RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 FTOQ9C0B1 505 aaKnown RBP eCLIP27.82■■■□□ 2.043e-7■■■□□ 17.7
NPLOC4-217ENST00000574897 C4AP0C0L4 1744 aa27.82■■■□□ 2.04
NPLOC4-217ENST00000574897 C4BP0C0L5 1744 aa27.82■■■□□ 2.04
NPLOC4-217ENST00000574897 GOLGA8BA8MQT2 603 aa27.81■■■□□ 2.04
NPLOC4-217ENST00000574897 CEBPZQ03701 1054 aaKnown RBP27.81■■■□□ 2.04
NPLOC4-217ENST00000574897 CDC5LQ99459 802 aaKnown RBP27.81■■■□□ 2.04
NPLOC4-217ENST00000574897 SCAND2PQ9GZW5 306 aaPredicted RBP27.81■■■□□ 2.04
NPLOC4-217ENST00000574897 CARMIL3Q8ND23 1372 aa27.81■■■□□ 2.04
NPLOC4-217ENST00000574897 PDLIM2Q96JY6 352 aa27.81■■■□□ 2.04
NPLOC4-217ENST00000574897 GYG1P46976 350 aa27.8■■■□□ 2.04
NPLOC4-217ENST00000574897 PGBD1Q96JS3 809 aa27.8■■■□□ 2.04
NPLOC4-217ENST00000574897 PRKAB2O43741 272 aa27.8■■■□□ 2.04
NPLOC4-217ENST00000574897 ANKRD18AQ8IVF6 992 aa27.8■■■□□ 2.04
NPLOC4-217ENST00000574897 CELF1Q92879 486 aaKnown RBP27.8■■■□□ 2.04
NPLOC4-217ENST00000574897 NEDD4P46934 1319 aa27.8■■■□□ 2.04
NPLOC4-217ENST00000574897 THSD7AQ9UPZ6 1657 aa27.8■■■□□ 2.04
NPLOC4-217ENST00000574897 B4E1Z4 1266 aa27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 GNPATO15228 680 aa27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 GTF2E1P29083 439 aaPredicted RBP27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 SENP2Q9HC62 589 aa27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 NHSQ6T4R5 1651 aa27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 ADD1P35611 737 aaKnown RBP27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 OTUD7BQ6GQQ9 843 aa27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 NAA16Q6N069 864 aaPredicted RBP27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 TACC3Q9Y6A5 838 aa27.79■■■□□ 2.04
NPLOC4-217ENST00000574897 TAF1LQ8IZX4 1826 aa27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 SF3B3Q15393 1217 aaKnown RBP27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 IFNL3Q8IZI9 196 aa27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 LCORLQ8N3X6 602 aa27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 FUCA2Q9BTY2 467 aa27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 ZSCAN16Q9H4T2 348 aaPredicted RBP27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 CTDSPL2Q05D32 466 aa27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 TRDNQ13061 729 aa27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 MIGA1Q8NAN2 632 aa27.78■■■□□ 2.04
NPLOC4-217ENST00000574897 CAMK4Q16566 473 aa27.77■■■□□ 2.04
NPLOC4-217ENST00000574897 COL1A1P02452 1464 aaPredicted RBP27.77■■■□□ 2.04
NPLOC4-217ENST00000574897 PATL2C9JE40 543 aaKnown RBP27.77■■■□□ 2.04
NPLOC4-217ENST00000574897 LETM1O95202 739 aaPredicted RBP27.77■■■□□ 2.04
NPLOC4-217ENST00000574897 RXRAP19793 462 aa27.77■■■□□ 2.04
NPLOC4-217ENST00000574897 GJB4Q9NTQ9 266 aa27.77■■■□□ 2.04
NPLOC4-217ENST00000574897 ILDR1Q86SU0 546 aaPredicted RBP27.76■■■□□ 2.03
NPLOC4-217ENST00000574897 LRP2BPQ9P2M1 347 aa27.76■■■□□ 2.03
NPLOC4-217ENST00000574897 NARFQ9UHQ1 456 aa27.76■■■□□ 2.03
NPLOC4-217ENST00000574897 CCNL1Q9UK58 526 aaPredicted RBP27.76■■■□□ 2.03
NPLOC4-217ENST00000574897 GOLGA6L4A6NEF3 574 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 GSG1L2A8MUP6 293 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 RPS6KA4O75676 772 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 ADGRA1Q86SQ6 560 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 NAPBQ9H115 298 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 DACT1Q9NYF0 836 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 MINPP1Q9UNW1 487 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 SBF2Q86WG5 1849 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 COL24A1Q17RW2 1714 aa27.75■■■□□ 2.03
NPLOC4-217ENST00000574897 ABCF2Q9UG63 623 aa27.74■■■□□ 2.03
NPLOC4-217ENST00000574897 KIF3AQ9Y496 699 aa27.74■■■□□ 2.03
NPLOC4-217ENST00000574897 STK11IPQ8N1F8 1099 aa27.74■■■□□ 2.03
NPLOC4-217ENST00000574897 BSDC1Q9NW68 430 aaPredicted RBP27.74■■■□□ 2.03
NPLOC4-217ENST00000574897 ECM29Q5VYK3 1845 aa27.74■■■□□ 2.03
NPLOC4-217ENST00000574897 EP400Q96L91 3159 aa27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 SH2B2O14492 632 aaPredicted RBP27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 ANGEL1Q9UNK9 670 aaKnown RBP27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 ZNF804BA4D1E1 1349 aa27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 WDR19Q8NEZ3 1342 aa27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 KLRK1P26718 216 aa27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 ALX1Q15699 326 aa27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 USP28Q96RU2 1077 aa27.73■■■□□ 2.03
NPLOC4-217ENST00000574897 CLCN1P35523 988 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 RC3H1Q5TC82 1133 aaKnown RBP27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 SETDB2Q96T68 719 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 NUP62CLQ9H1M0 184 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 ORC3Q9UBD5 711 aaPredicted RBP27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 SLC4A4Q9Y6R1 1079 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 MYH13Q9UKX3 1938 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 NR1I2O75469 434 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 NBPF5PQ86XG9 351 aaPredicted RBP27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 BICD2Q8TD16 824 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 LY75O60449 1722 aa27.72■■■□□ 2.03
NPLOC4-217ENST00000574897 SLC10A5Q5PT55 438 aa27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 CCDC144CPQ8IYA2 1237 aa27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 CACNA1SQ13698 1873 aa27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 BAZ2AQ9UIF9 1905 aaKnown RBP27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 CPLX1O14810 134 aa27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 ZPR1O75312 459 aa27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 ARHGEF1Q92888 912 aaKnown RBP27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 CFAP45Q9UL16 551 aa27.71■■■□□ 2.03
NPLOC4-217ENST00000574897 CYP7A1P22680 504 aa27.7■■■□□ 2.03
NPLOC4-217ENST00000574897 CKAP2LQ8IYA6 745 aa27.7■■■□□ 2.03
NPLOC4-217ENST00000574897 MYL10Q9BUA6 226 aa27.7■■■□□ 2.03
NPLOC4-217ENST00000574897 TAOK2Q9UL54 1235 aa27.7■■■□□ 2.03
NPLOC4-217ENST00000574897 TIAM2Q8IVF5 1701 aa27.7■■■□□ 2.02
NPLOC4-217ENST00000574897 KDM4AO75164 1064 aa27.7■■■□□ 2.02
NPLOC4-217ENST00000574897 UBE4AQ14139 1066 aa27.7■■■□□ 2.02
NPLOC4-217ENST00000574897 SLC51AQ86UW1 340 aa27.7■■■□□ 2.02
NPLOC4-217ENST00000574897 IGDCC4Q8TDY8 1250 aa27.7■■■□□ 2.02
NPLOC4-217ENST00000574897 TDO2P48775 406 aa27.69■■■□□ 2.02
NPLOC4-217ENST00000574897 AIFM3Q96NN9 605 aa27.69■■■□□ 2.02
NPLOC4-217ENST00000574897 RAI14Q9P0K7 980 aa27.69■■■□□ 2.02
NPLOC4-217ENST00000574897 ZSWIM5Q9P217 1185 aa27.69■■■□□ 2.02
NPLOC4-217ENST00000574897 USP25Q9UHP3 1055 aa27.69■■■□□ 2.02
NPLOC4-217ENST00000574897 RTCBQ9Y3I0 505 aaKnown RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms