RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MB21D2Q8IYB1 491 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 LRRN4CLQ8ND94 238 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 CWC25Q9NXE8 425 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 NWD2Q9ULI1 1742 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 SERPINC1P01008 464 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 ZFYP08048 801 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 SYKP43405 635 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 MYL5Q02045 173 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 WASHC4Q2M389 1173 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 TUBE1Q9UJT0 475 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 FHOD1Q9Y613 1164 aa13.66□□□□□ -0.22
VIPAS39-211ENST00000557658 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 LRRC24Q50LG9 513 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 JMYQ8N9B5 988 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 MYO1BO43795 1136 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 CIAO1O76071 339 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 ISM2Q6H9L7 571 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 TMCO3Q6UWJ1 677 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 HSD3B7Q9H2F3 369 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 ST7Q9NRC1 585 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 MROH7-TTC4A0A0A0MT08 1334 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
VIPAS39-211ENST00000557658 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 WDHD1O75717 1129 aaPredicted RBP13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 FGAP02671 866 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 TPM1P09493 284 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 PNMA6AP0CW24 399 aaPredicted RBP13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 ZC3H6P61129 1189 aaKnown RBP13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 CFAP100Q494V2 611 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 CCDC158Q5M9N0 1113 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 TMX1Q9H3N1 280 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 TRIM65Q6PJ69 517 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 KRT28Q7Z3Y7 464 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
VIPAS39-211ENST00000557658 MEGF6O75095 1541 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 PPP6R2O75170 966 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 URI1O94763 535 aaPredicted RBP13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 ANTXR2P58335 489 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 TTC39AQ5SRH9 613 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 VSTM4Q8IW00 320 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 ZNF594Q96JF6 807 aaPredicted RBP13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 ZNF213O14771 459 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 FOXP2O15409 715 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 DPF2Q92785 391 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 UTP14AQ9BVJ6 771 aaKnown RBP13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 CALCOCO1Q9P1Z2 691 aa13.63□□□□□ -0.23
VIPAS39-211ENST00000557658 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 TADA3O75528 432 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 ZRANB2O95218 330 aaKnown RBP eCLIP13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 CABP4P57796 275 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 REXO1L1PQ8IX06 675 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 APPBP2Q92624 585 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 PODXL2Q9NZ53 605 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 TJP1Q07157 1748 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 CPDO75976 1380 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 FAM237AA0A1B0GTK4 181 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 ARHGAP6O43182 974 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 CDKL5O76039 1030 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 PLA2G4AP47712 749 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 ALG1Q9BT22 464 aa13.62□□□□□ -0.23
VIPAS39-211ENST00000557658 ZMYM6O95789 1325 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 ATP8B1O43520 1251 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 TRDNQ13061 729 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 PNOCQ13519 176 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 SHC4Q6S5L8 630 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 CARD6Q9BX69 1037 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 PUS3Q9BZE2 481 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 NUP188Q5SRE5 1749 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 GOLGA6L9A6NEM1 432 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 CYP27B1O15528 508 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 CYP2C19P33261 490 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms