RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	MNN10	P50108	393 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	YNR071C	P53757	342 aa		4.04	□□□□□ -1.76
PMI40	YER003C	MRPL13	Q02204	264 aa		4.04	□□□□□ -1.76
PMI40	YER003C	SLU7	Q02775	382 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	NRG1	Q03125	231 aa		4.04	□□□□□ -1.76
PMI40	YER003C	CLU1	Q03690	1277 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	ENT2	Q05785	613 aa		4.04	□□□□□ -1.76
PMI40	YER003C	TMA10	Q06177	86 aa		4.04	□□□□□ -1.76
PMI40	YER003C	VPS36	Q06696	566 aa		4.04	□□□□□ -1.76
PMI40	YER003C	ESC8	Q08119	714 aa		4.04	□□□□□ -1.76
PMI40	YER003C	CLF1	Q12309	687 aa	Predicted RBP	4.04	□□□□□ -1.76
PMI40	YER003C	DBP10	Q12389	995 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	PHO5	P00635	467 aa		4.03	□□□□□ -1.76
PMI40	YER003C	MIS1	P09440	975 aa	Known RBP	4.03	□□□□□ -1.76
PMI40	YER003C	SIR1	P21691	654 aa		4.03	□□□□□ -1.76
PMI40	YER003C	YCL049C	P25577	312 aa		4.03	□□□□□ -1.76
PMI40	YER003C	PRE4	P30657	266 aa		4.03	□□□□□ -1.76
PMI40	YER003C	IMP2'	P32351	346 aa		4.03	□□□□□ -1.76
PMI40	YER003C	MTC7	P32633	139 aa		4.03	□□□□□ -1.76
PMI40	YER003C	LST4	P34239	828 aa		4.03	□□□□□ -1.76
PMI40	YER003C	CTF13	P35203	478 aa		4.03	□□□□□ -1.76
PMI40	YER003C	RPP1	P38786	293 aa		4.03	□□□□□ -1.76
PMI40	YER003C	PUG1	P40100	303 aa		4.03	□□□□□ -1.76
PMI40	YER003C	FAF1	P40546	346 aa	Predicted RBP	4.03	□□□□□ -1.76
PMI40	YER003C	MNT3	P40549	630 aa		4.03	□□□□□ -1.76
PMI40	YER003C	NOP9	P47077	666 aa	Known RBP	4.03	□□□□□ -1.76
PMI40	YER003C	COX18	P53239	316 aa		4.03	□□□□□ -1.76
PMI40	YER003C	ARC35	P53731	342 aa	Known RBP	4.03	□□□□□ -1.76
PMI40	YER003C	ESF2	P53743	316 aa	Known RBP	4.03	□□□□□ -1.76
PMI40	YER003C	TEX1	P53851	422 aa	Known RBP	4.03	□□□□□ -1.76
PMI40	YER003C	YMR018W	Q04364	514 aa		4.03	□□□□□ -1.76
PMI40	YER003C	GAD1	Q04792	585 aa		4.03	□□□□□ -1.76
PMI40	YER003C	DIA2	Q08496	732 aa	Predicted RBP	4.03	□□□□□ -1.76
PMI40	YER003C	MCH5	Q08777	521 aa		4.03	□□□□□ -1.76
PMI40	YER003C	HOS1	Q12214	470 aa		4.03	□□□□□ -1.76
PMI40	YER003C	POM34	Q12445	299 aa		4.03	□□□□□ -1.76
PMI40	YER003C	ATG11	Q12527	1178 aa		4.03	□□□□□ -1.76
PMI40	YER003C	TUF1	P02992	437 aa	Known RBP	4.02	□□□□□ -1.77
PMI40	YER003C	NUC1	P08466	329 aa		4.02	□□□□□ -1.77
PMI40	YER003C	RNR1	P21524	888 aa	Known RBP	4.02	□□□□□ -1.77
PMI40	YER003C	KIN82	P25341	720 aa		4.02	□□□□□ -1.77
PMI40	YER003C	RMA1	P36001	430 aa	Known RBP	4.02	□□□□□ -1.77
PMI40	YER003C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
PMI40	YER003C	KAP123	P40069	1113 aa	Known RBP	4.02	□□□□□ -1.77
PMI40	YER003C	YNL195C	P40168	261 aa		4.02	□□□□□ -1.77
PMI40	YER003C	TMA108	P40462	946 aa		4.02	□□□□□ -1.77
PMI40	YER003C	PRM2	P40534	656 aa		4.02	□□□□□ -1.77
PMI40	YER003C	MCM6	P53091	1017 aa	Known RBP	4.02	□□□□□ -1.77
PMI40	YER003C	MEP3	P53390	489 aa		4.02	□□□□□ -1.77
PMI40	YER003C	SPO1	P53541	631 aa		4.02	□□□□□ -1.77
PMI40	YER003C	SQS1	P53866	767 aa	Known RBP	4.02	□□□□□ -1.77
PMI40	YER003C	MDM1	Q01846	1127 aa		4.02	□□□□□ -1.77
PMI40	YER003C	IWR1	Q07532	353 aa	Predicted RBP	4.02	□□□□□ -1.77
PMI40	YER003C	CRD1	Q07560	283 aa		4.02	□□□□□ -1.77
PMI40	YER003C	ENB1	Q08299	606 aa		4.02	□□□□□ -1.77
PMI40	YER003C	YDR056C	Q12025	205 aa		4.02	□□□□□ -1.77
PMI40	YER003C	TGL5	Q12043	749 aa		4.02	□□□□□ -1.77
PMI40	YER003C	HMG2	P12684	1045 aa		4.01	□□□□□ -1.77
PMI40	YER003C	NCP1	P16603	691 aa	Known RBP	4.01	□□□□□ -1.77
PMI40	YER003C	UBC1	P21734	215 aa	Known RBP	4.01	□□□□□ -1.77
PMI40	YER003C	PEX1	P24004	1043 aa		4.01	□□□□□ -1.77
PMI40	YER003C	CLB4	P24871	460 aa		4.01	□□□□□ -1.77
PMI40	YER003C	ERG6	P25087	383 aa	Known RBP	4.01	□□□□□ -1.77
PMI40	YER003C	MPE1	P35728	441 aa	Known RBP	4.01	□□□□□ -1.77
PMI40	YER003C	NPR3	P38742	1146 aa		4.01	□□□□□ -1.77
PMI40	YER003C	TAH11	P47112	604 aa		4.01	□□□□□ -1.77
PMI40	YER003C	CTK1	Q03957	528 aa	Known RBP	4.01	□□□□□ -1.77
PMI40	YER003C	URN1	Q06525	465 aa	Known RBP	4.01	□□□□□ -1.77
PMI40	YER003C	AAD4	Q07747	329 aa		4.01	□□□□□ -1.77
PMI40	YER003C	HRP1	Q99383	534 aa	Known RBP	4.01	□□□□□ -1.77
PMI40	YER003C	URA3	P03962	267 aa		4	□□□□□ -1.77
PMI40	YER003C	RPS9B	P05755	195 aa	Known RBP	4	□□□□□ -1.77
PMI40	YER003C	POL3	P15436	1097 aa		4	□□□□□ -1.77
PMI40	YER003C	KAR4	P25583	335 aa		4	□□□□□ -1.77
PMI40	YER003C	DCG1	P32460	244 aa		4	□□□□□ -1.77
PMI40	YER003C	FRD1	P32614	470 aa	Known RBP	4	□□□□□ -1.77
PMI40	YER003C	RPT3	P33298	428 aa	Known RBP	4	□□□□□ -1.77
PMI40	YER003C	SLC1	P33333	303 aa		4	□□□□□ -1.77
PMI40	YER003C	MRPL36	P36531	177 aa		4	□□□□□ -1.77
PMI40	YER003C	CDS1	P38221	457 aa		4	□□□□□ -1.77
PMI40	YER003C	BNA1	P47096	177 aa		4	□□□□□ -1.77
PMI40	YER003C	MDR1	P53258	950 aa		4	□□□□□ -1.77
PMI40	YER003C	TSR2	Q06672	205 aa	Known RBP	4	□□□□□ -1.77
PMI40	YER003C	MED1	Q12321	566 aa		4	□□□□□ -1.77
PMI40	YER003C	ECM3	Q99252	613 aa		4	□□□□□ -1.77
PMI40	YER003C	INH1	P01097	85 aa		3.99	□□□□□ -1.77
PMI40	YER003C	LEU2	P04173	364 aa	Predicted RBP	3.99	□□□□□ -1.77
PMI40	YER003C	SEC15	P22224	910 aa		3.99	□□□□□ -1.77
PMI40	YER003C	ARG1	P22768	420 aa		3.99	□□□□□ -1.77
PMI40	YER003C	CAD1	P24813	409 aa	Known RBP	3.99	□□□□□ -1.77
PMI40	YER003C	CTS1	P29029	562 aa		3.99	□□□□□ -1.77
PMI40	YER003C	JNM1	P36224	373 aa		3.99	□□□□□ -1.77
PMI40	YER003C	GIP4	P39732	760 aa		3.99	□□□□□ -1.77
PMI40	YER003C	GET2	P40056	285 aa		3.99	□□□□□ -1.77
PMI40	YER003C	PSF2	P40359	213 aa		3.99	□□□□□ -1.77
PMI40	YER003C	BAP3	P41815	604 aa		3.99	□□□□□ -1.77
PMI40	YER003C	GSM1	P42950	618 aa		3.99	□□□□□ -1.77
PMI40	YER003C	YDL183C	P48569	320 aa		3.99	□□□□□ -1.77
PMI40	YER003C	CTF18	P49956	741 aa		3.99	□□□□□ -1.77
PMI40	YER003C	IMA1	P53051	589 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms