RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 NAA16Q6N069 864 aaPredicted RBP20.58■□□□□ 0.89
ERCC2-211ENST00000588652 RALYLQ86SE5 291 aaKnown RBP20.58■□□□□ 0.89
ERCC2-211ENST00000588652 CHMP4CQ96CF2 233 aa20.58■□□□□ 0.89
ERCC2-211ENST00000588652 NGLY1Q96IV0 654 aa20.58■□□□□ 0.89
ERCC2-211ENST00000588652 NBPF3Q9H094 633 aa20.58■□□□□ 0.89
ERCC2-211ENST00000588652 UQCRHLA0A096LP55 91 aa20.58■□□□□ 0.88
ERCC2-211ENST00000588652 UQCRHP07919 91 aa20.58■□□□□ 0.88
ERCC2-211ENST00000588652 CAMK4Q16566 473 aa20.58■□□□□ 0.88
ERCC2-211ENST00000588652 SASS6Q6UVJ0 657 aa20.58■□□□□ 0.88
ERCC2-211ENST00000588652 HOMEZQ8IX15 550 aa20.58■□□□□ 0.88
ERCC2-211ENST00000588652 DACT1Q9NYF0 836 aa20.58■□□□□ 0.88
ERCC2-211ENST00000588652 MRVI1Q9Y6F6 885 aa20.58■□□□□ 0.88
ERCC2-211ENST00000588652 UBE2Q2Q8WVN8 375 aa20.57■□□□□ 0.88
ERCC2-211ENST00000588652 COL4A1P02462 1669 aa20.57■□□□□ 0.88
ERCC2-211ENST00000588652 KCNQ4P56696 695 aa20.57■□□□□ 0.88
ERCC2-211ENST00000588652 TYRO3Q06418 890 aa20.57■□□□□ 0.88
ERCC2-211ENST00000588652 FAM200AQ8TCP9 573 aa20.57■□□□□ 0.88
ERCC2-211ENST00000588652 WDR19Q8NEZ3 1342 aa20.57■□□□□ 0.88
ERCC2-211ENST00000588652 APPP05067 770 aa20.56■□□□□ 0.88
ERCC2-211ENST00000588652 CHRNDQ07001 517 aa20.56■□□□□ 0.88
ERCC2-211ENST00000588652 STRBPQ96SI9 672 aaKnown RBP20.56■□□□□ 0.88
ERCC2-211ENST00000588652 DDX19AQ9NUU7 478 aaKnown RBP20.56■□□□□ 0.88
ERCC2-211ENST00000588652 BCAMP50895 628 aa20.56■□□□□ 0.88
ERCC2-211ENST00000588652 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
ERCC2-211ENST00000588652 RBM43Q6ZSC3 357 aaKnown RBP20.56■□□□□ 0.88
ERCC2-211ENST00000588652 AIDAQ96BJ3 306 aa20.56■□□□□ 0.88
ERCC2-211ENST00000588652 PGBD1Q96JS3 809 aa20.56■□□□□ 0.88
ERCC2-211ENST00000588652 TNMDQ9H2S6 317 aa20.56■□□□□ 0.88
ERCC2-211ENST00000588652 CLSTN2Q9H4D0 955 aa20.55■□□□□ 0.88
ERCC2-211ENST00000588652 PPFIA3O75145 1194 aa20.55■□□□□ 0.88
ERCC2-211ENST00000588652 ERFEQ4G0M1 354 aa20.55■□□□□ 0.88
ERCC2-211ENST00000588652 TBC1D10CQ8IV04 446 aa20.55■□□□□ 0.88
ERCC2-211ENST00000588652 MAGEB6Q8N7X4 407 aa20.55■□□□□ 0.88
ERCC2-211ENST00000588652 CDC5LQ99459 802 aaKnown RBP20.55■□□□□ 0.88
ERCC2-211ENST00000588652 CNTNAP4Q9C0A0 1308 aa20.55■□□□□ 0.88
ERCC2-211ENST00000588652 CASZ1Q86V15 1759 aa20.55■□□□□ 0.88
ERCC2-211ENST00000588652 CARMIL3Q8ND23 1372 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 KLF18A0A0U1RQI7 1052 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 FDPSP14324 419 aaKnown RBP20.54■□□□□ 0.88
ERCC2-211ENST00000588652 FOSBP53539 338 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 TRDNQ13061 729 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 NOLC1Q14978 699 aaKnown RBP eCLIP20.54■□□□□ 0.88
ERCC2-211ENST00000588652 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 DENND2AQ9ULE3 1009 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 HPS5Q9UPZ3 1129 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 CFAP45Q9UL16 551 aa20.54■□□□□ 0.88
ERCC2-211ENST00000588652 TAF1P21675 1872 aa20.53■□□□□ 0.88
ERCC2-211ENST00000588652 ADD1P35611 737 aaKnown RBP20.53■□□□□ 0.88
ERCC2-211ENST00000588652 GOLGA8BA8MQT2 603 aa20.53■□□□□ 0.88
ERCC2-211ENST00000588652 UBAP1LF5GYI3 381 aa20.53■□□□□ 0.88
ERCC2-211ENST00000588652 NR1I2O75469 434 aa20.53■□□□□ 0.88
ERCC2-211ENST00000588652 SF3B3Q15393 1217 aaKnown RBP20.53■□□□□ 0.88
ERCC2-211ENST00000588652 ALX1Q15699 326 aa20.53■□□□□ 0.88
ERCC2-211ENST00000588652 C3orf67Q6ZVT6 689 aa20.53■□□□□ 0.88
ERCC2-211ENST00000588652 SCN7AQ01118 1682 aa20.52■□□□□ 0.88
ERCC2-211ENST00000588652 C17orf53Q8N3J3 647 aaPredicted RBP20.52■□□□□ 0.88
ERCC2-211ENST00000588652 FNBP4Q8N3X1 1017 aaPredicted RBP20.52■□□□□ 0.88
ERCC2-211ENST00000588652 NKX2-3Q8TAU0 364 aa20.52■□□□□ 0.88
ERCC2-211ENST00000588652 BICD2Q8TD16 824 aa20.52■□□□□ 0.88
ERCC2-211ENST00000588652 SPTLC3Q9NUV7 552 aa20.52■□□□□ 0.88
ERCC2-211ENST00000588652 ZMYM6O95789 1325 aa20.52■□□□□ 0.88
ERCC2-211ENST00000588652 A0A1B0GUL6 1792 aa20.52■□□□□ 0.88
ERCC2-211ENST00000588652 PATL2C9JE40 543 aaKnown RBP20.52■□□□□ 0.87
ERCC2-211ENST00000588652 DHX16O60231 1041 aaKnown RBP20.52■□□□□ 0.87
ERCC2-211ENST00000588652 MBD4O95243 580 aa20.52■□□□□ 0.87
ERCC2-211ENST00000588652 LUZP1Q86V48 1076 aa20.52■□□□□ 0.87
ERCC2-211ENST00000588652 ANO6Q4KMQ2 910 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 SMIM5Q71RC9 77 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 CYB5R4Q7L1T6 521 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 ANKRD18AQ8IVF6 992 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 KCNF1Q9H3M0 494 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 EPB41L4AQ9HCS5 686 aaPredicted RBP20.51■□□□□ 0.87
ERCC2-211ENST00000588652 RGL2O15211 777 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 RBM10P98175 930 aaKnown RBP20.51■□□□□ 0.87
ERCC2-211ENST00000588652 IFNL3Q8IZI9 196 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 CBX8Q9HC52 389 aa20.51■□□□□ 0.87
ERCC2-211ENST00000588652 ANGEL1Q9UNK9 670 aaKnown RBP20.51■□□□□ 0.87
ERCC2-211ENST00000588652 BTAF1O14981 1849 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 CHD4Q14839 1912 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 DYNC1I1O14576 645 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 TPM3P06753 285 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 GUCY1B3Q02153 619 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 PDCL3Q9H2J4 239 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 ARMT1Q9H993 441 aa20.5■□□□□ 0.87
ERCC2-211ENST00000588652 DNTTIP2Q5QJE6 756 aaKnown RBP20.49■□□□□ 0.87
ERCC2-211ENST00000588652 B4E1Z4 1266 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 RC3H1Q5TC82 1133 aaKnown RBP20.49■□□□□ 0.87
ERCC2-211ENST00000588652 RAB11FIP4Q86YS3 637 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 SPC24Q8NBT2 197 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 NAPBQ9H115 298 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 BSDC1Q9NW68 430 aaPredicted RBP20.49■□□□□ 0.87
ERCC2-211ENST00000588652 C4AP0C0L4 1744 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 C4BP0C0L5 1744 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 ZNF804BA4D1E1 1349 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 NEDD4P46934 1319 aa20.49■□□□□ 0.87
ERCC2-211ENST00000588652 GOLGA6L6A8MZA4 724 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms