RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 COL4A1P02462 1669 aa12.84□□□□□ -0.35
SCN1B-205ENST00000602150 SLC5A1P13866 664 aa12.83□□□□□ -0.35
SCN1B-205ENST00000602150 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.35
SCN1B-205ENST00000602150 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.35
SCN1B-205ENST00000602150 MAGEB6Q8N7X4 407 aa12.83□□□□□ -0.35
SCN1B-205ENST00000602150 SPC24Q8NBT2 197 aa12.83□□□□□ -0.35
SCN1B-205ENST00000602150 RAI14Q9P0K7 980 aa12.83□□□□□ -0.35
SCN1B-205ENST00000602150 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.35
SCN1B-205ENST00000602150 NWD2Q9ULI1 1742 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 SYT1P21579 422 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 PDRG1Q9NUG6 133 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 HMG20BQ9P0W2 317 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 N4BP2Q86UW6 1770 aaPredicted RBP12.83□□□□□ -0.36
SCN1B-205ENST00000602150 STX6O43752 255 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 CIAO1O76071 339 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 PTGS1P23219 599 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 TTC14Q96N46 770 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
SCN1B-205ENST00000602150 PLA2G12BQ9BX93 195 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 BTAF1O14981 1849 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 ATRNO75882 1429 aa12.83□□□□□ -0.36
SCN1B-205ENST00000602150 SMIM22K7EJ46 135 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 ZBTB22O15209 634 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 F13A1P00488 732 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 NAA30Q147X3 362 aaPredicted RBP12.82□□□□□ -0.36
SCN1B-205ENST00000602150 RRP12Q5JTH9 1297 aaKnown RBP12.82□□□□□ -0.36
SCN1B-205ENST00000602150 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 RNF113AO15541 343 aaKnown RBP12.82□□□□□ -0.36
SCN1B-205ENST00000602150 PRKAB2O43741 272 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
SCN1B-205ENST00000602150 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
SCN1B-205ENST00000602150 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 SERPINB2P05120 415 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 CYP21A2P08686 494 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 GYS1P13807 737 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
SCN1B-205ENST00000602150 RUFY3Q7L099 469 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 DDX11Q96FC9 970 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
SCN1B-205ENST00000602150 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
SCN1B-205ENST00000602150 VGLL2Q8N8G2 317 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 LPIN2Q92539 896 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
SCN1B-205ENST00000602150 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 BLOC1S2Q6QNY1 142 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 SPATA5Q8NB90 893 aa12.81□□□□□ -0.36
SCN1B-205ENST00000602150 GPAA1O43292 621 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 CCDC192P0DO97 292 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 RXRAP19793 462 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
SCN1B-205ENST00000602150 SLC20A2Q08357 652 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 FAM200AQ8TCP9 573 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
SCN1B-205ENST00000602150 DDR1Q08345 913 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
SCN1B-205ENST00000602150 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 ATP6V1DQ9Y5K8 247 aa12.8□□□□□ -0.36
SCN1B-205ENST00000602150 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-205ENST00000602150 HIP1O00291 1037 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 MBD4O95243 580 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 LRMPQ12912 555 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 CCDC186Q7Z3E2 898 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 MAP4K1Q92918 833 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 C16orf45Q96MC5 204 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-205ENST00000602150 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-205ENST00000602150 FIBPO43427 364 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 TNNT1P13805 278 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 NECTIN1Q15223 517 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 CLEC4GQ6UXB4 293 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-205ENST00000602150 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 BRF1Q92994 677 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 MRVI1Q9Y6F6 885 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-205ENST00000602150 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 SDR42E1Q8WUS8 393 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCN1B-205ENST00000602150 AIDAQ96BJ3 306 aa12.79□□□□□ -0.36
SCN1B-205ENST00000602150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-205ENST00000602150 C6orf229H3BNL8 230 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 PDE6AP16499 860 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 DNM1Q05193 864 aaKnown RBP12.78□□□□□ -0.36
SCN1B-205ENST00000602150 IPO4Q8TEX9 1081 aaKnown RBP12.78□□□□□ -0.36
SCN1B-205ENST00000602150 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
SCN1B-205ENST00000602150 NRBP1Q9UHY1 535 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 TULP2O00295 520 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 MMP10P09238 476 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 KMT5BQ4FZB7 885 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
SCN1B-205ENST00000602150 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms