268W TMN3P40071 706 aa3.24□□□□□ -1.89
SEC22YLR268W NUP82P40368 713 aa3.24□□□□□ -1.89
SEC22YLR268W OPT1P40897 799 aa3.24□□□□□ -1.89
SEC22YLR268W BUD17P53727 317 aa3.24□□□□□ -1.89
SEC22YLR268W MFM1Q02783 413 aa3.24□□□□□ -1.89
SEC22YLR268W UGO1Q03327 502 aa3.24□□□□□ -1.89
SEC22YLR268W PPN1Q04119 674 aa3.24□□□□□ -1.89
SEC22YLR268W GFD1Q04839 188 aaKnown RBP3.24□□□□□ -1.89
SEC22YLR268W YPL216WQ08964 1102 aa3.24□□□□□ -1.89
SEC22YLR268W YER190C-BP0CX94 160 aa3.23□□□□□ -1.89
SEC22YLR268W YEL077W-AP0CX95 160 aa3.23□□□□□ -1.89
SEC22YLR268W YGR296C-BP0CX96 160 aa3.23□□□□□ -1.89
SEC22YLR268W YPL283W-BP0CX97 160 aa3.23□□□□□ -1.89
SEC22YLR268W YPR204C-AP0CX98 160 aa3.23□□□□□ -1.89
SEC22YLR268W NOP1P15646 327 aaKnown RBP3.23□□□□□ -1.89
SEC22YLR268W THI4P32318 326 aa3.23□□□□□ -1.89
SEC22YLR268W YKU70P32807 602 aa3.23□□□□□ -1.89
SEC22YLR268W PBP2P38151 413 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
SEC22YLR268W YMR124WP39523 943 aaKnown RBP3.23□□□□□ -1.89
SEC22YLR268W OAF1P39720 1047 aaPredicted RBP3.23□□□□□ -1.89
SEC22YLR268W PXA1P41909 870 aa3.23□□□□□ -1.89
SEC22YLR268W YFL015CP43578 164 aa3.23□□□□□ -1.89
SEC22YLR268W OSW7P43611 510 aa3.23□□□□□ -1.89
SEC22YLR268W AIM14P53109 570 aa3.23□□□□□ -1.89
SEC22YLR268W RPS15Q01855 142 aaKnown RBP3.23□□□□□ -1.89
SEC22YLR268W YMR210WQ03649 449 aa3.23□□□□□ -1.89
SEC22YLR268W HLR1Q04429 423 aa3.23□□□□□ -1.89
SEC22YLR268W ENT2Q05785 613 aa3.23□□□□□ -1.89
SEC22YLR268W GIN4Q12263 1142 aa3.23□□□□□ -1.89
SEC22YLR268W LOT5P34234 306 aa3.22□□□□□ -1.89
SEC22YLR268W CFD1P40558 293 aa3.22□□□□□ -1.89
SEC22YLR268W BUD8P41698 603 aa3.22□□□□□ -1.89
SEC22YLR268W TDA10P42938 290 aa3.22□□□□□ -1.89
SEC22YLR268W POB3Q04636 552 aaKnown RBP3.22□□□□□ -1.89
SEC22YLR268W BUD7Q08754 746 aa3.22□□□□□ -1.89
SEC22YLR268W HER1Q12276 1246 aa3.22□□□□□ -1.89
SEC22YLR268W SEC3P33332 1336 aaKnown RBP3.21□□□□□ -1.89
SEC22YLR268W HOP1P20050 605 aa3.21□□□□□ -1.9
SEC22YLR268W MSH2P25847 964 aa3.21□□□□□ -1.9
SEC22YLR268W ENP2P48234 707 aaKnown RBP3.21□□□□□ -1.9
SEC22YLR268W YGR054WP53235 642 aaKnown RBP3.21□□□□□ -1.9
SEC22YLR268W YLR407WQ06070 228 aa3.21□□□□□ -1.9
SEC22YLR268W SRL1Q08673 210 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms