RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ZNF830Q96NB3 372 aaPredicted RBP11.03□□□□□ -0.64
PDPN-212ENST00000621990 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 R3HCC1Q9Y3T6 440 aaKnown RBP11.03□□□□□ -0.64
PDPN-212ENST00000621990 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
PDPN-212ENST00000621990 GOLGA6L6A8MZA4 724 aa11.02□□□□□ -0.64
PDPN-212ENST00000621990 NOLC1Q14978 699 aaKnown RBP eCLIP11.02□□□□□ -0.64
PDPN-212ENST00000621990 BRAPQ7Z569 592 aa11.02□□□□□ -0.64
PDPN-212ENST00000621990 STRBPQ96SI9 672 aaKnown RBP11.02□□□□□ -0.64
PDPN-212ENST00000621990 ANGEL1Q9UNK9 670 aaKnown RBP11.02□□□□□ -0.64
PDPN-212ENST00000621990 MYH14Q7Z406 1995 aaKnown RBP11.02□□□□□ -0.64
PDPN-212ENST00000621990 SPATA31A1Q5TZJ5 1347 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 BCL9LQ86UU0 1499 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
PDPN-212ENST00000621990 YEATS4O95619 227 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 ZNF165P49910 485 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
PDPN-212ENST00000621990 SUSD4Q5VX71 490 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 ADALQ6DHV7 355 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 SPATA5Q8NB90 893 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 LINC00301Q8NCQ3 95 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 KIAA1524Q8TCG1 905 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 C8orf76Q96K31 380 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.65
PDPN-212ENST00000621990 A0A1B0GUL6 1792 aa11.02□□□□□ -0.65
PDPN-212ENST00000621990 TRDNQ13061 729 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 IQCB1Q15051 598 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 FMR1NBQ8N0W7 255 aaPredicted RBP11.01□□□□□ -0.65
PDPN-212ENST00000621990 ORC3Q9UBD5 711 aaPredicted RBP11.01□□□□□ -0.65
PDPN-212ENST00000621990 WWC3Q9ULE0 1092 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 NID2Q14112 1375 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 KAT6BQ8WYB5 2073 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 RRP9O43818 475 aaKnown RBP11.01□□□□□ -0.65
PDPN-212ENST00000621990 IDH1O75874 414 aaKnown RBP11.01□□□□□ -0.65
PDPN-212ENST00000621990 CAMTA2O94983 1202 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 SLC5A1P13866 664 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 FOSBP53539 338 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 GUCY1B3Q02153 619 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 STX1AQ16623 288 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 PARP10Q53GL7 1025 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 SARM1Q6SZW1 724 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 CCDC73Q6ZRK6 1079 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 CYB5R4Q7L1T6 521 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 KCNG4Q8TDN1 519 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 SYTL4Q96C24 671 aaPredicted RBP11.01□□□□□ -0.65
PDPN-212ENST00000621990 TMEM87BQ96K49 555 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 DNAJC25Q9H1X3 360 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 PCDHA7Q9UN72 937 aa11.01□□□□□ -0.65
PDPN-212ENST00000621990 CDC25BP30305 580 aa11□□□□□ -0.65
PDPN-212ENST00000621990 ZNF75DP51815 510 aa11□□□□□ -0.65
PDPN-212ENST00000621990 RASGRF1Q13972 1273 aa11□□□□□ -0.65
PDPN-212ENST00000621990 SGMS1Q86VZ5 419 aa11□□□□□ -0.65
PDPN-212ENST00000621990 MRPS27Q92552 414 aaKnown RBP11□□□□□ -0.65
PDPN-212ENST00000621990 UTP14AQ9BVJ6 771 aaKnown RBP11□□□□□ -0.65
PDPN-212ENST00000621990 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
PDPN-212ENST00000621990 ME1P48163 572 aa11□□□□□ -0.65
PDPN-212ENST00000621990 PLCB2Q00722 1185 aa11□□□□□ -0.65
PDPN-212ENST00000621990 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
PDPN-212ENST00000621990 MPNDQ8N594 471 aa11□□□□□ -0.65
PDPN-212ENST00000621990 IGDCC4Q8TDY8 1250 aa11□□□□□ -0.65
PDPN-212ENST00000621990 DENND2AQ9ULE3 1009 aa11□□□□□ -0.65
PDPN-212ENST00000621990 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
PDPN-212ENST00000621990 CPLX1O14810 134 aa11□□□□□ -0.65
PDPN-212ENST00000621990 KINO60870 393 aaKnown RBP11□□□□□ -0.65
PDPN-212ENST00000621990 PPFIA3O75145 1194 aa11□□□□□ -0.65
PDPN-212ENST00000621990 MYSM1Q5VVJ2 828 aa11□□□□□ -0.65
PDPN-212ENST00000621990 APOA5Q6Q788 366 aa11□□□□□ -0.65
PDPN-212ENST00000621990 FSIP1Q8NA03 581 aa11□□□□□ -0.65
PDPN-212ENST00000621990 EPB41L4AQ9HCS5 686 aaPredicted RBP11□□□□□ -0.65
PDPN-212ENST00000621990 NEDD4P46934 1319 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 CDKL5O76039 1030 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 NTSR2O95665 410 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 MAP3K12Q12852 859 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 AIDAQ96BJ3 306 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 PRIMPOLQ96LW4 560 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 CASZ1Q86V15 1759 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 LIFRP42702 1097 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 METAP2P50579 478 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDPN-212ENST00000621990 SIK1P57059 783 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 DDB1Q16531 1140 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 CCDC152Q4G0S7 254 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 C11orf57Q6ZUT1 292 aaPredicted RBP10.99□□□□□ -0.65
PDPN-212ENST00000621990 LY9Q9HBG7 655 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 CLIC4Q9Y696 253 aa10.99□□□□□ -0.65
PDPN-212ENST00000621990 UQCRHLA0A096LP55 91 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 KIF28PB7ZC32 967 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 DYNC1I1O14576 645 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 UQCRHP07919 91 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 NTRK3Q16288 839 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 IFNL3Q8IZI9 196 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
PDPN-212ENST00000621990 MPHOSPH8Q99549 860 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 PYCARDQ9ULZ3 195 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 STK36Q9NRP7 1315 aa10.98□□□□□ -0.65
PDPN-212ENST00000621990 COL4A1P02462 1669 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms