RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 ZNF280AP59817 542 aaPredicted RBP2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 FPGSQ05932 587 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 RAB30Q15771 203 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 PKN1Q16512 942 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 NBPF20Q3BBV1 942 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 SUPT20HL1Q3ZLR7 823 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 CRY2Q49AN0 593 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 PPP2R2DQ66LE6 453 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 MCTP2Q6DN12 878 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 FRMD5Q7Z6J6 570 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 FAM178BQ8IXR5 827 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 PXYLP1Q8TE99 480 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 COA7Q96BR5 231 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 ZNF496Q96IT1 587 aaPredicted RBP2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 CRAMP1Q96RY5 1269 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 EYA3Q99504 573 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 MPHOSPH9Q99550 1183 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 FSD1Q9BTV5 496 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 RTFDC1Q9BY42 306 aaPredicted RBP2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 PBX4Q9BYU1 374 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 UPF3BQ9BZI7 483 aaKnown RBP2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 NKX2-4Q9H2Z4 354 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 KCNQ5Q9NR82 932 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 FAM208BQ5VWN6 2430 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 KMT2EQ8IZD2 1858 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 ZNF536O15090 1300 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 ABCC4O15439 1325 aa2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 COL1A1P02452 1464 aaPredicted RBP2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 MAP1BP46821 2468 aaKnown RBP2.39□□□□□ -2.03
SYNGAP1-215ENST00000636443 MAST4O15021 2626 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 TRANK1O15050 2925 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 FASNP49327 2511 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 RTL9Q8NET4 1388 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 TMEM221A6NGB7 291 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 CYSRT1A8MQ03 144 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 M0R296 226 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 MAP3K13O43283 966 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 KRT38O76015 456 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 VIL1P09327 827 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 RAG1P15918 1043 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 HOXA10P31260 410 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 PIP4K2AP48426 406 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 MYO9BQ13459 2157 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 SNAPC2Q13487 334 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 EPHA10Q5JZY3 1008 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 KIAA0319Q5VV43 1072 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 PTCRAQ6ISU1 281 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 RSBN1LQ6PCB5 846 aaPredicted RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 CCDC174Q6PII3 467 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 C17orf99Q6UX52 265 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 CLEC4GQ6UXB4 293 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 EP400NLQ6ZTU2 488 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 SP8Q8IXZ3 490 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 AGBL3Q8NEM8 1001 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 SPATA18Q8TC71 538 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 GBF1Q92538 1859 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 MS4A4AQ96JQ5 239 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 NLRP3Q96P20 1036 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 PARK7Q99497 189 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 ZC3H12CQ9C0D7 883 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 DEFB129Q9H1M3 183 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 VEZTQ9HBM0 779 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 OGDHLQ9ULD0 1010 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 NSFL1CQ9UNZ2 370 aaKnown RBP2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 AK9Q5TCS8 1911 aa2.38□□□□□ -2.03
SYNGAP1-215ENST00000636443 COL4A3Q01955 1670 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 GCN1Q92616 2671 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 UNCXA6NJT0 531 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 PROB1E7EW31 1015 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 PDHXO00330 501 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 WNT10BO00744 389 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 MYO1BO43795 1136 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 BBOX1O75936 387 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 A1BGP04217 495 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 ADRB1P08588 477 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 COL6A1P12109 1028 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 PRKAR2AP13861 404 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 IL9P15248 144 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 KCNA5P22460 613 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 GPTP24298 496 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 DSG3P32926 999 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 TRIM32Q13049 653 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 IRF5Q13568 498 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 LRRC41Q15345 812 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 RSPO4Q2I0M5 234 aaPredicted RBP2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 TRIM60Q495X7 471 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 AMOTQ4VCS5 1084 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 DDX46Q7L014 1031 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 VSIG10Q8N0Z9 540 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 FBXL6Q8N531 539 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 NECTIN2Q92692 538 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 EYA1Q99502 592 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 TEX13AQ9BXU3 409 aaPredicted RBP2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 MTIF3Q9H2K0 278 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 SLC12A5Q9H2X9 1139 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 GGNBP2Q9H3C7 697 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 CERS4Q9HA82 394 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 SLC52A2Q9HAB3 445 aa2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 ZCCHC17Q9NP64 241 aaKnown RBP2.37□□□□□ -2.03
SYNGAP1-215ENST00000636443 BSDC1Q9NW68 430 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms