RNA–Protein interactions for RNA: YKL061W

BLI1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene BLI1, Length 342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLI1	YKL061W	YIP4	P53093	235 aa		2.37	□□□□□ -2.03
BLI1	YKL061W	YNL018C	P53976	612 aa		2.37	□□□□□ -2.03
BLI1	YKL061W	FLC1	Q08967	793 aa		2.37	□□□□□ -2.03
BLI1	YKL061W	CAN1	P04817	590 aa		2.36	□□□□□ -2.03
BLI1	YKL061W	BIT61	P47041	543 aa		2.36	□□□□□ -2.03
BLI1	YKL061W	MRPL1	Q04599	285 aa		2.36	□□□□□ -2.03
BLI1	YKL061W	RPS9B	P05755	195 aa	Known RBP	2.35	□□□□□ -2.03
BLI1	YKL061W	SEC15	P22224	910 aa		2.35	□□□□□ -2.03
BLI1	YKL061W	GSY2	P27472	705 aa		2.35	□□□□□ -2.03
BLI1	YKL061W	MRPL7	P36519	292 aa		2.35	□□□□□ -2.03
BLI1	YKL061W	HSL7	P38274	827 aa		2.35	□□□□□ -2.03
BLI1	YKL061W	YFL015C	P43578	164 aa		2.35	□□□□□ -2.03
BLI1	YKL061W	COQ6	P53318	479 aa		2.35	□□□□□ -2.03
BLI1	YKL061W	SNP1	Q00916	300 aa	Predicted RBP	2.35	□□□□□ -2.03
BLI1	YKL061W	RDL1	Q12305	139 aa	Known RBP	2.35	□□□□□ -2.03
BLI1	YKL061W	YEL076C-A	P0CX16	216 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	YLR464W	P0CX17	216 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	STO1	P34160	861 aa	Known RBP	2.34	□□□□□ -2.03
BLI1	YKL061W	MNN4	P36044	1178 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	YEL076C	P39971	216 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	THI6	P41835	540 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	YGL260W	P53056	76 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	RPL15B	P54780	204 aa	Predicted RBP	2.34	□□□□□ -2.03
BLI1	YKL061W	ENT2	Q05785	613 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	NRT1	Q08485	598 aa		2.34	□□□□□ -2.03
BLI1	YKL061W	KIN82	P25341	720 aa		2.33	□□□□□ -2.04
BLI1	YKL061W	TMN3	P40071	706 aa		2.33	□□□□□ -2.04
BLI1	YKL061W	COP1	P53622	1201 aa	Known RBP	2.33	□□□□□ -2.04
BLI1	YKL061W	MFM1	Q02783	413 aa		2.33	□□□□□ -2.04
BLI1	YKL061W	NHX1	Q04121	633 aa		2.33	□□□□□ -2.04
BLI1	YKL061W	YMR084W	A2P2R3	262 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	CDC9	P04819	755 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	CNE1	P27825	502 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	SSZ1	P38788	538 aa	Known RBP	2.32	□□□□□ -2.04
BLI1	YKL061W	YHR202W	P38887	602 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	CAF16	P43569	289 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	AAT1	Q01802	451 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	TPO3	Q06451	622 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.32	□□□□□ -2.04	not detected
BLI1	YKL061W	AIM44	Q99299	758 aa		2.32	□□□□□ -2.04
BLI1	YKL061W	WHI2	P12611	486 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	FRS1	P15624	595 aa	Known RBP	2.31	□□□□□ -2.04
BLI1	YKL061W	YCR043C	P25361	127 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	GND1	P38720	489 aa	Known RBP	2.31	□□□□□ -2.04
BLI1	YKL061W	PPE1	P38796	400 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	GDH3	P39708	457 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	CFD1	P40558	293 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	MAL11	P53048	616 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	RCR2	Q03446	210 aa	Known RBP	2.31	□□□□□ -2.04
BLI1	YKL061W	YDL073W	Q07454	984 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	VHS3	Q08438	674 aa		2.31	□□□□□ -2.04
BLI1	YKL061W	NUG1	P40010	520 aa	Known RBP	2.3	□□□□□ -2.04
BLI1	YKL061W	SAE2	P46946	345 aa		2.3	□□□□□ -2.04
BLI1	YKL061W	BUD17	P53727	317 aa		2.3	□□□□□ -2.04
BLI1	YKL061W	EFR3	Q03653	782 aa	Known RBP	2.3	□□□□□ -2.04
BLI1	YKL061W	SPN1	Q06505	410 aa	Predicted RBP	2.3	□□□□□ -2.04
BLI1	YKL061W	RNR3	P21672	869 aa	Known RBP	2.29	□□□□□ -2.04
BLI1	YKL061W	AIM17	P23180	465 aa	Known RBP	2.29	□□□□□ -2.04
BLI1	YKL061W	SLX1	P38324	304 aa		2.29	□□□□□ -2.04
BLI1	YKL061W	ARC40	P38328	384 aa	Known RBP	2.29	□□□□□ -2.04
BLI1	YKL061W	YIL152W	P40455	235 aa		2.29	□□□□□ -2.04
BLI1	YKL061W	YIR016W	P40572	265 aa		2.29	□□□□□ -2.04
BLI1	YKL061W	MDV1	P47025	714 aa		2.29	□□□□□ -2.04
BLI1	YKL061W	CIT2	P08679	460 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	IMG2	P25642	146 aa	Predicted RBP	2.28	□□□□□ -2.04
BLI1	YKL061W	HOG1	P32485	435 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	PET127	P32606	800 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	YJR039W	P47107	1121 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	HUL5	P53119	910 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	TIM50	Q02776	476 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	YPL071C	Q02864	156 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	VBA4	Q04602	768 aa	Known RBP	2.28	□□□□□ -2.04
BLI1	YKL061W	YPL216W	Q08964	1102 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	DCS2	Q12123	353 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	YMR230W-A	Q3E7B5	62 aa		2.28	□□□□□ -2.04
BLI1	YKL061W	SRP40	P32583	406 aa	Predicted RBP	2.27	□□□□□ -2.05
BLI1	YKL061W	YBR139W	P38109	508 aa		2.27	□□□□□ -2.05
BLI1	YKL061W	TES1	P41903	349 aa	Known RBP	2.27	□□□□□ -2.05
BLI1	YKL061W	TDA10	P42938	290 aa		2.27	□□□□□ -2.05
BLI1	YKL061W	RPS15	Q01855	142 aa	Known RBP	2.27	□□□□□ -2.05
BLI1	YKL061W	RTT103	Q05543	409 aa		2.27	□□□□□ -2.05
BLI1	YKL061W	GRS2	Q06817	618 aa		2.27	□□□□□ -2.05
BLI1	YKL061W	PCL8	Q08966	492 aa		2.27	□□□□□ -2.05
BLI1	YKL061W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
BLI1	YKL061W	GAL11	P19659	1081 aa		2.26	□□□□□ -2.05
BLI1	YKL061W	FMP46	P36141	133 aa	Known RBP	2.26	□□□□□ -2.05
BLI1	YKL061W	MTG2	P38860	518 aa		2.26	□□□□□ -2.05
BLI1	YKL061W	IRC7	P43623	340 aa		2.26	□□□□□ -2.05
BLI1	YKL061W	IME1	P21190	360 aa		2.25	□□□□□ -2.05
BLI1	YKL061W	SAP4	P53036	818 aa		2.25	□□□□□ -2.05
BLI1	YKL061W	YGR054W	P53235	642 aa	Known RBP	2.25	□□□□□ -2.05
BLI1	YKL061W	BOP3	P53958	396 aa		2.25	□□□□□ -2.05
BLI1	YKL061W	WAR1	Q03631	944 aa		2.25	□□□□□ -2.05
BLI1	YKL061W	YMR317W	Q04893	1140 aa		2.25	□□□□□ -2.05
BLI1	YKL061W	COQ3	P27680	312 aa		2.24	□□□□□ -2.05
BLI1	YKL061W	RPT3	P33298	428 aa	Known RBP	2.24	□□□□□ -2.05
BLI1	YKL061W	YPT10	P38146	199 aa		2.24	□□□□□ -2.05
BLI1	YKL061W	BUD8	P41698	603 aa		2.24	□□□□□ -2.05
BLI1	YKL061W	HOS2	P53096	452 aa	Predicted RBP	2.24	□□□□□ -2.05
BLI1	YKL061W	AIM14	P53109	570 aa		2.24	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms