RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C BRE1Q07457 700 aaKnown RBP4.07□□□□□ -1.76
MSM1YGR171C ARP7Q12406 477 aa4.07□□□□□ -1.76
MSM1YGR171C MSM1P22438 575 aa4.06□□□□□ -1.76
MSM1YGR171C MVD1P32377 396 aaKnown RBP4.06□□□□□ -1.76
MSM1YGR171C DEF1P35732 738 aaKnown RBP4.06□□□□□ -1.76
MSM1YGR171C YHR033WP38690 423 aa4.06□□□□□ -1.76
MSM1YGR171C IRC24P40580 263 aa4.06□□□□□ -1.76
MSM1YGR171C YJL163CP46996 555 aa4.06□□□□□ -1.76
MSM1YGR171C MTD1Q02046 320 aaKnown RBP4.06□□□□□ -1.76
MSM1YGR171C YML131WQ03102 365 aa4.06□□□□□ -1.76
MSM1YGR171C HLR1Q04429 423 aa4.06□□□□□ -1.76
MSM1YGR171C COG4Q06096 861 aa4.06□□□□□ -1.76
MSM1YGR171C THI22Q06490 572 aa4.06□□□□□ -1.76
MSM1YGR171C PSF3Q12146 194 aa4.06□□□□□ -1.76
MSM1YGR171C TRM13Q12383 476 aa4.06□□□□□ -1.76
MSM1YGR171C RPN12P32496 274 aa4.05□□□□□ -1.76
MSM1YGR171C HIS7P33734 552 aaKnown RBP4.05□□□□□ -1.76
MSM1YGR171C TGL1P34163 548 aa4.05□□□□□ -1.76
MSM1YGR171C BCD1P38772 366 aa4.05□□□□□ -1.76
MSM1YGR171C REV7P38927 245 aa4.05□□□□□ -1.76
MSM1YGR171C SCS2P40075 244 aaKnown RBP4.05□□□□□ -1.76
MSM1YGR171C TAF1P46677 1066 aa4.05□□□□□ -1.76
MSM1YGR171C PUS4P48567 403 aaKnown RBP4.05□□□□□ -1.76
MSM1YGR171C UBC11P52492 156 aa4.05□□□□□ -1.76
MSM1YGR171C MOT3P54785 490 aaKnown RBP4.05□□□□□ -1.76
MSM1YGR171C ESC8Q08119 714 aa4.05□□□□□ -1.76
MSM1YGR171C IRC13Q08630 104 aa4.05□□□□□ -1.76
MSM1YGR171C ALG7P07286 448 aa4.04□□□□□ -1.76
MSM1YGR171C RPA135P22138 1203 aaKnown RBP4.04□□□□□ -1.76
MSM1YGR171C PMI40P29952 429 aaKnown RBP4.04□□□□□ -1.76
MSM1YGR171C PRE4P30657 266 aa4.04□□□□□ -1.76
MSM1YGR171C SUL1P38359 859 aa4.04□□□□□ -1.76
MSM1YGR171C SSP120P39931 234 aaKnown RBP4.04□□□□□ -1.76
MSM1YGR171C ERR3P42222 437 aa4.04□□□□□ -1.76
MSM1YGR171C IML2P47031 731 aa4.04□□□□□ -1.76
MSM1YGR171C ADY4Q05955 493 aa4.04□□□□□ -1.76
MSM1YGR171C BLS1Q06071 122 aa4.04□□□□□ -1.76
MSM1YGR171C YLR040CQ07988 224 aa4.04□□□□□ -1.76
MSM1YGR171C TAF5P38129 798 aa4.04□□□□□ -1.76
MSM1YGR171C AIM21P40563 679 aa4.04□□□□□ -1.76
MSM1YGR171C SPO1P53541 631 aa4.04□□□□□ -1.76
MSM1YGR171C ENT2Q05785 613 aa4.04□□□□□ -1.76
MSM1YGR171C PPR1P07272 904 aaPredicted RBP4.03□□□□□ -1.76
MSM1YGR171C VAS1P07806 1104 aaKnown RBP4.03□□□□□ -1.76
MSM1YGR171C ADH4P10127 382 aa4.03□□□□□ -1.76
MSM1YGR171C BCS1P32839 456 aa4.03□□□□□ -1.76
MSM1YGR171C BEM3P32873 1128 aa4.03□□□□□ -1.76
MSM1YGR171C TRM2P33753 639 aa4.03□□□□□ -1.76
MSM1YGR171C APM3P38153 483 aa4.03□□□□□ -1.76
MSM1YGR171C FMP52P40008 231 aa4.03□□□□□ -1.76
MSM1YGR171C PIG2P40187 538 aa4.03□□□□□ -1.76
MSM1YGR171C PAN2P53010 1115 aaPredicted RBP4.03□□□□□ -1.76
MSM1YGR171C SQS1P53866 767 aaKnown RBP4.03□□□□□ -1.76
MSM1YGR171C GIR2Q03768 265 aaPredicted RBP4.03□□□□□ -1.76
MSM1YGR171C CIA1Q05583 330 aa4.03□□□□□ -1.76
MSM1YGR171C YKL033W-AQ86ZR7 236 aa4.03□□□□□ -1.76
MSM1YGR171C CBP3P21560 335 aa4.02□□□□□ -1.77
MSM1YGR171C FEN2P25621 512 aaKnown RBP4.02□□□□□ -1.77
MSM1YGR171C COS111P38308 924 aa4.02□□□□□ -1.77
MSM1YGR171C PPE1P38796 400 aa4.02□□□□□ -1.77
MSM1YGR171C SFB3P38810 929 aa4.02□□□□□ -1.77
MSM1YGR171C SWD1P39706 426 aa4.02□□□□□ -1.77
MSM1YGR171C YIL077CP40508 320 aa4.02□□□□□ -1.77
MSM1YGR171C PRM2P40534 656 aa4.02□□□□□ -1.77
MSM1YGR171C MAD2P40958 196 aa4.02□□□□□ -1.77
MSM1YGR171C MAD3P47074 515 aa4.02□□□□□ -1.77
MSM1YGR171C TRS130Q03660 1102 aa4.02□□□□□ -1.77
MSM1YGR171C RGC1Q06108 1083 aaKnown RBP4.02□□□□□ -1.77
MSM1YGR171C YFT2Q06676 274 aa4.02□□□□□ -1.77
MSM1YGR171C SSP2Q08646 371 aa4.02□□□□□ -1.77
MSM1YGR171C MCH5Q08777 521 aa4.02□□□□□ -1.77
MSM1YGR171C RTK1Q12100 620 aaPredicted RBP4.02□□□□□ -1.77
MSM1YGR171C CLF1Q12309 687 aaPredicted RBP4.02□□□□□ -1.77
MSM1YGR171C ZRT2Q12436 422 aa4.02□□□□□ -1.77
MSM1YGR171C VPS5Q92331 675 aa4.02□□□□□ -1.77
MSM1YGR171C SSM4P40318 1319 aa4.02□□□□□ -1.77
MSM1YGR171C PRP28P23394 588 aa4.01□□□□□ -1.77
MSM1YGR171C GFD2P25370 566 aaKnown RBP4.01□□□□□ -1.77
MSM1YGR171C MPE1P35728 441 aaKnown RBP4.01□□□□□ -1.77
MSM1YGR171C GIP4P39732 760 aa4.01□□□□□ -1.77
MSM1YGR171C MNT2P53059 558 aa4.01□□□□□ -1.77
MSM1YGR171C PEF1P53238 335 aa4.01□□□□□ -1.77
MSM1YGR171C YOL073CQ08232 322 aa4.01□□□□□ -1.77
MSM1YGR171C DIN7Q12086 430 aa4.01□□□□□ -1.77
MSM1YGR171C MTC7P32633 139 aa4.01□□□□□ -1.77
MSM1YGR171C PHO11P35842 467 aa4.01□□□□□ -1.77
MSM1YGR171C PSY4P38193 441 aa4.01□□□□□ -1.77
MSM1YGR171C PHO12P38693 467 aa4.01□□□□□ -1.77
MSM1YGR171C CRG1P38892 291 aaRIP-Chip data4.01□□□□□ -1.77not detected
MSM1YGR171C HRB1P38922 454 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
MSM1YGR171C SPC72P39723 622 aa4.01□□□□□ -1.77
MSM1YGR171C FTR1P40088 404 aa4.01□□□□□ -1.77
MSM1YGR171C RFX1P48743 811 aa4.01□□□□□ -1.77
MSM1YGR171C YAP1802P53309 568 aa4.01□□□□□ -1.77
MSM1YGR171C GTR1Q00582 310 aa4.01□□□□□ -1.77
MSM1YGR171C KIN4Q01919 800 aa4.01□□□□□ -1.77
MSM1YGR171C AIM41Q12032 185 aa4.01□□□□□ -1.77
MSM1YGR171C CHS5Q12114 671 aaKnown RBP4.01□□□□□ -1.77
MSM1YGR171C SIR3P06701 978 aa4□□□□□ -1.77
MSM1YGR171C HMG2P12684 1045 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms