RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W DGR2P32330 852 aa1.68□□□□□ -2.14
SLX4YLR135W TGL1P34163 548 aa1.68□□□□□ -2.14
SLX4YLR135W LYS9P38999 446 aa1.68□□□□□ -2.14
SLX4YLR135W CCT3P39077 534 aaKnown RBP1.68□□□□□ -2.14
SLX4YLR135W NUP60P39705 539 aa1.68□□□□□ -2.14
SLX4YLR135W ACA1P39970 489 aa1.68□□□□□ -2.14
SLX4YLR135W EAF5P39995 279 aa1.68□□□□□ -2.14
SLX4YLR135W ELO3P40319 345 aa1.68□□□□□ -2.14
SLX4YLR135W PRM2P40534 656 aa1.68□□□□□ -2.14
SLX4YLR135W HIS6P40545 261 aa1.68□□□□□ -2.14
SLX4YLR135W SAP185P40856 1058 aa1.68□□□□□ -2.14
SLX4YLR135W MAD2P40958 196 aa1.68□□□□□ -2.14
SLX4YLR135W FDC1Q03034 503 aa1.68□□□□□ -2.14
SLX4YLR135W DLT1Q04216 342 aa1.68□□□□□ -2.14
SLX4YLR135W SGO1Q08490 590 aa1.68□□□□□ -2.14
SLX4YLR135W NUR1Q12066 484 aa1.68□□□□□ -2.14
SLX4YLR135W CLF1Q12309 687 aaPredicted RBP1.68□□□□□ -2.14
SLX4YLR135W SIR3P06701 978 aa1.67□□□□□ -2.14
SLX4YLR135W HMG2P12684 1045 aa1.67□□□□□ -2.14
SLX4YLR135W CAF20P12962 161 aaKnown RBP1.67□□□□□ -2.14
SLX4YLR135W PHO81P17442 1178 aa1.67□□□□□ -2.14
SLX4YLR135W TRX2P22803 104 aaKnown RBP1.67□□□□□ -2.14
SLX4YLR135W CAD1P24813 409 aaKnown RBP1.67□□□□□ -2.14
SLX4YLR135W ERG6P25087 383 aaKnown RBP1.67□□□□□ -2.14
SLX4YLR135W MRS6P32864 603 aaKnown RBP1.67□□□□□ -2.14
SLX4YLR135W FMO1P38866 432 aa1.67□□□□□ -2.14
SLX4YLR135W NAB3P38996 802 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SLX4YLR135W YIL092WP40497 633 aa1.67□□□□□ -2.14
SLX4YLR135W FKH2P41813 862 aa1.67□□□□□ -2.14
SLX4YLR135W MTL1P53214 551 aa1.67□□□□□ -2.14
SLX4YLR135W YNR071CP53757 342 aa1.67□□□□□ -2.14
SLX4YLR135W TEP1P53916 434 aa1.67□□□□□ -2.14
SLX4YLR135W DIA2Q08496 732 aaPredicted RBP1.67□□□□□ -2.14
SLX4YLR135W RTK1Q12100 620 aaPredicted RBP1.67□□□□□ -2.14
SLX4YLR135W NKP1Q12493 238 aa1.67□□□□□ -2.14
SLX4YLR135W ECM3Q99252 613 aa1.67□□□□□ -2.14
SLX4YLR135W VAS1P07806 1104 aaKnown RBP1.67□□□□□ -2.14
SLX4YLR135W MSM1P22438 575 aa1.67□□□□□ -2.14
SLX4YLR135W PRP28P23394 588 aa1.67□□□□□ -2.14
SLX4YLR135W CDS1P38221 457 aa1.67□□□□□ -2.14
SLX4YLR135W SWD1P39706 426 aa1.67□□□□□ -2.14
SLX4YLR135W YNL195CP40168 261 aa1.67□□□□□ -2.14
SLX4YLR135W RPT2P40327 437 aaKnown RBP1.67□□□□□ -2.14
SLX4YLR135W IMA5P40884 581 aa1.67□□□□□ -2.14
SLX4YLR135W YJL163CP46996 555 aa1.67□□□□□ -2.14
SLX4YLR135W YDL183CP48569 320 aa1.67□□□□□ -2.14
SLX4YLR135W UBC11P52492 156 aa1.67□□□□□ -2.14
SLX4YLR135W CIA1Q05583 330 aa1.67□□□□□ -2.14
SLX4YLR135W YDL121CQ07541 149 aa1.67□□□□□ -2.14
SLX4YLR135W DIN7Q12086 430 aa1.67□□□□□ -2.14
SLX4YLR135W RPS9BP05755 195 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W ADH4P10127 382 aa1.66□□□□□ -2.14
SLX4YLR135W APA1P16550 321 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W EFT1P32324 842 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W DEF1P35732 738 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W YHR033WP38690 423 aa1.66□□□□□ -2.14
SLX4YLR135W BCD1P38772 366 aa1.66□□□□□ -2.14
SLX4YLR135W CRG1P38892 291 aaRIP-Chip data1.66□□□□□ -2.14not detected
SLX4YLR135W FMP52P40008 231 aa1.66□□□□□ -2.14
SLX4YLR135W SCS2P40075 244 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W FTR1P40088 404 aa1.66□□□□□ -2.14
SLX4YLR135W MUP1P50276 574 aa1.66□□□□□ -2.14
SLX4YLR135W COX18P53239 316 aa1.66□□□□□ -2.14
SLX4YLR135W FHN1P53279 174 aa1.66□□□□□ -2.14
SLX4YLR135W CPR6P53691 371 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W RNT1Q02555 471 aa1.66□□□□□ -2.14
SLX4YLR135W SVL3Q03088 825 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W VPS72Q03388 795 aa1.66□□□□□ -2.14
SLX4YLR135W ADY4Q05955 493 aa1.66□□□□□ -2.14
SLX4YLR135W YCG1Q06680 1035 aa1.66□□□□□ -2.14
SLX4YLR135W AIM41Q12032 185 aa1.66□□□□□ -2.14
SLX4YLR135W DBP10Q12389 995 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W CBP3P21560 335 aa1.66□□□□□ -2.14
SLX4YLR135W SIR1P21691 654 aa1.66□□□□□ -2.14
SLX4YLR135W FEN2P25621 512 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W DBF20P32328 564 aa1.66□□□□□ -2.14
SLX4YLR135W MSS1P32559 526 aaPredicted RBP1.66□□□□□ -2.14
SLX4YLR135W FRD1P32614 470 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W BCS1P32839 456 aa1.66□□□□□ -2.14
SLX4YLR135W APM3P38153 483 aa1.66□□□□□ -2.14
SLX4YLR135W COS111P38308 924 aa1.66□□□□□ -2.14
SLX4YLR135W STT3P39007 718 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W PIG2P40187 538 aa1.66□□□□□ -2.14
SLX4YLR135W VPS27P40343 622 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W MAD3P47074 515 aa1.66□□□□□ -2.14
SLX4YLR135W TAH11P47112 604 aa1.66□□□□□ -2.14
SLX4YLR135W YAP1802P53309 568 aa1.66□□□□□ -2.14
SLX4YLR135W SQS1P53866 767 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W MOT3P54785 490 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W YFT2Q06676 274 aa1.66□□□□□ -2.14
SLX4YLR135W CRD1Q07560 283 aa1.66□□□□□ -2.14
SLX4YLR135W BUD21Q08492 214 aaPredicted RBP1.66□□□□□ -2.14
SLX4YLR135W CHS5Q12114 671 aaKnown RBP1.66□□□□□ -2.14
SLX4YLR135W YKL033W-AQ86ZR7 236 aa1.66□□□□□ -2.14
SLX4YLR135W URA3P03962 267 aa1.65□□□□□ -2.15
SLX4YLR135W PPR1P07272 904 aaPredicted RBP1.65□□□□□ -2.15
SLX4YLR135W MTF2P10849 440 aa1.65□□□□□ -2.15
SLX4YLR135W BIK1P11709 440 aa1.65□□□□□ -2.15
SLX4YLR135W SEC15P22224 910 aa1.65□□□□□ -2.15
SLX4YLR135W ARG1P22768 420 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms