RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 ZFYVE1Q9HBF4 777 aa6.96□□□□□ -1.3
SNHG1-217ENST00000541578 DLGAP3O95886 979 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 FSTP19883 344 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 MAPK8P45983 427 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 POU4F3Q15319 338 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.95□□□□□ -1.32e-12■■□□□ 11.6
SNHG1-217ENST00000541578 PI16Q6UXB8 463 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 C12orf50Q8NA57 414 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-217ENST00000541578 SMG8Q8ND04 991 aaKnown RBP6.95□□□□□ -1.3
SNHG1-217ENST00000541578 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 MYRFLQ96LU7 910 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 BCO2Q9BYV7 579 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 NISCHQ9Y2I1 1504 aa6.95□□□□□ -1.3
SNHG1-217ENST00000541578 MAOBP27338 520 aa6.94□□□□□ -1.3
SNHG1-217ENST00000541578 PREPP48147 710 aa6.94□□□□□ -1.3
SNHG1-217ENST00000541578 DTHD1Q6ZMT9 781 aa6.94□□□□□ -1.3
SNHG1-217ENST00000541578 NRSN2Q9GZP1 204 aa6.94□□□□□ -1.3
SNHG1-217ENST00000541578 SUGCTQ9HAC7 445 aa6.94□□□□□ -1.3
SNHG1-217ENST00000541578 GAS2O43903 313 aaKnown RBP6.93□□□□□ -1.3
SNHG1-217ENST00000541578 BMP3P12645 472 aa6.93□□□□□ -1.3
SNHG1-217ENST00000541578 XRCC5P13010 732 aaKnown RBP6.93□□□□□ -1.3
SNHG1-217ENST00000541578 FCGRTP55899 365 aa6.93□□□□□ -1.3
SNHG1-217ENST00000541578 FMR1Q06787 632 aaKnown RBP eCLIP6.93□□□□□ -1.3
SNHG1-217ENST00000541578 HP1BP3Q5SSJ5 553 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-217ENST00000541578 FAM20CQ8IXL6 584 aa6.93□□□□□ -1.3
SNHG1-217ENST00000541578 FBF1Q8TES7 1133 aa6.93□□□□□ -1.3
SNHG1-217ENST00000541578 CORO1BQ9BR76 489 aa6.93□□□□□ -1.3
SNHG1-217ENST00000541578 GSC2O15499 205 aa6.92□□□□□ -1.3
SNHG1-217ENST00000541578 AP3B2Q13367 1082 aa6.92□□□□□ -1.3
SNHG1-217ENST00000541578 ALG1LQ6GMV1 187 aa6.92□□□□□ -1.3
SNHG1-217ENST00000541578 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
SNHG1-217ENST00000541578 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-217ENST00000541578 CLEC10AQ8IUN9 316 aa6.92□□□□□ -1.3
SNHG1-217ENST00000541578 TRIM56Q9BRZ2 755 aaKnown RBP6.92□□□□□ -1.3
SNHG1-217ENST00000541578 KCNF1Q9H3M0 494 aa6.92□□□□□ -1.3
SNHG1-217ENST00000541578 HIF3AQ9Y2N7 669 aa6.92□□□□□ -1.3
SNHG1-217ENST00000541578 TIAF1O95411 115 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 DRD2P14416 443 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 RBM25P49756 843 aaKnown RBP6.91□□□□□ -1.3
SNHG1-217ENST00000541578 ZNF157P51786 506 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-217ENST00000541578 ATP2B2Q01814 1243 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 BEND4Q6ZU67 534 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNHG1-217ENST00000541578 TRIM42Q8IWZ5 723 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 Q8N3U1 123 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 FAM83CQ9BQN1 747 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 C7orf69Q9H7B7 122 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 RAD18Q9NS91 495 aa6.91□□□□□ -1.3
SNHG1-217ENST00000541578 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 HMX2A2RU54 273 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 IGLV1-40P01703 118 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 USP11P51784 963 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 PPP2R3AQ06190 1150 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 SOX4Q06945 474 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-217ENST00000541578 FAAP100Q0VG06 881 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 TMEM39AQ9NV64 488 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 WWC3Q9ULE0 1092 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 AKAP2Q9Y2D5 859 aa6.9□□□□□ -1.3
SNHG1-217ENST00000541578 GIPC1O14908 333 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 CTSBP07858 339 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 MAP4P27816 1152 aaKnown RBP6.89□□□□□ -1.31
SNHG1-217ENST00000541578 RXRBP28702 533 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 RNF43Q68DV7 783 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 RGS22Q8NE09 1264 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 SETDB2Q96T68 719 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 SRCIN1Q9C0H9 1055 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-217ENST00000541578 RNF112Q9ULX5 631 aa6.89□□□□□ -1.31
SNHG1-217ENST00000541578 ECEL1O95672 775 aa6.88□□□□□ -1.31
SNHG1-217ENST00000541578 P4HBP07237 508 aaKnown RBP6.88□□□□□ -1.31
SNHG1-217ENST00000541578 NFIAQ12857 509 aa6.88□□□□□ -1.31
SNHG1-217ENST00000541578 PDE3AQ14432 1141 aa6.88□□□□□ -1.31
SNHG1-217ENST00000541578 SGO2Q562F6 1265 aa6.88□□□□□ -1.31
SNHG1-217ENST00000541578 AKAP4Q5JQC9 854 aa6.88□□□□□ -1.31
SNHG1-217ENST00000541578 C2CD4AQ8NCU7 369 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-217ENST00000541578 LDHBP07195 334 aaKnown RBP6.87□□□□□ -1.31
SNHG1-217ENST00000541578 ADH5P11766 374 aa6.87□□□□□ -1.31
SNHG1-217ENST00000541578 GSTT1P30711 240 aa6.87□□□□□ -1.31
SNHG1-217ENST00000541578 ARTNQ5T4W7 220 aa6.87□□□□□ -1.31
SNHG1-217ENST00000541578 DBNDD2Q9BQY9 259 aa6.87□□□□□ -1.31
SNHG1-217ENST00000541578 OSBPL7Q9BZF2 842 aa6.87□□□□□ -1.31
SNHG1-217ENST00000541578 SPG7Q9UQ90 795 aa6.87□□□□□ -1.31
SNHG1-217ENST00000541578 AOC2O75106 756 aa6.86□□□□□ -1.31
SNHG1-217ENST00000541578 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
SNHG1-217ENST00000541578 DYMQ7RTS9 669 aa6.86□□□□□ -1.31
SNHG1-217ENST00000541578 C3orf58Q8NDZ4 430 aa6.86□□□□□ -1.31
SNHG1-217ENST00000541578 FBLIM1Q8WUP2 373 aa6.86□□□□□ -1.31
SNHG1-217ENST00000541578 YIPF2Q9BWQ6 316 aa6.86□□□□□ -1.31
SNHG1-217ENST00000541578 ZC3H12CQ9C0D7 883 aaKnown RBP6.86□□□□□ -1.31
SNHG1-217ENST00000541578 SYNGAP1Q96PV0 1343 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 FAM95CA0A1B0GW59 222 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 ANKRD33BA6NCL7 494 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 GSTP1P09211 210 aaKnown RBP6.85□□□□□ -1.31
SNHG1-217ENST00000541578 SLFN14P0C7P3 912 aa6.85□□□□□ -1.31
SNHG1-217ENST00000541578 HNRNPUQ00839 825 aaKnown RBP eCLIP6.85□□□□□ -1.31
SNHG1-217ENST00000541578 LRP8Q14114 963 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms