RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS1	YLR120C	RRD1	P40454	393 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	SAE2	P46946	345 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	YNL035C	P53962	389 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	DAK1	P54838	584 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	VPS16	Q03308	798 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	DIS3	Q08162	1001 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	YBR032W	P38223	100 aa		13.18	□□□□□ -0.3
YPS1	YLR120C	SMF2	P38778	549 aa		13.18	□□□□□ -0.3
YPS1	YLR120C	ERP2	P39704	215 aa		13.18	□□□□□ -0.3
YPS1	YLR120C	ILS1	P09436	1072 aa	Known RBP	13.17	□□□□□ -0.3
YPS1	YLR120C	PRP4	P20053	465 aa	Known RBP	13.17	□□□□□ -0.3
YPS1	YLR120C	URA7	P28274	579 aa	Known RBP	13.17	□□□□□ -0.3
YPS1	YLR120C	ABZ1	P37254	787 aa	Predicted RBP	13.17	□□□□□ -0.3
YPS1	YLR120C	SUB1	P54000	292 aa	Known RBP	13.17	□□□□□ -0.3
YPS1	YLR120C	SHE9	Q04172	456 aa		13.17	□□□□□ -0.3
YPS1	YLR120C	ICL2	Q12031	575 aa		13.17	□□□□□ -0.3
YPS1	YLR120C	PDB1	P32473	366 aa	Known RBP	13.16	□□□□□ -0.3
YPS1	YLR120C	SET3	P36124	751 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	APN2	P38207	520 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	SCC4	P40090	624 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	PRY3	P47033	881 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	13.16	□□□□□ -0.3	not detected
YPS1	YLR120C	MUK1	Q02866	612 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	RKM2	Q03942	479 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	FMP25	Q08023	583 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	AVL9	Q12500	764 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	BAS1	P22035	811 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	YCR015C	P25616	317 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	CKB2	P38930	258 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	AVT2	P39981	480 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	PSF2	P40359	213 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	STB4	P50104	949 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	BRE5	P53741	515 aa	Known RBP	13.16	□□□□□ -0.3
YPS1	YLR120C	MUB1	Q03162	620 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	CIR2	Q08822	631 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	RTP1	Q12751	981 aa		13.16	□□□□□ -0.3
YPS1	YLR120C	LRE1	P25579	583 aa	Known RBP	13.15	□□□□□ -0.3
YPS1	YLR120C	LYS9	P38999	446 aa		13.15	□□□□□ -0.3
YPS1	YLR120C	DSE1	P40077	573 aa		13.15	□□□□□ -0.3
YPS1	YLR120C	EMW1	P42842	904 aa	Known RBP	13.15	□□□□□ -0.3
YPS1	YLR120C	ADE13	Q05911	482 aa	Known RBP	13.15	□□□□□ -0.3
YPS1	YLR120C	THI21	Q08975	551 aa		13.15	□□□□□ -0.3
YPS1	YLR120C	FRE1	P32791	686 aa		13.14	□□□□□ -0.31
YPS1	YLR120C	LIN1	P38852	340 aa	Predicted RBP	13.14	□□□□□ -0.31
YPS1	YLR120C	REV7	P38927	245 aa		13.14	□□□□□ -0.31
YPS1	YLR120C	TFG1	P41895	735 aa	Predicted RBP	13.14	□□□□□ -0.31
YPS1	YLR120C	RTA1	P53047	317 aa		13.14	□□□□□ -0.31
YPS1	YLR120C	YGR283C	P53336	341 aa	Predicted RBP	13.14	□□□□□ -0.31
YPS1	YLR120C	UBX4	P54730	416 aa		13.14	□□□□□ -0.31
YPS1	YLR120C	RIB2	Q12362	591 aa	Known RBP	13.14	□□□□□ -0.31
YPS1	YLR120C	SSC1	P0CS90	654 aa	Known RBP	13.13	□□□□□ -0.31
YPS1	YLR120C	IMA3	P0CW40	589 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	IMA4	P0CW41	589 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	YPK1	P12688	680 aa	Known RBP	13.13	□□□□□ -0.31
YPS1	YLR120C	DIA4	P38705	446 aa	Predicted RBP	13.13	□□□□□ -0.31
YPS1	YLR120C	YNL134C	P53912	376 aa	Known RBP	13.13	□□□□□ -0.31
YPS1	YLR120C	SPC24	Q04477	213 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	IMA2	Q08295	589 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	YLL056C	Q12177	298 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	HXT3	P32466	567 aa	Known RBP	13.13	□□□□□ -0.31
YPS1	YLR120C	PFD1	P46988	109 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	LIA1	P47120	325 aa	Known RBP	13.13	□□□□□ -0.31
YPS1	YLR120C	NMA111	P53920	997 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	GTR1	Q00582	310 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	BET4	Q00618	327 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	TIF35	Q04067	274 aa	Known RBP	13.13	□□□□□ -0.31
YPS1	YLR120C	TPO1	Q07824	586 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	THI20	Q08224	551 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	YLR053C	Q12026	108 aa		13.13	□□□□□ -0.31
YPS1	YLR120C	CDC20	P26309	610 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	DUR3	P33413	735 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	ETR1	P38071	380 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	HSL7	P38274	827 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	HSM3	P38348	480 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	YAP1801	P38856	637 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	OAF1	P39720	1047 aa	Predicted RBP	13.12	□□□□□ -0.31
YPS1	YLR120C	TMA22	P47089	198 aa	Predicted RBP	13.12	□□□□□ -0.31
YPS1	YLR120C	YJR107W	P47145	328 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	TAF6	P53040	516 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	PCL10	P53124	433 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	DNL4	Q08387	944 aa	Predicted RBP	13.12	□□□□□ -0.31
YPS1	YLR120C	SUT2	Q12286	268 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	IZH4	Q99393	312 aa		13.12	□□□□□ -0.31
YPS1	YLR120C	TEF1	P02994	458 aa	Known RBP	13.11	□□□□□ -0.31
YPS1	YLR120C	YMR085W	P0CF18	432 aa		13.11	□□□□□ -0.31
YPS1	YLR120C	GAL11	P19659	1081 aa		13.11	□□□□□ -0.31
YPS1	YLR120C	MAG2	Q06436	670 aa	Known RBP	13.11	□□□□□ -0.31
YPS1	YLR120C	YET3	Q07451	203 aa		13.11	□□□□□ -0.31
YPS1	YLR120C	VPS13	Q07878	3144 aa		13.11	□□□□□ -0.31
YPS1	YLR120C	ARD1	P07347	238 aa	Predicted RBP	13.1	□□□□□ -0.31
YPS1	YLR120C	GAC1	P28006	793 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	MVD1	P32377	396 aa	Known RBP	13.1	□□□□□ -0.31
YPS1	YLR120C	MRE11	P32829	692 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	KDX1	P36005	433 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	DRE2	P36152	348 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	UBX7	P38349	436 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	AFG3	P39925	761 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	TAH11	P47112	604 aa		13.1	□□□□□ -0.31
YPS1	YLR120C	LSC1	P53598	329 aa	Known RBP	13.1	□□□□□ -0.31
YPS1	YLR120C	SLG1	P54867	378 aa		13.1	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms