RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W IMP4P53941 290 aaKnown RBP10.67□□□□□ -0.7
UBA4YHR111W PIR3Q03180 325 aa10.67□□□□□ -0.7
UBA4YHR111W AIM32Q04689 311 aa10.67□□□□□ -0.7
UBA4YHR111W PMT7Q06644 662 aa10.67□□□□□ -0.7
UBA4YHR111W OPY2Q06810 360 aa10.67□□□□□ -0.7
UBA4YHR111W THI20Q08224 551 aa10.67□□□□□ -0.7
UBA4YHR111W YOR387CQ08910 206 aa10.67□□□□□ -0.7
UBA4YHR111W MPD2Q99316 277 aa10.67□□□□□ -0.7
UBA4YHR111W ENO2P00925 437 aaKnown RBP10.66□□□□□ -0.7
UBA4YHR111W SEC1P30619 724 aaKnown RBP10.66□□□□□ -0.7
UBA4YHR111W PTC3P34221 468 aaKnown RBP10.66□□□□□ -0.7
UBA4YHR111W GGA2P38817 585 aaKnown RBP10.66□□□□□ -0.7
UBA4YHR111W DOT6P40059 670 aaKnown RBP10.66□□□□□ -0.7
UBA4YHR111W YER189WP40104 122 aa10.66□□□□□ -0.7
UBA4YHR111W ATG3P40344 310 aa10.66□□□□□ -0.7
UBA4YHR111W COQ6P53318 479 aa10.66□□□□□ -0.7
UBA4YHR111W YNR061CP53747 219 aa10.66□□□□□ -0.7
UBA4YHR111W YNL144CP53907 740 aa10.66□□□□□ -0.7
UBA4YHR111W SIL1Q08199 421 aa10.66□□□□□ -0.7
UBA4YHR111W SWE1P32944 819 aa10.65□□□□□ -0.7
UBA4YHR111W ERG5P54781 538 aa10.65□□□□□ -0.7
UBA4YHR111W YRR1Q12172 810 aa10.65□□□□□ -0.7
UBA4YHR111W SVS1Q12254 260 aa10.65□□□□□ -0.7
UBA4YHR111W VPS5Q92331 675 aa10.65□□□□□ -0.7
UBA4YHR111W MEX67Q99257 599 aaKnown RBP10.65□□□□□ -0.7
UBA4YHR111W PAB1P04147 577 aaKnown RBP RIP-Chip data10.64□□□□□ -0.71not detected
UBA4YHR111W REV1P12689 985 aa10.64□□□□□ -0.71
UBA4YHR111W GPI10P30777 616 aa10.64□□□□□ -0.71
UBA4YHR111W YMR124WP39523 943 aaKnown RBP10.64□□□□□ -0.71
UBA4YHR111W PSY2P40164 858 aa10.64□□□□□ -0.71
UBA4YHR111W YPL014WQ02606 381 aa10.64□□□□□ -0.71
UBA4YHR111W SYH1Q02875 849 aaKnown RBP10.64□□□□□ -0.71
UBA4YHR111W SXM1Q04175 944 aaKnown RBP10.64□□□□□ -0.71
UBA4YHR111W GYL1Q04322 720 aa10.64□□□□□ -0.71
UBA4YHR111W ERV41Q04651 352 aa10.64□□□□□ -0.71
UBA4YHR111W ECM38Q05902 660 aaPredicted RBP10.64□□□□□ -0.71
UBA4YHR111W FLC1Q08967 793 aa10.64□□□□□ -0.71
UBA4YHR111W APL4Q12028 832 aa10.64□□□□□ -0.71
UBA4YHR111W CAP1P28495 268 aaKnown RBP10.63□□□□□ -0.71
UBA4YHR111W SGE1P33335 543 aa10.63□□□□□ -0.71
UBA4YHR111W NCL1P38205 684 aaKnown RBP10.63□□□□□ -0.71
UBA4YHR111W TIF5P38431 405 aaKnown RBP10.63□□□□□ -0.71
UBA4YHR111W LYS9P38999 446 aa10.63□□□□□ -0.71
UBA4YHR111W SAP185P40856 1058 aa10.63□□□□□ -0.71
UBA4YHR111W LSB3P43603 459 aaKnown RBP10.63□□□□□ -0.71
UBA4YHR111W RSM26P47141 266 aa10.63□□□□□ -0.71
UBA4YHR111W YGR021WP53212 290 aa10.63□□□□□ -0.71
UBA4YHR111W YGR283CP53336 341 aaPredicted RBP10.63□□□□□ -0.71
UBA4YHR111W ELP3Q02908 557 aaKnown RBP10.63□□□□□ -0.71
UBA4YHR111W UTP5Q04177 643 aaKnown RBP10.63□□□□□ -0.71
UBA4YHR111W YCG1Q06680 1035 aa10.63□□□□□ -0.71
UBA4YHR111W CET1O13297 549 aaPredicted RBP10.62□□□□□ -0.71
UBA4YHR111W KIN3P22209 435 aa10.62□□□□□ -0.71
UBA4YHR111W HCM1P25364 564 aa10.62□□□□□ -0.71
UBA4YHR111W YIH1P25637 258 aa10.62□□□□□ -0.71
UBA4YHR111W ECM32P32644 1121 aaKnown RBP10.62□□□□□ -0.71
UBA4YHR111W ABD1P32783 436 aaPredicted RBP10.62□□□□□ -0.71
UBA4YHR111W KTR4P38131 464 aa10.62□□□□□ -0.71
UBA4YHR111W NMD3P38861 518 aaKnown RBP10.62□□□□□ -0.71
UBA4YHR111W TMN3P40071 706 aa10.62□□□□□ -0.71
UBA4YHR111W TMA108P40462 946 aa10.62□□□□□ -0.71
UBA4YHR111W RMD8P43620 662 aa10.62□□□□□ -0.71
UBA4YHR111W YJR079WP47126 109 aa10.62□□□□□ -0.71
UBA4YHR111W FAA4P47912 694 aaKnown RBP10.62□□□□□ -0.71
UBA4YHR111W COP1P53622 1201 aaKnown RBP10.62□□□□□ -0.71
UBA4YHR111W KTR6P54070 446 aa10.62□□□□□ -0.71
UBA4YHR111W RTN1Q04947 295 aaKnown RBP10.62□□□□□ -0.71
UBA4YHR111W YPR084WQ06821 456 aa10.62□□□□□ -0.71
UBA4YHR111W CIR2Q08822 631 aa10.62□□□□□ -0.71
UBA4YHR111W MTF2P10849 440 aa10.61□□□□□ -0.71
UBA4YHR111W STE5P32917 917 aa10.61□□□□□ -0.71
UBA4YHR111W SET5P38890 526 aaKnown RBP10.61□□□□□ -0.71
UBA4YHR111W HEM14P40012 539 aa10.61□□□□□ -0.71
UBA4YHR111W YIL054WP40524 105 aa10.61□□□□□ -0.71
UBA4YHR111W ERG10P41338 398 aaKnown RBP10.61□□□□□ -0.71
UBA4YHR111W RTT101P47050 842 aa10.61□□□□□ -0.71
UBA4YHR111W PEX31P53203 462 aa10.61□□□□□ -0.71
UBA4YHR111W YMR018WQ04364 514 aa10.61□□□□□ -0.71
UBA4YHR111W AAD4Q07747 329 aa10.61□□□□□ -0.71
UBA4YHR111W PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.61□□□□□ -0.71not detected
UBA4YHR111W ADE3P07245 946 aaKnown RBP10.6□□□□□ -0.71
UBA4YHR111W RRP43P25359 394 aaPredicted RBP10.6□□□□□ -0.71
UBA4YHR111W SWC5P38326 303 aa10.6□□□□□ -0.71
UBA4YHR111W TRM112P53738 135 aaPredicted RBP10.6□□□□□ -0.71
UBA4YHR111W YPK1P12688 680 aaKnown RBP10.59□□□□□ -0.71
UBA4YHR111W CYC8P14922 966 aa10.59□□□□□ -0.71
UBA4YHR111W TRX1P22217 103 aaKnown RBP10.59□□□□□ -0.71
UBA4YHR111W SEC6P32844 805 aa10.59□□□□□ -0.71
UBA4YHR111W FMO1P38866 432 aa10.59□□□□□ -0.71
UBA4YHR111W UBP7P40453 1071 aa10.59□□□□□ -0.71
UBA4YHR111W ASG1P40467 964 aa10.59□□□□□ -0.71
UBA4YHR111W YNR065CP53751 1116 aa10.59□□□□□ -0.71
UBA4YHR111W JJJ1P53863 590 aa10.59□□□□□ -0.71
UBA4YHR111W RKM2Q03942 479 aa10.59□□□□□ -0.71
UBA4YHR111W VPS38Q05919 439 aa10.59□□□□□ -0.71
UBA4YHR111W HOM2P13663 365 aaKnown RBP10.58□□□□□ -0.71
UBA4YHR111W FPR1P20081 114 aaKnown RBP10.58□□□□□ -0.71
UBA4YHR111W MCM2P29469 868 aa10.58□□□□□ -0.71
UBA4YHR111W MET22P32179 357 aa10.58□□□□□ -0.71
UBA4YHR111W BLI1P35727 113 aa10.58□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms