RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	ECM16	Q04217	1267 aa	Known RBP	5.02	□□□□□ -1.61
SHE1	YBL031W	ATG11	Q12527	1178 aa		5.02	□□□□□ -1.61
SHE1	YBL031W	MPD2	Q99316	277 aa		5.02	□□□□□ -1.61
SHE1	YBL031W	YEF3	P16521	1044 aa	Known RBP	5.01	□□□□□ -1.61
SHE1	YBL031W	PET127	P32606	800 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	LST4	P34239	828 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	FAT1	P38225	669 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	YIR014W	P40570	242 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	IES1	P43579	692 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	SUN4	P53616	420 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	MET14	Q02196	202 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	VMS1	Q04311	632 aa	Known RBP	5.01	□□□□□ -1.61
SHE1	YBL031W	GAD1	Q04792	585 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	TMA10	Q06177	86 aa		5.01	□□□□□ -1.61
SHE1	YBL031W	BCK1	Q01389	1478 aa		5	□□□□□ -1.61
SHE1	YBL031W	NUP188	P52593	1655 aa	Known RBP	5	□□□□□ -1.61
SHE1	YBL031W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
SHE1	YBL031W	CAD1	P24813	409 aa	Known RBP	5	□□□□□ -1.61
SHE1	YBL031W	YKL133C	P36066	463 aa		5	□□□□□ -1.61
SHE1	YBL031W	SRP68	P38687	599 aa	Known RBP	5	□□□□□ -1.61
SHE1	YBL031W	RTR1	P40084	226 aa	Predicted RBP	5	□□□□□ -1.61
SHE1	YBL031W	VID28	P40547	921 aa		5	□□□□□ -1.61
SHE1	YBL031W	RSC8	P43609	557 aa	Known RBP	5	□□□□□ -1.61
SHE1	YBL031W	PAP2	P53632	584 aa	Known RBP	5	□□□□□ -1.61
SHE1	YBL031W	EAF7	P53911	425 aa	Known RBP	5	□□□□□ -1.61
SHE1	YBL031W	MLC2	Q06580	163 aa		5	□□□□□ -1.61
SHE1	YBL031W	YRF1-4	O13559	1382 aa		5	□□□□□ -1.61
SHE1	YBL031W	YML133C	Q03099	1374 aa		5	□□□□□ -1.61
SHE1	YBL031W	YLL067C	Q07888	1374 aa		5	□□□□□ -1.61
SHE1	YBL031W	DNF2	Q12675	1612 aa		5	□□□□□ -1.61
SHE1	YBL031W	YLL066C	Q99208	1374 aa		5	□□□□□ -1.61
SHE1	YBL031W	ERG20	P08524	352 aa	Known RBP	4.99	□□□□□ -1.61
SHE1	YBL031W	GLN4	P13188	809 aa	Known RBP	4.99	□□□□□ -1.61
SHE1	YBL031W	PWP2	P25635	923 aa	Known RBP	4.99	□□□□□ -1.61
SHE1	YBL031W	PTP2	P29461	750 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	VPS24	P36095	224 aa	Known RBP	4.99	□□□□□ -1.61
SHE1	YBL031W	YHR112C	P38716	378 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	DUN1	P39009	513 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	MNN10	P50108	393 aa	Known RBP	4.99	□□□□□ -1.61
SHE1	YBL031W	PIP2	P52960	996 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	SLI1	P53304	468 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	CNM67	P53865	581 aa	Known RBP	4.99	□□□□□ -1.61
SHE1	YBL031W	NSE5	Q03718	556 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	PPN1	Q04119	674 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	ISA1	Q07821	250 aa	Predicted RBP	4.99	□□□□□ -1.61
SHE1	YBL031W	VHS3	Q08438	674 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	SGO1	Q08490	590 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	TGL5	Q12043	749 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	PSK1	P31374	1356 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	DOP1	Q03921	1698 aa		4.99	□□□□□ -1.61
SHE1	YBL031W	RAD9	P14737	1309 aa		4.98	□□□□□ -1.61
SHE1	YBL031W	CDC26	P14724	124 aa		4.98	□□□□□ -1.61
SHE1	YBL031W	FRS1	P15624	595 aa	Known RBP	4.98	□□□□□ -1.61
SHE1	YBL031W	MF(ALPHA)2	P32435	120 aa		4.98	□□□□□ -1.61
SHE1	YBL031W	RIM4	P38741	713 aa		4.98	□□□□□ -1.61
SHE1	YBL031W	AMA1	P50082	593 aa		4.98	□□□□□ -1.61
SHE1	YBL031W	TEX1	P53851	422 aa	Known RBP	4.98	□□□□□ -1.61
SHE1	YBL031W	UBX4	P54730	416 aa		4.98	□□□□□ -1.61
SHE1	YBL031W	CEF1	Q03654	590 aa	Predicted RBP	4.98	□□□□□ -1.61
SHE1	YBL031W	ECM38	Q05902	660 aa	Predicted RBP	4.98	□□□□□ -1.61
SHE1	YBL031W	RRP6	Q12149	733 aa	Known RBP	4.98	□□□□□ -1.61
SHE1	YBL031W	TRP4	P07285	380 aa	Predicted RBP	4.97	□□□□□ -1.61
SHE1	YBL031W	MET3	P08536	511 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	LAT1	P12695	482 aa	Known RBP	4.97	□□□□□ -1.61
SHE1	YBL031W	RNR1	P21524	888 aa	Known RBP	4.97	□□□□□ -1.61
SHE1	YBL031W	PRP22	P24384	1145 aa	Known RBP	4.97	□□□□□ -1.61
SHE1	YBL031W	KCC4	P25389	1037 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	DPB3	P27344	201 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	DCG1	P32460	244 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	HXT4	P32467	576 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	RRP8	P38961	392 aa	Known RBP	4.97	□□□□□ -1.61
SHE1	YBL031W	COX18	P53239	316 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	ERG5	P54781	538 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	CTK1	Q03957	528 aa	Known RBP	4.97	□□□□□ -1.61
SHE1	YBL031W	VBA4	Q04602	768 aa	Known RBP	4.97	□□□□□ -1.61
SHE1	YBL031W	YPS7	Q06325	596 aa		4.97	□□□□□ -1.61
SHE1	YBL031W	GAL1	P04385	528 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	PFK1	P16861	987 aa	Known RBP	4.96	□□□□□ -1.62
SHE1	YBL031W	IME1	P21190	360 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	ATP12	P22135	325 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	PRD1	P25375	712 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	DGR2	P32330	852 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	MAM1	P40065	302 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	AIM21	P40563	679 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	YIR042C	P40586	236 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	FKH2	P41813	862 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	MRPS35	P53292	345 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	MTD1	Q02046	320 aa	Known RBP	4.96	□□□□□ -1.62
SHE1	YBL031W	YML122C	Q03207	126 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	DLT1	Q04216	342 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	STP4	Q07351	490 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	PSF3	Q12146	194 aa		4.96	□□□□□ -1.62
SHE1	YBL031W	KRE5	P22023	1365 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	KIN82	P25341	720 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	YPT7	P32939	208 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	KTR4	P38131	464 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	SAW1	P39735	261 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	SSP120	P39931	234 aa	Known RBP	4.95	□□□□□ -1.62
SHE1	YBL031W	PXA1	P41909	870 aa		4.95	□□□□□ -1.62
SHE1	YBL031W	IRC5	P43610	853 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 276.3 ms