RNA–Protein interactions for RNA: YIL003W

CFD1, Transcript of Highly conserved iron-sulfur cluster binding protein, yeast

Gene CFD1, Length 882 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CFD1	YIL003W	EDE1	P34216	1381 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	NUP192	P47054	1683 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	MSM1	P22438	575 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	PHO3	P24031	467 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	PET309	P32522	965 aa	Predicted RBP	4.17	□□□□□ -1.74
CFD1	YIL003W	STE14	P32584	239 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	TRM2	P33753	639 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	ATG19	P35193	415 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	APN2	P38207	520 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	SAW1	P39735	261 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	PZF1	P39933	429 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	PFA3	P42836	336 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	IES1	P43579	692 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	MTD1	Q02046	320 aa	Known RBP	4.17	□□□□□ -1.74
CFD1	YIL003W	ADY3	Q07732	790 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	UPC2	Q12151	913 aa		4.17	□□□□□ -1.74
CFD1	YIL003W	YEL076C-A	P0CX16	216 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	YLR464W	P0CX17	216 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	PRP4	P20053	465 aa	Known RBP	4.16	□□□□□ -1.74
CFD1	YIL003W	SED4	P25365	1065 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	MSH1	P25846	959 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	DGR2	P32330	852 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	YPT53	P36019	220 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	SRP68	P38687	599 aa	Known RBP	4.16	□□□□□ -1.74
CFD1	YIL003W	DUN1	P39009	513 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	STL1	P39932	569 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	YEL076C	P39971	216 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	URM1	P40554	99 aa	Predicted RBP	4.16	□□□□□ -1.74
CFD1	YIL003W	PUS4	P48567	403 aa	Known RBP	4.16	□□□□□ -1.74
CFD1	YIL003W	UBA2	P52488	636 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	GTF1	P53260	183 aa	Predicted RBP	4.16	□□□□□ -1.74
CFD1	YIL003W	PLB2	Q03674	706 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	DUS4	Q06063	367 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	STP4	Q07351	490 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	SSP2	Q08646	371 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	ARP7	Q12406	477 aa		4.16	□□□□□ -1.74
CFD1	YIL003W	RAV1	P47104	1357 aa		4.15	□□□□□ -1.74
CFD1	YIL003W	MF(ALPHA)2	P32435	120 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	RPN12	P32496	274 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	BEM3	P32873	1128 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	MSS4	P38994	779 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	SCS2	P40075	244 aa	Known RBP	4.15	□□□□□ -1.75
CFD1	YIL003W	GID8	P40208	455 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	VHR1	P40522	640 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	GCV2	P49095	1034 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	EXG2	P52911	562 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	ASI2	P53895	289 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	GTR1	Q00582	310 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	TRS130	Q03660	1102 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	ISA1	Q07821	250 aa	Predicted RBP	4.15	□□□□□ -1.75
CFD1	YIL003W	PSF3	Q12146	194 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	YRF1-2	P40105	1681 aa		4.15	□□□□□ -1.75
CFD1	YIL003W	KRE5	P22023	1365 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	TUB3	P09734	445 aa	Known RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	ADH4	P10127	382 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	PYC1	P11154	1178 aa	Known RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
CFD1	YIL003W	ADE2	P21264	571 aa	Known RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	STE11	P23561	717 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	SEC21	P32074	935 aa	Known RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	TGL1	P34163	548 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	SDS22	P36047	338 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	APM3	P38153	483 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	SPC72	P39723	622 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	VPS27	P40343	622 aa	Known RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	MET12	P46151	657 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	IML2	P47031	731 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	MAD3	P47074	515 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	MSE1	P48525	536 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	PRP31	P49704	494 aa	Predicted RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	RIA1	P53893	1110 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	RCR2	Q03446	210 aa	Known RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	ROT1	Q03691	256 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	BLS1	Q06071	122 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	VHS3	Q08438	674 aa		4.14	□□□□□ -1.75
CFD1	YIL003W	RTK1	Q12100	620 aa	Predicted RBP	4.14	□□□□□ -1.75
CFD1	YIL003W	YLR415C	O13578	112 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	GFA1	P14742	717 aa	Known RBP	4.13	□□□□□ -1.75
CFD1	YIL003W	IME1	P21190	360 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	MCM10	P32354	571 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	IMA5	P40884	581 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	ENP2	P48234	707 aa	Known RBP	4.13	□□□□□ -1.75
CFD1	YIL003W	YBP2	P53169	641 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	SLI1	P53304	468 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	ARG5,6	Q01217	863 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	MCH5	Q08777	521 aa		4.13	□□□□□ -1.75
CFD1	YIL003W	HIS5	P07172	385 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	FRS1	P15624	595 aa	Known RBP	4.12	□□□□□ -1.75
CFD1	YIL003W	HCM1	P25364	564 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	GFD2	P25370	566 aa	Known RBP	4.12	□□□□□ -1.75
CFD1	YIL003W	PET127	P32606	800 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	SIC1	P38634	284 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	SWD1	P39706	426 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	YNL195C	P40168	261 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	MAD2	P40958	196 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	NCS6	P53088	359 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	ENT2	Q05785	613 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	VPS36	Q06696	566 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	RXT3	Q07458	294 aa		4.12	□□□□□ -1.75
CFD1	YIL003W	NEW1	Q08972	1196 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms