RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W BEM2P39960 2167 aaKnown RBP6.38□□□□□ -1.39
RPN11YFR004W HIS5P07172 385 aa6.37□□□□□ -1.39
RPN11YFR004W ATP1P07251 545 aaKnown RBP6.37□□□□□ -1.39
RPN11YFR004W SPE1P08432 466 aa6.37□□□□□ -1.39
RPN11YFR004W COY1P34237 679 aa6.37□□□□□ -1.39
RPN11YFR004W YKL050CP35736 922 aa6.37□□□□□ -1.39
RPN11YFR004W PGM2P37012 569 aaKnown RBP6.37□□□□□ -1.39
RPN11YFR004W HMT1P38074 348 aa6.37□□□□□ -1.39
RPN11YFR004W TDA3P38758 523 aa6.37□□□□□ -1.39
RPN11YFR004W RPN3P40016 523 aaKnown RBP6.37□□□□□ -1.39
RPN11YFR004W YNL320WP42840 284 aa6.37□□□□□ -1.39
RPN11YFR004W MNP1P53163 194 aaPredicted RBP6.37□□□□□ -1.39
RPN11YFR004W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39 RIP-Chip
RPN11YFR004W YLR297WQ05899 129 aa6.37□□□□□ -1.39
RPN11YFR004W SDH5Q08230 162 aa6.37□□□□□ -1.39
RPN11YFR004W APL5Q08951 932 aaKnown RBP6.37□□□□□ -1.39
RPN11YFR004W ZRT2Q12436 422 aa6.37□□□□□ -1.39
RPN11YFR004W RPS9AO13516 197 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W ARG4P04076 463 aaPredicted RBP6.36□□□□□ -1.39
RPN11YFR004W SWI5P08153 709 aa6.36□□□□□ -1.39
RPN11YFR004W PCK1P10963 549 aa6.36□□□□□ -1.39
RPN11YFR004W PHO8P11491 566 aa6.36□□□□□ -1.39
RPN11YFR004W TCP1P12612 559 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W CHS2P14180 963 aa6.36□□□□□ -1.39
RPN11YFR004W KIP2P28743 706 aa6.36□□□□□ -1.39
RPN11YFR004W NAM7P30771 971 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W GCG1P32656 232 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W SEG2P34250 1132 aa6.36□□□□□ -1.39
RPN11YFR004W HEL1P36113 551 aa6.36□□□□□ -1.39
RPN11YFR004W LAS1P36146 502 aaPredicted RBP6.36□□□□□ -1.39
RPN11YFR004W KTR4P38131 464 aa6.36□□□□□ -1.39
RPN11YFR004W MRX3P38172 270 aa6.36□□□□□ -1.39
RPN11YFR004W OLA1P38219 394 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W SPP381P38282 291 aaPredicted RBP6.36□□□□□ -1.39
RPN11YFR004W ERC1P38767 581 aa6.36□□□□□ -1.39
RPN11YFR004W RPC17P47076 161 aa6.36□□□□□ -1.39
RPN11YFR004W YGR021WP53212 290 aa6.36□□□□□ -1.39
RPN11YFR004W TPO2P53283 614 aa6.36□□□□□ -1.39
RPN11YFR004W ARK1P53974 638 aa6.36□□□□□ -1.39
RPN11YFR004W VTC3Q02725 835 aa6.36□□□□□ -1.39
RPN11YFR004W LEE1Q02799 301 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W ECI1Q05871 280 aa6.36□□□□□ -1.39
RPN11YFR004W STE23Q06010 1027 aa6.36□□□□□ -1.39
RPN11YFR004W CSR1Q06705 408 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W TSR1Q07381 788 aaKnown RBP6.36□□□□□ -1.39
RPN11YFR004W ESC8Q08119 714 aa6.36□□□□□ -1.39
RPN11YFR004W YOL087CQ99247 1116 aa6.36□□□□□ -1.39
RPN11YFR004W HAP2P06774 265 aa6.35□□□□□ -1.39
RPN11YFR004W VPH1P32563 840 aaKnown RBP6.35□□□□□ -1.39
RPN11YFR004W PEX2P32800 271 aa6.35□□□□□ -1.39
RPN11YFR004W VPS35P34110 944 aa6.35□□□□□ -1.39
RPN11YFR004W ECM1P39715 212 aa6.35□□□□□ -1.39
RPN11YFR004W RPS26AP39938 119 aaKnown RBP6.35□□□□□ -1.39
RPN11YFR004W RPS26BP39939 119 aaKnown RBP6.35□□□□□ -1.39
RPN11YFR004W SDS3P40505 327 aa6.35□□□□□ -1.39
RPN11YFR004W LCB2P40970 561 aa6.35□□□□□ -1.39
RPN11YFR004W BFA1P47113 574 aa6.35□□□□□ -1.39
RPN11YFR004W BRO1P48582 844 aa6.35□□□□□ -1.39
RPN11YFR004W ALG12P53730 551 aa6.35□□□□□ -1.39
RPN11YFR004W JJJ1P53863 590 aa6.35□□□□□ -1.39
RPN11YFR004W NCS2P53923 493 aaPredicted RBP6.35□□□□□ -1.39
RPN11YFR004W TIM8P57744 87 aa6.35□□□□□ -1.39
RPN11YFR004W RCR2Q03446 210 aaKnown RBP6.35□□□□□ -1.39
RPN11YFR004W HED1Q03937 162 aa6.35□□□□□ -1.39
RPN11YFR004W NOC3Q07896 663 aaPredicted RBP6.35□□□□□ -1.39
RPN11YFR004W NSE1Q07913 336 aa6.35□□□□□ -1.39
RPN11YFR004W DNL4Q08387 944 aaPredicted RBP6.35□□□□□ -1.39
RPN11YFR004W YPL225WQ08971 146 aaKnown RBP6.35□□□□□ -1.39
RPN11YFR004W LAA1P39526 2014 aa6.34□□□□□ -1.39
RPN11YFR004W PRP9P19736 530 aaKnown RBP6.34□□□□□ -1.39
RPN11YFR004W PGS1P25578 521 aa6.34□□□□□ -1.39
RPN11YFR004W SKG6P32900 734 aaPredicted RBP6.34□□□□□ -1.39
RPN11YFR004W ATG19P35193 415 aa6.34□□□□□ -1.39
RPN11YFR004W RRP14P36080 434 aaKnown RBP6.34□□□□□ -1.39
RPN11YFR004W RCK2P38623 610 aa6.34□□□□□ -1.39
RPN11YFR004W CCT2P39076 527 aaKnown RBP6.34□□□□□ -1.39
RPN11YFR004W KAP123P40069 1113 aaKnown RBP6.34□□□□□ -1.39
RPN11YFR004W AIR1P40507 360 aaKnown RBP6.34□□□□□ -1.39
RPN11YFR004W HXT8P40886 569 aa6.34□□□□□ -1.39
RPN11YFR004W AVT1P47082 602 aa6.34□□□□□ -1.39
RPN11YFR004W COS5P47187 383 aa6.34□□□□□ -1.39
RPN11YFR004W NUT1P53114 1132 aa6.34□□□□□ -1.39
RPN11YFR004W YNL146WP53906 100 aa6.34□□□□□ -1.39
RPN11YFR004W SYH1Q02875 849 aaKnown RBP6.34□□□□□ -1.39
RPN11YFR004W RPN4Q03465 531 aa6.34□□□□□ -1.39
RPN11YFR004W YMR018WQ04364 514 aa6.34□□□□□ -1.39
RPN11YFR004W YDR278CQ05612 105 aa6.34□□□□□ -1.39
RPN11YFR004W ECM7Q06200 448 aa6.34□□□□□ -1.39
RPN11YFR004W IES4Q08561 116 aa6.34□□□□□ -1.39
RPN11YFR004W AIM41Q12032 185 aa6.34□□□□□ -1.39
RPN11YFR004W SLX4Q12098 748 aa6.34□□□□□ -1.39
RPN11YFR004W SPO21Q12411 609 aa6.34□□□□□ -1.39
RPN11YFR004W JIP3O13555 125 aa6.33□□□□□ -1.4
RPN11YFR004W DBP5P20449 482 aaKnown RBP6.33□□□□□ -1.4
RPN11YFR004W SGF29P25554 259 aa6.33□□□□□ -1.4
RPN11YFR004W CYS3P31373 394 aaKnown RBP6.33□□□□□ -1.4
RPN11YFR004W CDC11P32458 415 aa6.33□□□□□ -1.4
RPN11YFR004W COT1P32798 439 aa6.33□□□□□ -1.4
RPN11YFR004W UBC6P33296 250 aaPredicted RBP6.33□□□□□ -1.4
RPN11YFR004W TRZ1P36159 838 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms