RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	ACAD11	Q709F0	780 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	BCO2	Q9BYV7	579 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	ZNF576	Q9H609	170 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	TPSG1	Q9NRR2	321 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	NLRP2	Q9NX02	1062 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	CLASP1	Q7Z460	1538 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956		F8W735	103 aa	Predicted RBP	8.83	□□□□□ -1
PSMC6-208	ENST00000554956	SUZ12	Q15022	739 aa	Known RBP	8.83	□□□□□ -1
PSMC6-208	ENST00000554956	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	8.83	□□□□□ -1
PSMC6-208	ENST00000554956	WNT8B	Q93098	351 aa		8.83	□□□□□ -1
PSMC6-208	ENST00000554956	CLEC4M	Q9H2X3	399 aa	Predicted RBP	8.83	□□□□□ -1
PSMC6-208	ENST00000554956	AKTIP	Q9H8T0	292 aa		8.83	□□□□□ -1
PSMC6-208	ENST00000554956	OSGEP	Q9NPF4	335 aa		8.83	□□□□□ -1
PSMC6-208	ENST00000554956	MAGI1	Q96QZ7	1491 aa	Predicted RBP	8.83	□□□□□ -1
PSMC6-208	ENST00000554956	TMEM238L	A0A1B0GVL6	79 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	ITPKA	P23677	461 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	DUOXA2	Q1HG44	320 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	NXPE4	Q6UWF7	544 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	KIAA1211	Q6ZU35	1233 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	DCAF11	Q8TEB1	546 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	MEGF10	Q96KG7	1140 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	SYNJ2	O15056	1496 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	GAPVD1	Q14C86	1478 aa		8.82	□□□□□ -1
PSMC6-208	ENST00000554956	LDHB	P07195	334 aa	Known RBP	8.81	□□□□□ -1
PSMC6-208	ENST00000554956	FURIN	P09958	794 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	ARL4D	P49703	201 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	FCGRT	P55899	365 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	ATP2B2	Q01814	1243 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	GSTM4	Q03013	218 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	CCDC27	Q2M243	656 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	NPAS4	Q8IUM7	802 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	USP26	Q9BXU7	913 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	RNF19A	Q9NV58	838 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	TRAK1	Q9UPV9	953 aa		8.81	□□□□□ -1
PSMC6-208	ENST00000554956	ALG1L	Q6GMV1	187 aa		8.8	□□□□□ -1
PSMC6-208	ENST00000554956	TMEM130	Q8N3G9	435 aa		8.8	□□□□□ -1
PSMC6-208	ENST00000554956	FBF1	Q8TES7	1133 aa		8.8	□□□□□ -1
PSMC6-208	ENST00000554956	SSBP4	Q9BWG4	385 aa	Predicted RBP	8.8	□□□□□ -1
PSMC6-208	ENST00000554956	ABCA10	Q8WWZ4	1543 aa		8.8	□□□□□ -1
PSMC6-208	ENST00000554956	GLB1	P16278	677 aa		8.79	□□□□□ -1
PSMC6-208	ENST00000554956	ZNF157	P51786	506 aa	Predicted RBP	8.79	□□□□□ -1
PSMC6-208	ENST00000554956	FAAP100	Q0VG06	881 aa		8.79	□□□□□ -1
PSMC6-208	ENST00000554956	DTHD1	Q6ZMT9	781 aa		8.79	□□□□□ -1
PSMC6-208	ENST00000554956	OSBPL7	Q9BZF2	842 aa		8.79	□□□□□ -1
PSMC6-208	ENST00000554956	SOX17	Q9H6I2	414 aa	Predicted RBP	8.79	□□□□□ -1
PSMC6-208	ENST00000554956	ZBTB7C	A1YPR0	619 aa		8.78	□□□□□ -1
PSMC6-208	ENST00000554956	B3GALT4	O96024	378 aa		8.78	□□□□□ -1
PSMC6-208	ENST00000554956	NRSN2	Q9GZP1	204 aa		8.78	□□□□□ -1
PSMC6-208	ENST00000554956	WDR97	A6NE52	1622 aa		8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	LOC100289279	A0A1B0GTE1	492 aa		8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	DLGAP3	O95886	979 aa		8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	PTPN12	Q05209	780 aa	Known RBP	8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	EAPP	Q56P03	285 aa	Predicted RBP	8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956		Q6ZS46	218 aa		8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	TP53INP1	Q96A56	240 aa		8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	TRIM56	Q9BRZ2	755 aa	Known RBP	8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	SYNJ1	O43426	1573 aa		8.77	□□□□□ -1.01
PSMC6-208	ENST00000554956	ECEL1	O95672	775 aa		8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	CTSB	P07858	339 aa		8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	RSPO4	Q2I0M5	234 aa	Predicted RBP	8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	C3orf58	Q8NDZ4	430 aa		8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	RUSC1	Q9BVN2	902 aa		8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	AKAP2	Q9Y2D5	859 aa		8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	WRN	Q14191	1432 aa	Predicted RBP eCLIP	8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	ERCC6L2	Q5T890	1561 aa		8.76	□□□□□ -1.01
PSMC6-208	ENST00000554956	PRPF40A	O75400	957 aa	Known RBP	8.75	□□□□□ -1.01
PSMC6-208	ENST00000554956	TAGLN	Q01995	201 aa	Known RBP	8.75	□□□□□ -1.01
PSMC6-208	ENST00000554956	UBL7	Q96S82	380 aa	Predicted RBP	8.75	□□□□□ -1.01
PSMC6-208	ENST00000554956	DUSP9	Q99956	384 aa	Known RBP	8.75	□□□□□ -1.01
PSMC6-208	ENST00000554956	ABCA5	Q8WWZ7	1642 aa		8.75	□□□□□ -1.01
PSMC6-208	ENST00000554956	MAOB	P27338	520 aa		8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	COL19A1	Q14993	1142 aa		8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	NKAPL	Q5M9Q1	402 aa		8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	DZIP1L	Q8IYY4	767 aa	Known RBP	8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	PPP4R2	Q9NY27	417 aa		8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	GPN3	Q9UHW5	284 aa	Predicted RBP	8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	SPG7	Q9UQ90	795 aa		8.74	□□□□□ -1.01
PSMC6-208	ENST00000554956	NUP160	Q12769	1436 aa		8.73	□□□□□ -1.01
PSMC6-208	ENST00000554956	GRIN2A	Q12879	1464 aa		8.73	□□□□□ -1.01
PSMC6-208	ENST00000554956	FBXO24	O75426	580 aa		8.73	□□□□□ -1.01
PSMC6-208	ENST00000554956	FBXO33	Q7Z6M2	555 aa		8.73	□□□□□ -1.01
PSMC6-208	ENST00000554956	RNF208	Q9H0X6	261 aa		8.73	□□□□□ -1.01
PSMC6-208	ENST00000554956	C12orf49	Q9H741	205 aa		8.73	□□□□□ -1.01
PSMC6-208	ENST00000554956	GNA15	P30679	374 aa		8.72	□□□□□ -1.01
PSMC6-208	ENST00000554956	PREP	P48147	710 aa		8.72	□□□□□ -1.01
PSMC6-208	ENST00000554956	TRIM26	Q12899	539 aa	Predicted RBP	8.72	□□□□□ -1.01
PSMC6-208	ENST00000554956	POU4F3	Q15319	338 aa		8.72	□□□□□ -1.01
PSMC6-208	ENST00000554956	TMCO4	Q5TGY1	634 aa		8.72	□□□□□ -1.01
PSMC6-208	ENST00000554956	TMPRSS13	Q9BYE2	586 aa		8.72	□□□□□ -1.01
PSMC6-208	ENST00000554956	CEP170	Q5SW79	1584 aa		8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956		K7ELQ4	463 aa	Predicted RBP	8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956	DYRK3	O43781	588 aa		8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956	USP17L7	P0C7H9	530 aa		8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956	XRCC5	P13010	732 aa	Known RBP	8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956	GSTT1	P30711	240 aa		8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956	SEMA6B	Q9H3T3	888 aa		8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956	PBRM1	Q86U86	1689 aa		8.71	□□□□□ -1.02
PSMC6-208	ENST00000554956	FHAD1	B1AJZ9	1412 aa		8.71	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms