RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 ADRA2BP18089 450 aa16.27■□□□□ 0.19
COLCA1-204ENST00000540738 UBE4AQ14139 1066 aa16.27■□□□□ 0.19
COLCA1-204ENST00000540738 PNMA2Q9UL42 364 aa16.27■□□□□ 0.19
COLCA1-204ENST00000540738 DKC1O60832 514 aaKnown RBP eCLIP16.26■□□□□ 0.19
COLCA1-204ENST00000540738 KIF4AO95239 1232 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 TCP10Q12799 353 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 ECM2O94769 699 aaPredicted RBP16.26■□□□□ 0.19
COLCA1-204ENST00000540738 KRT2P35908 639 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 SLC1A4P43007 532 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 KBTBD3Q8NAB2 608 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 LARP6Q9BRS8 491 aaKnown RBP16.26■□□□□ 0.19
COLCA1-204ENST00000540738 GTPBP4Q9BZE4 634 aaKnown RBP16.26■□□□□ 0.19
COLCA1-204ENST00000540738 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
COLCA1-204ENST00000540738 CREB3L3Q68CJ9 461 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 TCHPQ9BT92 498 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 SPA17Q15506 151 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 KCNG4Q8TDN1 519 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 HSP90B2PQ58FF3 399 aa16.26■□□□□ 0.19
COLCA1-204ENST00000540738 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.26■□□□□ 0.19
COLCA1-204ENST00000540738 GPAA1O43292 621 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 RPS6KA4O75676 772 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 ARPP21Q9UBL0 812 aaPredicted RBP16.25■□□□□ 0.19
COLCA1-204ENST00000540738 KIAA1328Q86T90 577 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 SMC5Q8IY18 1101 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 NPR1P16066 1061 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 STAT6P42226 847 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 LZTS2Q9BRK4 669 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 GPCPD1Q9NPB8 672 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 ZNF804BA4D1E1 1349 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 MAPKAPK5Q8IW41 473 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 TTLL6Q8N841 843 aa16.25■□□□□ 0.19
COLCA1-204ENST00000540738 SEMA3EO15041 775 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
COLCA1-204ENST00000540738 PIGBQ92521 554 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 KRT13P13646 458 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 IQCEQ6IPM2 695 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 RLBP1P12271 317 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 DOK7Q18PE1 504 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
COLCA1-204ENST00000540738 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
COLCA1-204ENST00000540738 CAMK4Q16566 473 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 TGFBRAP1Q8WUH2 860 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 HEG1Q9ULI3 1381 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 MMP10P09238 476 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 MCM4P33991 863 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 SUPT20HL1Q3ZLR7 823 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 KIAA0825Q8IV33 1275 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 SPC24Q8NBT2 197 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 HSPA1LP34931 641 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 CHRNDQ07001 517 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 CCDC172P0C7W6 258 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 TCEANC2Q96MN5 208 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 IMPG2Q9BZV3 1241 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 IQGAP3Q86VI3 1631 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 ANKRD62A6NC57 917 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 CHMLP26374 656 aa16.23■□□□□ 0.19
COLCA1-204ENST00000540738 PHACTR2O75167 634 aa16.22■□□□□ 0.19
COLCA1-204ENST00000540738 PLEKHM2Q8IWE5 1019 aa16.22■□□□□ 0.19
COLCA1-204ENST00000540738 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
COLCA1-204ENST00000540738 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
COLCA1-204ENST00000540738 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
COLCA1-204ENST00000540738 ZAP70P43403 619 aa16.21■□□□□ 0.19
COLCA1-204ENST00000540738 ZNF532Q9HCE3 1301 aa16.21■□□□□ 0.19
COLCA1-204ENST00000540738 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
COLCA1-204ENST00000540738 ARHGAP29Q52LW3 1261 aa16.21■□□□□ 0.19
COLCA1-204ENST00000540738 TMX3Q96JJ7 454 aa16.21■□□□□ 0.19
COLCA1-204ENST00000540738 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
COLCA1-204ENST00000540738 FAM13AO94988 1023 aa16.21■□□□□ 0.19
COLCA1-204ENST00000540738 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
COLCA1-204ENST00000540738 ATP5JP18859 108 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 ARID3AQ99856 593 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 SYKP43405 635 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 VPS72Q15906 364 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 PTPDC1A2A3K4 754 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 B4E1Z4 1266 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 PPFIA3O75145 1194 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 PTPRMP28827 1452 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 USP8P40818 1118 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 GYG1P46976 350 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 ARMC9Q7Z3E5 817 aa16.2■□□□□ 0.18
COLCA1-204ENST00000540738 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
COLCA1-204ENST00000540738 HS2ST1Q7LGA3 356 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 FILIP1Q7Z7B0 1213 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 FCHSD1Q86WN1 690 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 NSMFQ6X4W1 530 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 ZKSCAN3Q9BRR0 538 aa16.19■□□□□ 0.18
COLCA1-204ENST00000540738 AGLP35573 1532 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms