RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 PRPF38AQ8NAV1 312 aaKnown RBP9.14□□□□□ -0.95
CLN5-217ENST00000637278 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 CAMKK2Q96RR4 588 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 VTI1BQ9UEU0 232 aa9.14□□□□□ -0.95
CLN5-217ENST00000637278 TNS2Q63HR2 1409 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 NHSQ6T4R5 1651 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 ARHGEF25Q86VW2 580 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 PAF1Q8N7H5 531 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 RSPH1Q8WYR4 309 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 TIGD1Q96MW7 591 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 FMNL2Q96PY5 1086 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 CARD11Q9BXL7 1154 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 DAAM1Q9Y4D1 1078 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 NPHP1O15259 732 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 ZNF771Q7L3S4 317 aaPredicted RBP9.13□□□□□ -0.95
CLN5-217ENST00000637278 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
CLN5-217ENST00000637278 RNF34Q969K3 372 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 ZNF396Q96N95 335 aaPredicted RBP9.13□□□□□ -0.95
CLN5-217ENST00000637278 SMAD5Q99717 465 aaKnown RBP9.13□□□□□ -0.95
CLN5-217ENST00000637278 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
CLN5-217ENST00000637278 IPO5O00410 1097 aaKnown RBP9.12□□□□□ -0.95
CLN5-217ENST00000637278 APBA3O96018 575 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 EN1Q05925 392 aaPredicted RBP9.12□□□□□ -0.95
CLN5-217ENST00000637278 PTK7Q13308 1070 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 RSBN1LQ6PCB5 846 aaPredicted RBP9.12□□□□□ -0.95
CLN5-217ENST00000637278 TAF4BQ92750 862 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 IRAK4Q9NWZ3 460 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 ESYT3A0FGR9 886 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 TULP2O00295 520 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 ZNF76P36508 570 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 CCDC15Q0P6D6 951 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 DPYDQ12882 1025 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 DDB1Q16531 1140 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 ICE2Q659A1 982 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 TOM1L2Q6ZVM7 507 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 MORC1Q86VD1 984 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 SIN3AQ96ST3 1273 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 DDX49Q9Y6V7 483 aaKnown RBP9.12□□□□□ -0.95
CLN5-217ENST00000637278 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 CD163L1Q9NR16 1453 aa9.12□□□□□ -0.95
CLN5-217ENST00000637278 TRIM37O94972 964 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 SCGB1D2O95969 90 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 SRGNP10124 158 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 ZBED6P86452 979 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 ARID5AQ03989 594 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 LMBRD2Q68DH5 695 aaPredicted RBP9.11□□□□□ -0.95
CLN5-217ENST00000637278 B4GALNT3Q6L9W6 998 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 OGFOD1Q8N543 542 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 SCYL1Q96KG9 808 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLN5-217ENST00000637278 TGIF2Q9GZN2 237 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 RABL2BQ9UNT1 228 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 hCG_1984214I3L0E3 225 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 PLSCR1O15162 318 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 FGRP09769 529 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 PPP2R5AQ15172 486 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 JMYQ8N9B5 988 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 UHMK1Q8TAS1 419 aaKnown RBP9.11□□□□□ -0.95
CLN5-217ENST00000637278 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
CLN5-217ENST00000637278 ZHX3Q9H4I2 956 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
CLN5-217ENST00000637278 USP17L5A8MUK1 530 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 H0YHG0 523 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 SARNPP82979 210 aaKnown RBP9.1□□□□□ -0.95
CLN5-217ENST00000637278 NR6A1Q15406 480 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 TSGA10IPQ3SY00 556 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 CDC37L1Q7L3B6 337 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 MRS2Q9HD23 443 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 RTL1A6NKG5 1358 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 SHTN1A0MZ66 631 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 SKIP12755 728 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 MAP3K9P80192 1104 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 IFT88Q13099 833 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 PNISRQ8TF01 805 aaKnown RBP9.1□□□□□ -0.95
CLN5-217ENST00000637278 TMX1Q9H3N1 280 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 NOB1Q9ULX3 412 aaKnown RBP9.1□□□□□ -0.95
CLN5-217ENST00000637278 CASZ1Q86V15 1759 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 LILRB3O75022 631 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 EZH2Q15910 746 aaKnown RBP9.1□□□□□ -0.95
CLN5-217ENST00000637278 ARL10Q8N8L6 244 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 TIFAQ96CG3 184 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 MED4Q9NPJ6 270 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 ENAMQ9NRM1 1142 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 TOMM22Q9NS69 142 aa9.1□□□□□ -0.95
CLN5-217ENST00000637278 OATP04181 439 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 L1TD1Q5T7N2 865 aaKnown RBP9.09□□□□□ -0.95
CLN5-217ENST00000637278 SWAP70Q9UH65 585 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 TAGLN3Q9UI15 199 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 HMGB2P26583 209 aaKnown RBP9.09□□□□□ -0.95
CLN5-217ENST00000637278 COPB2P35606 906 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 CLDN10P78369 228 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 GPSM2P81274 684 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 BRD3Q15059 726 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 BRDTQ58F21 947 aaPredicted RBP9.09□□□□□ -0.95
CLN5-217ENST00000637278 DPY19L2Q6NUT2 758 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 MNS1Q8NEH6 495 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 SH3TC2Q8TF17 1288 aa9.09□□□□□ -0.95
CLN5-217ENST00000637278 ZNF408Q9H9D4 720 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms