RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B ATG9Q12142 997 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B GET3Q12154 354 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B PDA1P16387 420 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B SEC6P32844 805 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B YHR045WP38775 560 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B BZZ1P38822 633 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B NAF1P53919 492 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B YLR297WQ05899 129 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B HIM1Q06674 414 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B GAL80P04387 435 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B SIR1P21691 654 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B RSA4P25382 515 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B BCK2P33306 851 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B VID24P38263 362 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B PHO88P38264 188 aaPredicted RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B CCT7P42943 550 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B MNN10P50108 393 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B SMC6Q12749 1114 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-HO13535 1793 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-DR5P0C2I2 1755 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-DR6P0C2I3 1755 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-LR2P0C2I5 1755 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-LR3P0C2I6 1755 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-PR1P0C2I9 1755 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-PR2P0C2J0 1756 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-PR3P0C2J1 1755 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-JR1P47098 1755 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-ML2Q03434 1755 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-ER1Q03612 1755 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-ML1Q04711 1755 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-GR2Q12269 1755 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-OLQ12273 1755 aa3.67□□□□□ -1.82
YLR227W-BYLR227W-B TY1B-PLQ12414 1755 aaKnown RBP3.67□□□□□ -1.82
YLR227W-BYLR227W-B PHO2P07269 559 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B STE5P32917 917 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B SIP3P38717 1229 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B GPI16P38875 610 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B DPH1P40487 425 aaKnown RBP3.66□□□□□ -1.82
YLR227W-BYLR227W-B YJL107CP42947 387 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B TAZ1Q06510 381 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B ENT4Q07872 247 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B PLC1P32383 869 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B DUG2P38149 878 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B EHT1P38295 451 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B NMD5P46970 1048 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B ALT1P52893 592 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B FAR11P53917 953 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B ECM38Q05902 660 aaPredicted RBP3.66□□□□□ -1.82
YLR227W-BYLR227W-B DUS3Q06053 668 aaKnown RBP3.66□□□□□ -1.82
YLR227W-BYLR227W-B RGT2Q12300 763 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B TRS33Q99394 268 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B CYS4P32582 507 aaKnown RBP3.66□□□□□ -1.82
YLR227W-BYLR227W-B TSC10P38342 320 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B SUL1P38359 859 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B KIP1P28742 1111 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B YHI9P38765 294 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B DOT6P40059 670 aaKnown RBP3.66□□□□□ -1.82
YLR227W-BYLR227W-B PSY2P40164 858 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B MDJ2P42834 146 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B YJL132WP47014 750 aa3.66□□□□□ -1.82
YLR227W-BYLR227W-B NAM8Q00539 523 aaKnown RBP3.66□□□□□ -1.82
YLR227W-BYLR227W-B IME1P21190 360 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B FUN30P31380 1131 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B APD1P38281 316 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B KHA1P40309 873 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B ORC4P54791 529 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B CTR9P89105 1077 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B NUP116Q02630 1113 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B MRP4P32902 394 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B CAB3P36076 571 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B YFL034WP43564 1073 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B RPS0BP46654 252 aaKnown RBP3.65□□□□□ -1.82
YLR227W-BYLR227W-B ESA1Q08649 445 aa3.65□□□□□ -1.82
YLR227W-BYLR227W-B SHM1P37292 490 aaPredicted RBP3.65□□□□□ -1.83
YLR227W-BYLR227W-B SLX1P38324 304 aa3.65□□□□□ -1.83
YLR227W-BYLR227W-B YER188WP40103 239 aa3.65□□□□□ -1.83
YLR227W-BYLR227W-B MAK11P20484 414 aaKnown RBP3.65□□□□□ -1.83
YLR227W-BYLR227W-B VPS52P39904 641 aa3.65□□□□□ -1.83
YLR227W-BYLR227W-B RSC4Q02206 625 aa3.65□□□□□ -1.83
YLR227W-BYLR227W-B VPS16Q03308 798 aa3.65□□□□□ -1.83
YLR227W-BYLR227W-B STE20Q03497 939 aaKnown RBP3.65□□□□□ -1.83
YLR227W-BYLR227W-B SGO1Q08490 590 aa3.65□□□□□ -1.83
YLR227W-BYLR227W-B RRP36Q12481 300 aaPredicted RBP3.65□□□□□ -1.83
YLR227W-BYLR227W-B MSF1P08425 469 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B EFT1P32324 842 aaKnown RBP3.64□□□□□ -1.83
YLR227W-BYLR227W-B MFT1P33441 392 aaKnown RBP3.64□□□□□ -1.83
YLR227W-BYLR227W-B STB6P36085 766 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B OCA5P38738 679 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B HOC1P47124 396 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B RPS7BP48164 190 aaKnown RBP3.64□□□□□ -1.83
YLR227W-BYLR227W-B GTR1Q00582 310 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B RPN4Q03465 531 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B ARX1Q03862 593 aaKnown RBP3.64□□□□□ -1.83
YLR227W-BYLR227W-B ECI1Q05871 280 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B ASF1P32447 279 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B CCT5P40413 562 aaKnown RBP3.64□□□□□ -1.83
YLR227W-BYLR227W-B ZAP1P47043 880 aa3.64□□□□□ -1.83
YLR227W-BYLR227W-B PRP3Q03338 469 aaPredicted RBP3.64□□□□□ -1.83
YLR227W-BYLR227W-B LYS21Q12122 440 aaKnown RBP3.64□□□□□ -1.83
YLR227W-BYLR227W-B SPC110P32380 944 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms