RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	COX18	P53239	316 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	SUN4	P53616	420 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	ARC35	P53731	342 aa	Known RBP	4.4	□□□□□ -1.71
YPT35	YHR105W	YNR071C	P53757	342 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	REC102	Q02721	264 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	TRS130	Q03660	1102 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	NSE5	Q03718	556 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	PSR2	Q07949	397 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	SGO1	Q08490	590 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	SSP2	Q08646	371 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	MCH5	Q08777	521 aa		4.4	□□□□□ -1.71
YPT35	YHR105W	CHD1	P32657	1468 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	URA3	P03962	267 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	CBP3	P21560	335 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	HRR25	P29295	494 aa	Known RBP	4.39	□□□□□ -1.71
YPT35	YHR105W	PRE4	P30657	266 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	APM3	P38153	483 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	YHR033W	P38690	423 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	PRM2	P40534	656 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	KIN4	Q01919	800 aa		4.39	□□□□□ -1.71
YPT35	YHR105W	EIS1	Q05050	843 aa	Known RBP	4.39	□□□□□ -1.71
YPT35	YHR105W	MMS22	Q06164	1454 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	VAS1	P07806	1104 aa	Known RBP	4.38	□□□□□ -1.71
YPT35	YHR105W	HMG2	P12684	1045 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	TUP1	P16649	713 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	EFT1	P32324	842 aa	Known RBP	4.38	□□□□□ -1.71
YPT35	YHR105W	NGG1	P32494	702 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	YBR138C	P38277	524 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	BNA1	P47096	177 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	ENP2	P48234	707 aa	Known RBP	4.38	□□□□□ -1.71
YPT35	YHR105W	PEF1	P53238	335 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	TMA64	Q04600	565 aa	Known RBP	4.38	□□□□□ -1.71
YPT35	YHR105W	GAD1	Q04792	585 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	AIM39	Q08223	395 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	VPS5	Q92331	675 aa		4.38	□□□□□ -1.71
YPT35	YHR105W	NCP1	P16603	691 aa	Known RBP	4.37	□□□□□ -1.71
YPT35	YHR105W	ARG1	P22768	420 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	ERG4	P25340	473 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	MSH1	P25846	959 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	SDS22	P36047	338 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	CRG1	P38892	291 aa	RIP-Chip data	4.37	□□□□□ -1.71	not detected
YPT35	YHR105W	STT3	P39007	718 aa	Known RBP	4.37	□□□□□ -1.71
YPT35	YHR105W	HOS4	P40480	1083 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	PXA1	P41909	870 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	MUP1	P50276	574 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	TFC6	Q06339	672 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	THI22	Q06490	572 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	YLR040C	Q07988	224 aa		4.37	□□□□□ -1.71
YPT35	YHR105W	ERG20	P08524	352 aa	Known RBP	4.36	□□□□□ -1.71
YPT35	YHR105W	SWI4	P25302	1093 aa	Known RBP	4.36	□□□□□ -1.71
YPT35	YHR105W	SSH4	P32343	579 aa		4.36	□□□□□ -1.71
YPT35	YHR105W	FRD1	P32614	470 aa	Known RBP	4.36	□□□□□ -1.71
YPT35	YHR105W	APT2	P36973	181 aa		4.36	□□□□□ -1.71
YPT35	YHR105W	FMO1	P38866	432 aa		4.36	□□□□□ -1.71
YPT35	YHR105W	SSP120	P39931	234 aa	Known RBP	4.36	□□□□□ -1.71
YPT35	YHR105W	BAP3	P41815	604 aa		4.36	□□□□□ -1.71
YPT35	YHR105W	UBA2	P52488	636 aa		4.36	□□□□□ -1.71
YPT35	YHR105W	RRT6	P53117	311 aa	Predicted RBP	4.36	□□□□□ -1.71
YPT35	YHR105W	CPR6	P53691	371 aa	Known RBP	4.36	□□□□□ -1.71
YPT35	YHR105W	ACS1	Q01574	713 aa		4.36	□□□□□ -1.71
YPT35	YHR105W	VBA4	Q04602	768 aa	Known RBP	4.36	□□□□□ -1.71
YPT35	YHR105W	POM34	Q12445	299 aa		4.36	□□□□□ -1.71
YPT35	YHR105W	MCM10	P32354	571 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	YBR053C	P38235	358 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	EHT1	P38295	451 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
YPT35	YHR105W	FTR1	P40088	404 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	PUG1	P40100	303 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	ELO3	P40319	345 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	MEP3	P53390	489 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	SPO1	P53541	631 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	TIM50	Q02776	476 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	DLT1	Q04216	342 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	BLS1	Q06071	122 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	YOL087C	Q99247	1116 aa		4.35	□□□□□ -1.71
YPT35	YHR105W	CAF20	P12962	161 aa	Known RBP	4.34	□□□□□ -1.71
YPT35	YHR105W	SIR1	P21691	654 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	PEX1	P24004	1043 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	MCM3	P24279	971 aa	Known RBP	4.34	□□□□□ -1.71
YPT35	YHR105W	YCL049C	P25577	312 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	CWH43	P25618	953 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	SUL1	P38359	859 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	ERP2	P39704	215 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	VPS27	P40343	622 aa	Known RBP	4.34	□□□□□ -1.71
YPT35	YHR105W	YIL077C	P40508	320 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	SLI1	P53304	468 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	CTF4	Q01454	927 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	COG4	Q06096	861 aa		4.34	□□□□□ -1.71
YPT35	YHR105W	TY1B-DR4	Q07793	1604 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	HSL1	P34244	1518 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	PHO5	P00635	467 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	ALG7	P07286	448 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	MET3	P08536	511 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	MTF2	P10849	440 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	FEN2	P25621	512 aa	Known RBP	4.33	□□□□□ -1.72
YPT35	YHR105W	MSS1	P32559	526 aa	Predicted RBP	4.33	□□□□□ -1.72
YPT35	YHR105W	PSY4	P38193	441 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	YLF2	P38746	405 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	TAH11	P47112	604 aa		4.33	□□□□□ -1.72
YPT35	YHR105W	RFX1	P48743	811 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms