RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
NEK3-208ENST00000618534 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
NEK3-208ENST00000618534 PFKFB1P16118 471 aa23.67■■□□□ 1.38
NEK3-208ENST00000618534 KIF23Q02241 960 aaPredicted RBP23.67■■□□□ 1.38
NEK3-208ENST00000618534 NCAPHQ15003 741 aa23.67■■□□□ 1.38
NEK3-208ENST00000618534 LRRFIP1Q32MZ4 808 aaKnown RBP23.67■■□□□ 1.38
NEK3-208ENST00000618534 ANO1Q5XXA6 986 aa23.67■■□□□ 1.38
NEK3-208ENST00000618534 SYNE3Q6ZMZ3 975 aa23.67■■□□□ 1.38
NEK3-208ENST00000618534 XAGE2Q96GT9 111 aa23.67■■□□□ 1.38
NEK3-208ENST00000618534 PPP1R13BQ96KQ4 1090 aa23.67■■□□□ 1.38
NEK3-208ENST00000618534 PUS7LQ9H0K6 701 aaKnown RBP23.67■■□□□ 1.38
NEK3-208ENST00000618534 MORC2Q9Y6X9 1032 aaPredicted RBP23.67■■□□□ 1.38
NEK3-208ENST00000618534 PARP4Q9UKK3 1724 aaKnown RBP23.67■■□□□ 1.38
NEK3-208ENST00000618534 KIF2AO00139 706 aaPredicted RBP23.67■■□□□ 1.38
NEK3-208ENST00000618534 PLEKHG2Q9H7P9 1386 aa23.66■■□□□ 1.38
NEK3-208ENST00000618534 KIF20AO95235 890 aa23.66■■□□□ 1.38
NEK3-208ENST00000618534 SLU7O95391 586 aaKnown RBP23.66■■□□□ 1.38
NEK3-208ENST00000618534 ZFYP08048 801 aaPredicted RBP23.66■■□□□ 1.38
NEK3-208ENST00000618534 NCOA7Q8NI08 942 aa23.66■■□□□ 1.38
NEK3-208ENST00000618534 SFPQP23246 707 aaKnown RBP eCLIP23.65■■□□□ 1.38
NEK3-208ENST00000618534 FBXO38Q6PIJ6 1188 aa23.65■■□□□ 1.38
NEK3-208ENST00000618534 RALYLQ86SE5 291 aaKnown RBP23.65■■□□□ 1.38
NEK3-208ENST00000618534 C19orf44Q9H6X5 657 aa23.65■■□□□ 1.38
NEK3-208ENST00000618534 ZAP70P43403 619 aa23.65■■□□□ 1.38
NEK3-208ENST00000618534 APPBP2Q92624 585 aa23.65■■□□□ 1.38
NEK3-208ENST00000618534 SYTL4Q96C24 671 aaPredicted RBP23.65■■□□□ 1.38
NEK3-208ENST00000618534 WDHD1O75717 1129 aaPredicted RBP23.64■■□□□ 1.38
NEK3-208ENST00000618534 CMA1P23946 247 aa23.64■■□□□ 1.38
NEK3-208ENST00000618534 TPM4P67936 248 aa23.64■■□□□ 1.38
NEK3-208ENST00000618534 ISM2Q6H9L7 571 aa23.64■■□□□ 1.38
NEK3-208ENST00000618534 PI16Q6UXB8 463 aa23.64■■□□□ 1.38
NEK3-208ENST00000618534 C4AP0C0L4 1744 aa23.64■■□□□ 1.38
NEK3-208ENST00000618534 C4BP0C0L5 1744 aa23.64■■□□□ 1.38
NEK3-208ENST00000618534 MARCKSP29966 332 aaPredicted RBP23.64■■□□□ 1.37
NEK3-208ENST00000618534 CCDC57Q2TAC2 916 aa23.64■■□□□ 1.37
NEK3-208ENST00000618534 CCDC85AQ96PX6 553 aaPredicted RBP23.64■■□□□ 1.37
NEK3-208ENST00000618534 LMOD1P29536 600 aaPredicted RBP23.63■■□□□ 1.37
NEK3-208ENST00000618534 AIFM3Q96NN9 605 aa23.63■■□□□ 1.37
NEK3-208ENST00000618534 ZNF213O14771 459 aa23.63■■□□□ 1.37
NEK3-208ENST00000618534 UBR2Q8IWV8 1755 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 GPAA1O43292 621 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 SYT10Q6XYQ8 523 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 DENND2AQ9ULE3 1009 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 AKAP2Q9Y2D5 859 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 KCPQ6ZWJ8 1503 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 PSDA5PKW4 1024 aaPredicted RBP23.62■■□□□ 1.37
NEK3-208ENST00000618534 FANCCQ00597 558 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 HSD3B7Q9H2F3 369 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 CPDO75976 1380 aa23.62■■□□□ 1.37
NEK3-208ENST00000618534 ATP1A3P13637 1013 aa23.61■■□□□ 1.37
NEK3-208ENST00000618534 GABPB1Q06547 395 aaPredicted RBP23.61■■□□□ 1.37
NEK3-208ENST00000618534 SLC39A14Q15043 492 aa23.61■■□□□ 1.37
NEK3-208ENST00000618534 L2HGDHQ9H9P8 463 aa23.61■■□□□ 1.37
NEK3-208ENST00000618534 NPHP1O15259 732 aa23.61■■□□□ 1.37
NEK3-208ENST00000618534 NBPF3Q9H094 633 aa23.61■■□□□ 1.37
NEK3-208ENST00000618534 TAOK2Q9UL54 1235 aa23.61■■□□□ 1.37
NEK3-208ENST00000618534 KCNJ6P48051 423 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 NKX2-3Q8TAU0 364 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 IKBKBO14920 756 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 SYKP43405 635 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 KRT222Q8N1A0 295 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 LRRN4CLQ8ND94 238 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 WDR19Q8NEZ3 1342 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 ALG1Q9BT22 464 aa23.6■■□□□ 1.37
NEK3-208ENST00000618534 MYH7P12883 1935 aa23.59■■□□□ 1.37
NEK3-208ENST00000618534 ISCA1Q9BUE6 129 aa23.59■■□□□ 1.37
NEK3-208ENST00000618534 ZMYM6O95789 1325 aa23.59■■□□□ 1.37
NEK3-208ENST00000618534 RXRAP19793 462 aa23.59■■□□□ 1.37
NEK3-208ENST00000618534 ZNF771Q7L3S4 317 aaPredicted RBP23.59■■□□□ 1.37
NEK3-208ENST00000618534 VPS37DQ86XT2 251 aa23.59■■□□□ 1.37
NEK3-208ENST00000618534 TUBE1Q9UJT0 475 aa23.59■■□□□ 1.37
NEK3-208ENST00000618534 SHC4Q6S5L8 630 aa23.58■■□□□ 1.37
NEK3-208ENST00000618534 TIGD1Q96MW7 591 aa23.58■■□□□ 1.37
NEK3-208ENST00000618534 NRDCO43847 1150 aa23.58■■□□□ 1.36
NEK3-208ENST00000618534 TAF7LQ5H9L4 462 aa23.58■■□□□ 1.36
NEK3-208ENST00000618534 CYB5R4Q7L1T6 521 aa23.58■■□□□ 1.36
NEK3-208ENST00000618534 TBC1D10CQ8IV04 446 aa23.58■■□□□ 1.36
NEK3-208ENST00000618534 DPF2Q92785 391 aa23.58■■□□□ 1.36
NEK3-208ENST00000618534 ANGEL1Q9UNK9 670 aaKnown RBP23.58■■□□□ 1.36
NEK3-208ENST00000618534 HPSEQ9Y251 543 aa23.58■■□□□ 1.36
NEK3-208ENST00000618534 PCDH11XQ9BZA7 1347 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 PCDH11YQ9BZA8 1340 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 ERCC6LQ2NKX8 1250 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 CCDC93Q567U6 631 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 ATF3P18847 181 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 METAP2P50579 478 aaKnown RBP eCLIP23.57■■□□□ 1.36
NEK3-208ENST00000618534 PNOCQ13519 176 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 DHX8Q14562 1220 aaKnown RBP23.57■■□□□ 1.36
NEK3-208ENST00000618534 KRT40Q6A162 431 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 ZNF446Q9NWS9 450 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 FAM53CQ9NYF3 392 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 FBXO3Q9UK99 471 aa23.57■■□□□ 1.36
NEK3-208ENST00000618534 ZNF330Q9Y3S2 320 aaPredicted RBP23.57■■□□□ 1.36
NEK3-208ENST00000618534 SLFN14P0C7P3 912 aa23.56■■□□□ 1.36
NEK3-208ENST00000618534 TRDNQ13061 729 aa23.56■■□□□ 1.36
NEK3-208ENST00000618534 PTPAQ15257 358 aa23.56■■□□□ 1.36
NEK3-208ENST00000618534 ZCRB1Q8TBF4 217 aaKnown RBP23.56■■□□□ 1.36
NEK3-208ENST00000618534 PHKBQ93100 1093 aa23.56■■□□□ 1.36
NEK3-208ENST00000618534 FAM89AQ96GI7 184 aa23.56■■□□□ 1.36
NEK3-208ENST00000618534 TNS3Q68CZ2 1445 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms