RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NYV1	YLR093C	ECM32	P32644	1121 aa	Known RBP	4.17	□□□□□ -1.74
NYV1	YLR093C	RIM4	P38741	713 aa		4.17	□□□□□ -1.74
NYV1	YLR093C	PIH1	P38768	344 aa		4.17	□□□□□ -1.74
NYV1	YLR093C	FDC1	Q03034	503 aa		4.17	□□□□□ -1.74
NYV1	YLR093C	PPN1	Q04119	674 aa		4.17	□□□□□ -1.74
NYV1	YLR093C	YLR407W	Q06070	228 aa		4.17	□□□□□ -1.74
NYV1	YLR093C	NTG2	Q08214	380 aa		4.17	□□□□□ -1.74
NYV1	YLR093C	RPL7B	Q12213	244 aa	Known RBP	4.17	□□□□□ -1.74
NYV1	YLR093C	TUP1	P16649	713 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	BEM3	P32873	1128 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	BUD8	P41698	603 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	PXA1	P41909	870 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	CEF1	Q03654	590 aa	Predicted RBP	4.16	□□□□□ -1.74
NYV1	YLR093C	TRS23	Q03784	219 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	HLR1	Q04429	423 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	TDA9	Q04545	1251 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	GUD1	Q07729	489 aa		4.16	□□□□□ -1.74
NYV1	YLR093C	CPA2	P03965	1118 aa	Known RBP	4.15	□□□□□ -1.75
NYV1	YLR093C	YIP4	P53093	235 aa		4.15	□□□□□ -1.75
NYV1	YLR093C	YPS7	Q06325	596 aa		4.15	□□□□□ -1.75
NYV1	YLR093C	FRE7	Q12333	620 aa		4.15	□□□□□ -1.75
NYV1	YLR093C	YMR084W	A2P2R3	262 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	HEM1	P09950	548 aa	Predicted RBP	4.14	□□□□□ -1.75
NYV1	YLR093C	SWI6	P09959	803 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	MRPL7	P36519	292 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	APD1	P38281	316 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	TMN3	P40071	706 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	NMD5	P46970	1048 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	IRC8	P47046	822 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	MET13	P53128	600 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	ATP23	P53722	227 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	YNL018C	P53976	612 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	YDL073W	Q07454	984 aa		4.14	□□□□□ -1.75
NYV1	YLR093C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
NYV1	YLR093C	TSR4	P25040	408 aa		4.13	□□□□□ -1.75
NYV1	YLR093C	MGS1	P40151	587 aa		4.13	□□□□□ -1.75
NYV1	YLR093C	BFA1	P47113	574 aa		4.13	□□□□□ -1.75
NYV1	YLR093C	COQ6	P53318	479 aa		4.13	□□□□□ -1.75
NYV1	YLR093C	STP4	Q07351	490 aa		4.13	□□□□□ -1.75
NYV1	YLR093C	CNE1	P27825	502 aa		4.12	□□□□□ -1.75
NYV1	YLR093C	EUG1	P32474	517 aa		4.12	□□□□□ -1.75
NYV1	YLR093C	RPC34	P32910	317 aa		4.12	□□□□□ -1.75
NYV1	YLR093C	PPE1	P38796	400 aa		4.12	□□□□□ -1.75
NYV1	YLR093C	OSW7	P43611	510 aa		4.12	□□□□□ -1.75
NYV1	YLR093C	RET2	P43621	546 aa		4.12	□□□□□ -1.75
NYV1	YLR093C	ERG13	P54839	491 aa	Known RBP	4.12	□□□□□ -1.75
NYV1	YLR093C	EFR3	Q03653	782 aa	Known RBP	4.12	□□□□□ -1.75
NYV1	YLR093C	NSE5	Q03718	556 aa		4.12	□□□□□ -1.75
NYV1	YLR093C	WHI2	P12611	486 aa		4.11	□□□□□ -1.75
NYV1	YLR093C	PRE4	P30657	266 aa		4.11	□□□□□ -1.75
NYV1	YLR093C	MEP2	P41948	499 aa		4.11	□□□□□ -1.75
NYV1	YLR093C	SNO3	P43544	222 aa		4.11	□□□□□ -1.75
NYV1	YLR093C	YGR054W	P53235	642 aa	Known RBP	4.11	□□□□□ -1.75
NYV1	YLR093C	RPS15	Q01855	142 aa	Known RBP	4.11	□□□□□ -1.75
NYV1	YLR093C	MFM1	Q02783	413 aa		4.11	□□□□□ -1.75
NYV1	YLR093C	RPS17A	P02407	136 aa	Known RBP	4.1	□□□□□ -1.75
NYV1	YLR093C	AQY1	P0CD91	305 aa		4.1	□□□□□ -1.75
NYV1	YLR093C	RPS17B	P14127	136 aa	Known RBP	4.1	□□□□□ -1.75
NYV1	YLR093C	RGT1	P32862	1170 aa		4.1	□□□□□ -1.75
NYV1	YLR093C	SPC97	P38863	823 aa		4.1	□□□□□ -1.75
NYV1	YLR093C	CRG1	P38892	291 aa	RIP-Chip data	4.1	□□□□□ -1.75	not detected
NYV1	YLR093C	IES1	P43579	692 aa		4.1	□□□□□ -1.75
NYV1	YLR093C	BUD17	P53727	317 aa		4.1	□□□□□ -1.75
NYV1	YLR093C	YNL193W	P53870	558 aa		4.1	□□□□□ -1.75
NYV1	YLR093C	YPL216W	Q08964	1102 aa		4.1	□□□□□ -1.75
NYV1	YLR093C	HOP1	P20050	605 aa		4.09	□□□□□ -1.75
NYV1	YLR093C	GSY2	P27472	705 aa		4.09	□□□□□ -1.75
NYV1	YLR093C	DHR2	P36009	735 aa	Predicted RBP	4.09	□□□□□ -1.75
NYV1	YLR093C	FTR1	P40088	404 aa		4.09	□□□□□ -1.75
NYV1	YLR093C	BST1	P43571	1029 aa		4.09	□□□□□ -1.75
NYV1	YLR093C	TAF4	P50105	388 aa		4.09	□□□□□ -1.75
NYV1	YLR093C	NOP15	P53927	220 aa	Predicted RBP	4.09	□□□□□ -1.75
NYV1	YLR093C	TFB2	Q02939	513 aa		4.09	□□□□□ -1.75
NYV1	YLR093C	MRPL9	P31334	269 aa		4.08	□□□□□ -1.76
NYV1	YLR093C	LOT5	P34234	306 aa		4.08	□□□□□ -1.76
NYV1	YLR093C	TDA3	P38758	523 aa		4.08	□□□□□ -1.76
NYV1	YLR093C	MNT3	P40549	630 aa		4.08	□□□□□ -1.76
NYV1	YLR093C	RSC9	Q03124	581 aa		4.08	□□□□□ -1.76
NYV1	YLR093C	GFD1	Q04839	188 aa	Known RBP	4.08	□□□□□ -1.76
NYV1	YLR093C	CDS1	P38221	457 aa		4.07	□□□□□ -1.76
NYV1	YLR093C	EXO1	P39875	702 aa		4.07	□□□□□ -1.76
NYV1	YLR093C	PCI8	P40512	444 aa		4.07	□□□□□ -1.76
NYV1	YLR093C	TIM50	Q02776	476 aa		4.07	□□□□□ -1.76
NYV1	YLR093C	BSP1	Q06604	576 aa		4.07	□□□□□ -1.76
NYV1	YLR093C	TGS1	Q12052	315 aa		4.07	□□□□□ -1.76
NYV1	YLR093C	PRS5	Q12265	496 aa	Known RBP	4.07	□□□□□ -1.76
NYV1	YLR093C	CAP1	P28495	268 aa	Known RBP	4.06	□□□□□ -1.76
NYV1	YLR093C	ASK1	P35734	292 aa		4.06	□□□□□ -1.76
NYV1	YLR093C	CKB2	P38930	258 aa		4.06	□□□□□ -1.76
NYV1	YLR093C	PRM2	P40534	656 aa		4.06	□□□□□ -1.76
NYV1	YLR093C	OPT1	P40897	799 aa		4.06	□□□□□ -1.76
NYV1	YLR093C	YFL015C	P43578	164 aa		4.06	□□□□□ -1.76
NYV1	YLR093C	YJL043W	P47053	257 aa		4.06	□□□□□ -1.76
NYV1	YLR093C	IDP3	P53982	420 aa	Known RBP	4.06	□□□□□ -1.76
NYV1	YLR093C	BRN1	P38170	754 aa		4.05	□□□□□ -1.76
NYV1	YLR093C	DUN1	P39009	513 aa		4.05	□□□□□ -1.76
NYV1	YLR093C	YEL025C	P39991	1188 aa		4.05	□□□□□ -1.76
NYV1	YLR093C	TDA10	P42938	290 aa		4.05	□□□□□ -1.76
NYV1	YLR093C	SAP4	P53036	818 aa		4.05	□□□□□ -1.76
NYV1	YLR093C	SCW4	P53334	386 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms