RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CEP126Q9P2H0 1117 aa11.22□□□□□ -0.61
CDH13-204ENST00000539548 FGAP02671 866 aa11.21□□□□□ -0.61
CDH13-204ENST00000539548 CCDC158Q5M9N0 1113 aa11.21□□□□□ -0.61
CDH13-204ENST00000539548 TMC6Q7Z403 805 aa11.21□□□□□ -0.61
CDH13-204ENST00000539548 PPP1R13BQ96KQ4 1090 aa11.21□□□□□ -0.61
CDH13-204ENST00000539548 FBXO3Q9UK99 471 aa11.21□□□□□ -0.61
CDH13-204ENST00000539548 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.61
CDH13-204ENST00000539548 C4AP0C0L4 1744 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 C4BP0C0L5 1744 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 NRDCO43847 1150 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 SMC2O95347 1197 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 SFPQP23246 707 aaKnown RBP eCLIP11.21□□□□□ -0.62
CDH13-204ENST00000539548 ANTXR2P58335 489 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 KIF23Q02241 960 aaPredicted RBP11.21□□□□□ -0.62
CDH13-204ENST00000539548 SLC39A14Q15043 492 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 CCDC93Q567U6 631 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 NCOA7Q8NI08 942 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 PUS3Q9BZE2 481 aaKnown RBP11.21□□□□□ -0.62
CDH13-204ENST00000539548 AKAP2Q9Y2D5 859 aa11.21□□□□□ -0.62
CDH13-204ENST00000539548 GOLGA8BA8MQT2 603 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 PFKFB1P16118 471 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 FKBP4Q02790 459 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDH13-204ENST00000539548 TTC39AQ5SRH9 613 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 KRT222Q8N1A0 295 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 TUBE1Q9UJT0 475 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 MYH7P12883 1935 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 ABCC12Q96J65 1359 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 KIF28PB7ZC32 967 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 CPLX1O14810 134 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 CCP110O43303 1012 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 SLFN14P0C7P3 912 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 HAND2P61296 217 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 FANCCQ00597 558 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 ELF2Q15723 593 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 WASHC4Q2M389 1173 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 FBXO38Q6PIJ6 1188 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
CDH13-204ENST00000539548 APPBP2Q92624 585 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 XAGE2Q96GT9 111 aa11.2□□□□□ -0.62
CDH13-204ENST00000539548 UBR2Q8IWV8 1755 aa11.19□□□□□ -0.62
CDH13-204ENST00000539548 FAM237AA0A1B0GTK4 181 aa11.19□□□□□ -0.62
CDH13-204ENST00000539548 BIN1O00499 593 aa11.19□□□□□ -0.62
CDH13-204ENST00000539548 GORABQ5T7V8 394 aa11.19□□□□□ -0.62
CDH13-204ENST00000539548 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
CDH13-204ENST00000539548 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
CDH13-204ENST00000539548 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDH13-204ENST00000539548 V9GYY5 206 aaPredicted RBP11.19□□□□□ -0.62
CDH13-204ENST00000539548 CPDO75976 1380 aa11.19□□□□□ -0.62
CDH13-204ENST00000539548 ZNF213O14771 459 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 PPP6R2O75170 966 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 WDHD1O75717 1129 aaPredicted RBP11.18□□□□□ -0.62
CDH13-204ENST00000539548 SYT10Q6XYQ8 523 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 HSD3B7Q9H2F3 369 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 HPSEQ9Y251 543 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 ZNF335Q9H4Z2 1342 aaPredicted RBP11.18□□□□□ -0.62
CDH13-204ENST00000539548 CBFA2T2O43439 604 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 MYO1BO43795 1136 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 IGSF3O75054 1194 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 A1BGP04217 495 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 H2AFXP16104 143 aaPredicted RBP11.18□□□□□ -0.62
CDH13-204ENST00000539548 ADORA1P30542 326 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 FAM193AP78312 1265 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 CCDC57Q2TAC2 916 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 ZNF771Q7L3S4 317 aaPredicted RBP11.18□□□□□ -0.62
CDH13-204ENST00000539548 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
CDH13-204ENST00000539548 PUS7LQ9H0K6 701 aaKnown RBP11.18□□□□□ -0.62
CDH13-204ENST00000539548 GJB4Q9NTQ9 266 aa11.18□□□□□ -0.62
CDH13-204ENST00000539548 ERVV-2B6SEH9 535 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 LMOD1P29536 600 aaPredicted RBP11.17□□□□□ -0.62
CDH13-204ENST00000539548 SYKP43405 635 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 ETF1P62495 437 aaKnown RBP11.17□□□□□ -0.62
CDH13-204ENST00000539548 TERF2Q15554 542 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 JMYQ8N9B5 988 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 ISCA1Q9BUE6 129 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 TMX1Q9H3N1 280 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 ZBTB3Q9H5J0 574 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDH13-204ENST00000539548 MROH7-TTC4A0A0A0MT08 1334 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 ZMYM6O95789 1325 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 ZAP70P43403 619 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 SCARF1Q14162 830 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 PTPAQ15257 358 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 TAF3Q5VWG9 929 aa11.17□□□□□ -0.62
CDH13-204ENST00000539548 PHLPP2Q6ZVD8 1323 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 GPAA1O43292 621 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 CDKL5O76039 1030 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 MARCKSP29966 332 aaPredicted RBP11.16□□□□□ -0.62
CDH13-204ENST00000539548 MYL5Q02045 173 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 TRIM28Q13263 835 aaKnown RBP11.16□□□□□ -0.62
CDH13-204ENST00000539548 BMS1Q14692 1282 aaKnown RBP11.16□□□□□ -0.62
CDH13-204ENST00000539548 ERCC6LQ2NKX8 1250 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 SHC4Q6S5L8 630 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 ALG1Q9BT22 464 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 ZNF446Q9NWS9 450 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 ANGEL1Q9UNK9 670 aaKnown RBP11.16□□□□□ -0.62
CDH13-204ENST00000539548 KCPQ6ZWJ8 1503 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 UBAP1LF5GYI3 381 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 ATP1A3P13637 1013 aa11.16□□□□□ -0.62
CDH13-204ENST00000539548 UBASH3AP57075 661 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms