RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C THI6P41835 540 aa3.16□□□□□ -1.9
RPL40BYKR094C ATG36P46983 293 aa3.16□□□□□ -1.9
RPL40BYKR094C GPD1Q00055 391 aaKnown RBP3.16□□□□□ -1.9
RPL40BYKR094C RPC34P32910 317 aa3.15□□□□□ -1.91
RPL40BYKR094C SPC97P38863 823 aa3.15□□□□□ -1.91
RPL40BYKR094C TMN3P40071 706 aa3.15□□□□□ -1.91
RPL40BYKR094C BST1P43571 1029 aa3.15□□□□□ -1.91
RPL40BYKR094C YNL018CP53976 612 aa3.15□□□□□ -1.91
RPL40BYKR094C URE2P23202 354 aaKnown RBP3.14□□□□□ -1.91
RPL40BYKR094C GCS1P35197 352 aa3.14□□□□□ -1.91
RPL40BYKR094C BEM4P39011 633 aa3.14□□□□□ -1.91
RPL40BYKR094C LSC1P53598 329 aaKnown RBP3.14□□□□□ -1.91
RPL40BYKR094C MFM1Q02783 413 aa3.14□□□□□ -1.91
RPL40BYKR094C YAP1P19880 650 aaKnown RBP3.13□□□□□ -1.91
RPL40BYKR094C IME1P21190 360 aa3.13□□□□□ -1.91
RPL40BYKR094C PCL2P25693 308 aa3.13□□□□□ -1.91
RPL40BYKR094C YKU70P32807 602 aa3.13□□□□□ -1.91
RPL40BYKR094C MRPL7P36519 292 aa3.13□□□□□ -1.91
RPL40BYKR094C APD1P38281 316 aa3.13□□□□□ -1.91
RPL40BYKR094C PCM1P38628 557 aaKnown RBP3.13□□□□□ -1.91
RPL40BYKR094C PPE1P38796 400 aa3.13□□□□□ -1.91
RPL40BYKR094C COQ6P53318 479 aa3.13□□□□□ -1.91
RPL40BYKR094C CRC1Q12289 327 aa3.13□□□□□ -1.91
RPL40BYKR094C CCT4P39078 528 aaKnown RBP3.12□□□□□ -1.91
RPL40BYKR094C EXO1P39875 702 aa3.12□□□□□ -1.91
RPL40BYKR094C BUD8P41698 603 aa3.12□□□□□ -1.91
RPL40BYKR094C BUD17P53727 317 aa3.12□□□□□ -1.91
RPL40BYKR094C IDP3P53982 420 aaKnown RBP3.12□□□□□ -1.91
RPL40BYKR094C TIM50Q02776 476 aa3.12□□□□□ -1.91
RPL40BYKR094C YLR407WQ06070 228 aa3.12□□□□□ -1.91
RPL40BYKR094C YPS7Q06325 596 aa3.12□□□□□ -1.91
RPL40BYKR094C GIN4Q12263 1142 aa3.12□□□□□ -1.91
RPL40BYKR094C HER1Q12276 1246 aa3.12□□□□□ -1.91
RPL40BYKR094C YOR131CQ12486 218 aa3.12□□□□□ -1.91
RPL40BYKR094C YLR111WQ12528 110 aa3.12□□□□□ -1.91
RPL40BYKR094C PRP22P24384 1145 aaKnown RBP3.11□□□□□ -1.91
RPL40BYKR094C CNE1P27825 502 aa3.11□□□□□ -1.91
RPL40BYKR094C YKR075CP36155 307 aa3.11□□□□□ -1.91
RPL40BYKR094C OPT1P40897 799 aa3.11□□□□□ -1.91
RPL40BYKR094C YFL015CP43578 164 aa3.11□□□□□ -1.91
RPL40BYKR094C YMR210WQ03649 449 aa3.11□□□□□ -1.91
RPL40BYKR094C EFR3Q03653 782 aaKnown RBP3.11□□□□□ -1.91
RPL40BYKR094C NUP53Q03790 475 aa3.11□□□□□ -1.91
RPL40BYKR094C COG8Q04632 607 aa3.11□□□□□ -1.91
RPL40BYKR094C BSP1Q06604 576 aa3.11□□□□□ -1.91
RPL40BYKR094C YDL073WQ07454 984 aa3.11□□□□□ -1.91
RPL40BYKR094C YMR084WA2P2R3 262 aa3.1□□□□□ -1.91
RPL40BYKR094C YMR085WP0CF18 432 aa3.1□□□□□ -1.91
RPL40BYKR094C WHI2P12611 486 aa3.1□□□□□ -1.91
RPL40BYKR094C GSY2P27472 705 aa3.1□□□□□ -1.91
RPL40BYKR094C YGR054WP53235 642 aaKnown RBP3.1□□□□□ -1.91
RPL40BYKR094C SPO1P53541 631 aa3.1□□□□□ -1.91
RPL40BYKR094C YPL216WQ08964 1102 aa3.1□□□□□ -1.91
RPL40BYKR094C YPR089WO13585 888 aa3.09□□□□□ -1.91
RPL40BYKR094C NOP1P15646 327 aaKnown RBP3.09□□□□□ -1.91
RPL40BYKR094C SFL1P20134 766 aa3.09□□□□□ -1.91
RPL40BYKR094C PXA1P41909 870 aa3.09□□□□□ -1.91
RPL40BYKR094C RPS15Q01855 142 aaKnown RBP3.09□□□□□ -1.91
RPL40BYKR094C FDC1Q03034 503 aa3.09□□□□□ -1.91
RPL40BYKR094C RDL1Q12305 139 aaKnown RBP3.09□□□□□ -1.91
RPL40BYKR094C RNR3P21672 869 aaKnown RBP3.08□□□□□ -1.92
RPL40BYKR094C PEX6P33760 1030 aa3.08□□□□□ -1.92
RPL40BYKR094C PBP2P38151 413 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
RPL40BYKR094C MAL31P38156 614 aa3.08□□□□□ -1.92
RPL40BYKR094C CRG1P38892 291 aaRIP-Chip data3.08□□□□□ -1.92not detected
RPL40BYKR094C YIL024CP40543 189 aa3.08□□□□□ -1.92
RPL40BYKR094C YER190C-BP0CX94 160 aa3.07□□□□□ -1.92
RPL40BYKR094C YEL077W-AP0CX95 160 aa3.07□□□□□ -1.92
RPL40BYKR094C YGR296C-BP0CX96 160 aa3.07□□□□□ -1.92
RPL40BYKR094C YPL283W-BP0CX97 160 aa3.07□□□□□ -1.92
RPL40BYKR094C YPR204C-AP0CX98 160 aa3.07□□□□□ -1.92
RPL40BYKR094C MSH2P25847 964 aa3.07□□□□□ -1.92
RPL40BYKR094C FTR1P40088 404 aa3.07□□□□□ -1.92
RPL40BYKR094C CEF1Q03654 590 aaPredicted RBP3.07□□□□□ -1.92
RPL40BYKR094C PRE4P30657 266 aa3.06□□□□□ -1.92
RPL40BYKR094C YMR124WP39523 943 aaKnown RBP3.06□□□□□ -1.92
RPL40BYKR094C OAF1P39720 1047 aaPredicted RBP3.06□□□□□ -1.92
RPL40BYKR094C YAT2P40017 923 aa3.06□□□□□ -1.92
RPL40BYKR094C NUP82P40368 713 aa3.06□□□□□ -1.92
RPL40BYKR094C UGO1Q03327 502 aa3.06□□□□□ -1.92
RPL40BYKR094C STP4Q07351 490 aa3.06□□□□□ -1.92
RPL40BYKR094C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
RPL40BYKR094C MGM1P32266 881 aa3.05□□□□□ -1.92
RPL40BYKR094C SRP40P32583 406 aaPredicted RBP3.05□□□□□ -1.92
RPL40BYKR094C CDS1P38221 457 aa3.05□□□□□ -1.92
RPL40BYKR094C FLO5P38894 1075 aa3.05□□□□□ -1.92
RPL40BYKR094C TDA10P42938 290 aa3.05□□□□□ -1.92
RPL40BYKR094C SAP4P53036 818 aa3.05□□□□□ -1.92
RPL40BYKR094C RPN4Q03465 531 aa3.05□□□□□ -1.92
RPL40BYKR094C GFD1Q04839 188 aaKnown RBP3.05□□□□□ -1.92
RPL40BYKR094C ENT2Q05785 613 aa3.05□□□□□ -1.92
RPL40BYKR094C TPO3Q06451 622 aa3.05□□□□□ -1.92
RPL40BYKR094C PCL8Q08966 492 aa3.05□□□□□ -1.92
RPL40BYKR094C YLR125WQ12138 136 aa3.05□□□□□ -1.92
RPL40BYKR094C PHO8P11491 566 aa3.04□□□□□ -1.92
RPL40BYKR094C HOP1P20050 605 aa3.04□□□□□ -1.92
RPL40BYKR094C LOT5P34234 306 aa3.04□□□□□ -1.92
RPL40BYKR094C SAE2P46946 345 aa3.04□□□□□ -1.92
RPL40BYKR094C WAR1Q03631 944 aa3.04□□□□□ -1.92
RPL40BYKR094C PPN1Q04119 674 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms