RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeast

Gene OTU1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OTU1	YFL044C	EFT1	P32324	842 aa	Known RBP	4.24	□□□□□ -1.73
OTU1	YFL044C	IMP2'	P32351	346 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	HBS1	P32769	611 aa	Known RBP	4.24	□□□□□ -1.73
OTU1	YFL044C	SWE1	P32944	819 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	DRE2	P36152	348 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	YBR284W	P38150	797 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	PMC1	P38929	1173 aa	Predicted RBP	4.24	□□□□□ -1.73
OTU1	YFL044C	PIK1	P39104	1066 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	GEM1	P39722	662 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	YFL052W	P43551	465 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
OTU1	YFL044C	HLJ1	P48353	224 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	GCV2	P49095	1034 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	SRP1	Q02821	542 aa	Known RBP	4.24	□□□□□ -1.73
OTU1	YFL044C	PNG1	Q02890	363 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	UGO1	Q03327	502 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	YDR341C	Q05506	607 aa	Known RBP	4.24	□□□□□ -1.73
OTU1	YFL044C	CRD1	Q07560	283 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	NBA1	Q08229	501 aa	Known RBP	4.24	□□□□□ -1.73
OTU1	YFL044C	TRE1	Q08919	783 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	HIF1	Q12373	385 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	LAA1	P39526	2014 aa		4.24	□□□□□ -1.73
OTU1	YFL044C	PRC1	P00729	532 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	TOM70	P07213	617 aa	Known RBP	4.23	□□□□□ -1.73
OTU1	YFL044C	SAM35	P14693	329 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	SNF5	P18480	905 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	MEF1	P25039	761 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	BAP2	P38084	609 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	RFS1	P38234	210 aa	Known RBP	4.23	□□□□□ -1.73
OTU1	YFL044C	YHL026C	P38740	315 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	ESL1	P40456	1118 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	GPD2	P41911	440 aa	Known RBP	4.23	□□□□□ -1.73
OTU1	YFL044C	YFL054C	P43549	646 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	YNL134C	P53912	376 aa	Known RBP	4.23	□□□□□ -1.73
OTU1	YFL044C	RSB1	Q08417	382 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	HFI1	Q12060	488 aa		4.23	□□□□□ -1.73
OTU1	YFL044C	CYC7	P00045	113 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	ADE2	P21264	571 aa	Known RBP	4.22	□□□□□ -1.73
OTU1	YFL044C	IMG2	P25642	146 aa	Predicted RBP	4.22	□□□□□ -1.73
OTU1	YFL044C	PRO1	P32264	428 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	SLA2	P33338	968 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	DID4	P36108	232 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	OPY1	P38271	328 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	PEX7	P39108	375 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	SAH1	P39954	449 aa	Known RBP	4.22	□□□□□ -1.73
OTU1	YFL044C	FAF1	P40546	346 aa	Predicted RBP	4.22	□□□□□ -1.73
OTU1	YFL044C	SAD1	P43589	448 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	YGR237C	P50089	785 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	ALT2	P52892	507 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	YGL138C	P53122	345 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	RET3	P53600	189 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	COQ9	Q05779	260 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	RCL1	Q08096	367 aa	Predicted RBP	4.22	□□□□□ -1.73
OTU1	YFL044C	IRC10	Q08118	586 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	MED7	Q08278	222 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	TMA17	Q12513	150 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	PCD1	Q12524	340 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	CSF1	Q12150	2958 aa		4.22	□□□□□ -1.73
OTU1	YFL044C	ADE8	P04161	214 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	WHI2	P12611	486 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	MRC1	P25588	1096 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	CDC12	P32468	407 aa	Known RBP	4.21	□□□□□ -1.74
OTU1	YFL044C	SAS3	P34218	831 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	BMH2	P34730	273 aa	Known RBP	4.21	□□□□□ -1.74
OTU1	YFL044C	YRO2	P38079	344 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	RXT2	P38255	430 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	PTC7	P38797	343 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	YHR202W	P38887	602 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	DSS1	P39112	969 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	MOB1	P40484	314 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	SPO22	P40511	975 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	FIS1	P40515	155 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	GTS1	P40956	396 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
OTU1	YFL044C	YJR120W	P47157	116 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	BNI5	P53890	448 aa	Known RBP	4.21	□□□□□ -1.74
OTU1	YFL044C	MFM1	Q02783	413 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	HCR1	Q05775	265 aa	Known RBP	4.21	□□□□□ -1.74
OTU1	YFL044C	RSC58	Q07979	502 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	SMC5	Q08204	1093 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	YPR071W	Q12346	211 aa		4.21	□□□□□ -1.74
OTU1	YFL044C	BET2	P20133	325 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	PRP22	P24384	1145 aa	Known RBP	4.2	□□□□□ -1.74
OTU1	YFL044C	ADK2	P26364	225 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	SEC21	P32074	935 aa	Known RBP	4.2	□□□□□ -1.74
OTU1	YFL044C	SEC6	P32844	805 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	AIM26	P32858	118 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	DOM34	P33309	386 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	RIM4	P38741	713 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	SIT1	P39980	628 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	PCI8	P40512	444 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	PEX8	P53248	589 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	SUB1	P54000	292 aa	Known RBP	4.2	□□□□□ -1.74
OTU1	YFL044C	SSY1	Q03770	852 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	HRQ1	Q05549	1077 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	THI73	Q07904	523 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	SGO1	Q08490	590 aa		4.2	□□□□□ -1.74
OTU1	YFL044C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
OTU1	YFL044C	PGA3	Q12746	312 aa	Known RBP	4.2	□□□□□ -1.74
OTU1	YFL044C	TRP3	P00937	484 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms