RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	MUD2	P36084	527 aa	Known RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	SPC42	P36094	363 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	SHM2	P37291	469 aa	Known RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	SMF1	P38925	575 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	VPS45	P38932	577 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	TAT2	P38967	592 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	SMC2	P38989	1170 aa	Known RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	HUL4	P40985	892 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	ASE1	P50275	885 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	CBK1	P53894	756 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	NGL3	Q03210	505 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	RSM24	Q03976	319 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	SIZ1	Q04195	904 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	GYL1	Q04322	720 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	ADY4	Q05955	493 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	SKG3	Q06315	1026 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	TDA5	Q06417	326 aa	Known RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	OMS1	Q06668	471 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	YPL216W	Q08964	1102 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	TMA46	Q12000	345 aa	Known RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	NUR1	Q12066	484 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	FAL1	Q12099	399 aa	Known RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	RUD3	Q12234	484 aa	Known RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	YOR131C	Q12486	218 aa		4.13	□□□□□ -1.75
RPB3	YIL021W	RPL11B	Q3E757	174 aa	Predicted RBP	4.13	□□□□□ -1.75
RPB3	YIL021W	CIT2	P08679	460 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	SSB1	P11484	613 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	RPL8A	P17076	256 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	ISY1	P21374	235 aa	Predicted RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	GSY1	P23337	708 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	CDC60	P26637	1090 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	RPS7A	P26786	190 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	APL1	P27351	700 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	CHS3	P29465	1165 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	HXT1	P32465	570 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	YKU70	P32807	602 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	SLA2	P33338	968 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	YKL069W	P36088	180 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	MED8	P38304	223 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	PNT1	P38969	423 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	SPF1	P39986	1215 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	SSB2	P40150	613 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	TOS3	P43637	560 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	CTK3	P46963	296 aa	Predicted RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	LSB1	P53281	241 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	RPN4	Q03465	531 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	SOV1	Q04748	898 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	YSH1	Q06224	779 aa	Predicted RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	YLH47	Q06493	454 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	NOP6	Q07623	225 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	YLR001C	Q07895	862 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	RLP24	Q07915	199 aa	Known RBP	4.12	□□□□□ -1.75
RPB3	YIL021W	PCL8	Q08966	492 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	DAS2	Q12084	232 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	GNT1	Q12096	491 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	RMP1	Q12530	201 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	SMC6	Q12749	1114 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	TUS1	Q06412	1307 aa		4.12	□□□□□ -1.75
RPB3	YIL021W	CDC8	P00572	216 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	BI4	P03879	638 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	YEL076C-A	P0CX16	216 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	YLR464W	P0CX17	216 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	PWP2	P25635	923 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	PAP1	P29468	568 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	LYP1	P32487	611 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	ECM32	P32644	1121 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	XRS2	P33301	854 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	NIP100	P33420	868 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	MCM7	P38132	845 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	PPS1	P38148	807 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RPB3	YIL021W	GDT1	P38301	280 aa	Predicted RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	GAA1	P39012	614 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	YMR124W	P39523	943 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	ECM1	P39715	212 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	SAP1	P39955	897 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	YEL076C	P39971	216 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	MIC19	P43594	170 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	TIM54	P47045	478 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	SGM1	P47166	707 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	CCM1	P48237	864 aa	Predicted RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	HUL5	P53119	910 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	DOS2	P54858	310 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	VTC3	Q02725	835 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	MFM1	Q02783	413 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	NAN1	Q02931	896 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	BUL2	Q03758	920 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	POB3	Q04636	552 aa	Known RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	YPR078C	Q06813	372 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	YOR352W	Q08816	343 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	RRG1	Q12167	365 aa	Predicted RBP	4.11	□□□□□ -1.75
RPB3	YIL021W	YPL066W	Q12194	479 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	GSC2	P40989	1895 aa		4.11	□□□□□ -1.75
RPB3	YIL021W	TRP2	P00899	507 aa	Known RBP	4.1	□□□□□ -1.75
RPB3	YIL021W	RAD1	P06777	1100 aa		4.1	□□□□□ -1.75
RPB3	YIL021W	TUP1	P16649	713 aa		4.1	□□□□□ -1.75
RPB3	YIL021W	RAD53	P22216	821 aa		4.1	□□□□□ -1.75
RPB3	YIL021W	SWE1	P32944	819 aa		4.1	□□□□□ -1.75
RPB3	YIL021W	JNM1	P36224	373 aa		4.1	□□□□□ -1.75
RPB3	YIL021W	ERT1	P38140	529 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms