RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 USP26Q9BXU7 913 aa8.66□□□□□ -1.02
SSPN-206ENST00000539019 SOGA1O94964 1423 aa8.65□□□□□ -1.02
SSPN-206ENST00000539019 GPR182O15218 404 aa8.65□□□□□ -1.02
SSPN-206ENST00000539019 HYAL3O43820 417 aaPredicted RBP8.65□□□□□ -1.02
SSPN-206ENST00000539019 PREPP48147 710 aa8.65□□□□□ -1.02
SSPN-206ENST00000539019 GSTM4Q03013 218 aa8.65□□□□□ -1.02
SSPN-206ENST00000539019 ZNF423Q2M1K9 1284 aa8.65□□□□□ -1.02
SSPN-206ENST00000539019 BIVM-ERCC5R4GMW8 1640 aa8.65□□□□□ -1.02
SSPN-206ENST00000539019 LOC100289279A0A1B0GTE1 492 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 DLGAP3O95886 979 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 IGLV1-40P01703 118 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 PCDH1Q08174 1060 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 LRP8Q14114 963 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 FAM20CQ8IXL6 584 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 CLEC4MQ9H2X3 399 aaPredicted RBP8.64□□□□□ -1.03
SSPN-206ENST00000539019 NPHS2Q9NP85 383 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
SSPN-206ENST00000539019 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
SSPN-206ENST00000539019 EIF1AYO14602 144 aaKnown RBP8.63□□□□□ -1.03
SSPN-206ENST00000539019 BRD1O95696 1058 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 BMP3P12645 472 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 NUTM2GQ5VZR2 741 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 FDX2Q6P4F2 183 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 TRIM42Q8IWZ5 723 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 CCDC74AQ96AQ1 378 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 TMPRSS13Q9BYE2 586 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 RBCK1Q9BYM8 510 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 EHD4Q9H223 541 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 C7orf69Q9H7B7 122 aa8.63□□□□□ -1.03
SSPN-206ENST00000539019 HMX2A2RU54 273 aa8.62□□□□□ -1.03
SSPN-206ENST00000539019 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.62□□□□□ -1.03
SSPN-206ENST00000539019 CLEC10AQ8IUN9 316 aa8.62□□□□□ -1.03
SSPN-206ENST00000539019 DNAJC25Q9H1X3 360 aa8.62□□□□□ -1.03
SSPN-206ENST00000539019 AQRO60306 1485 aaKnown RBP eCLIP8.62□□□□□ -1.03
SSPN-206ENST00000539019 TDRD9Q8NDG6 1382 aaKnown RBP8.62□□□□□ -1.03
SSPN-206ENST00000539019 GSC2O15499 205 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 EXOSC6Q5RKV6 272 aaKnown RBP8.61□□□□□ -1.03
SSPN-206ENST00000539019 C12orf50Q8NA57 414 aaPredicted RBP8.61□□□□□ -1.03
SSPN-206ENST00000539019 DMRTB1Q96MA1 342 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 FAM83CQ9BQN1 747 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 BIN2Q9UBW5 565 aaPredicted RBP8.61□□□□□ -1.03
SSPN-206ENST00000539019 NFIAQ12857 509 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 BEND4Q6ZU67 534 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 SMG8Q8ND04 991 aaKnown RBP8.61□□□□□ -1.03
SSPN-206ENST00000539019 CSRNP1Q96S65 589 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 CYP4F12Q9HCS2 524 aa8.61□□□□□ -1.03
SSPN-206ENST00000539019 DRD2P14416 443 aa8.6□□□□□ -1.03
SSPN-206ENST00000539019 RNF43Q68DV7 783 aa8.6□□□□□ -1.03
SSPN-206ENST00000539019 ALKBH8Q96BT7 664 aaKnown RBP8.6□□□□□ -1.03
SSPN-206ENST00000539019 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
SSPN-206ENST00000539019 SUGCTQ9HAC7 445 aa8.6□□□□□ -1.03
SSPN-206ENST00000539019 GAS2O43903 313 aaKnown RBP8.59□□□□□ -1.03
SSPN-206ENST00000539019 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
SSPN-206ENST00000539019 GADD45BO75293 160 aaPredicted RBP8.59□□□□□ -1.03
SSPN-206ENST00000539019 TIAF1O95411 115 aa8.59□□□□□ -1.03
SSPN-206ENST00000539019 ITPKAP23677 461 aa8.59□□□□□ -1.03
SSPN-206ENST00000539019 TMC7Q7Z402 723 aa8.59□□□□□ -1.03
SSPN-206ENST00000539019 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
SSPN-206ENST00000539019 EPS8L3Q8TE67 593 aaKnown RBP8.59□□□□□ -1.03
SSPN-206ENST00000539019 HIF3AQ9Y2N7 669 aa8.59□□□□□ -1.03
SSPN-206ENST00000539019 WDR97A6NE52 1622 aa8.59□□□□□ -1.04
SSPN-206ENST00000539019 CTSBP07858 339 aa8.58□□□□□ -1.04
SSPN-206ENST00000539019 MAOBP27338 520 aa8.58□□□□□ -1.04
SSPN-206ENST00000539019 SSTR4P31391 388 aa8.58□□□□□ -1.04
SSPN-206ENST00000539019 SGO2Q562F6 1265 aa8.58□□□□□ -1.04
SSPN-206ENST00000539019 DCTN4Q9UJW0 460 aa8.58□□□□□ -1.04
SSPN-206ENST00000539019 B3GALT4O96024 378 aa8.57□□□□□ -1.04
SSPN-206ENST00000539019 TGFB1P01137 390 aa8.57□□□□□ -1.04
SSPN-206ENST00000539019 CYP11A1P05108 521 aa8.57□□□□□ -1.04
SSPN-206ENST00000539019 MAP4P27816 1152 aaKnown RBP8.57□□□□□ -1.04
SSPN-206ENST00000539019 POU4F3Q15319 338 aa8.57□□□□□ -1.04
SSPN-206ENST00000539019 ZDHHC13Q8IUH4 622 aa8.57□□□□□ -1.04
SSPN-206ENST00000539019 DBNDD2Q9BQY9 259 aa8.57□□□□□ -1.04
SSPN-206ENST00000539019 ABCB6Q9NP58 842 aa8.57□□□□□ -1.04
SSPN-206ENST00000539019 ABCA5Q8WWZ7 1642 aa8.56□□□□□ -1.04
SSPN-206ENST00000539019 RUSC2Q8N2Y8 1516 aa8.56□□□□□ -1.04
SSPN-206ENST00000539019 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
SSPN-206ENST00000539019 MED26O95402 600 aa8.56□□□□□ -1.04
SSPN-206ENST00000539019 PTPN12Q05209 780 aaKnown RBP8.56□□□□□ -1.04
SSPN-206ENST00000539019 SOX4Q06945 474 aaPredicted RBP8.56□□□□□ -1.04
SSPN-206ENST00000539019 PRPF40BQ6NWY9 871 aaKnown RBP8.56□□□□□ -1.04
SSPN-206ENST00000539019 GLIS3Q8NEA6 775 aa8.56□□□□□ -1.04
SSPN-206ENST00000539019 TRIM56Q9BRZ2 755 aaKnown RBP8.56□□□□□ -1.04
SSPN-206ENST00000539019 EIF4G3O43432 1585 aaKnown RBP8.55□□□□□ -1.04
SSPN-206ENST00000539019 ECEL1O95672 775 aa8.55□□□□□ -1.04
SSPN-206ENST00000539019 RXRBP28702 533 aa8.55□□□□□ -1.04
SSPN-206ENST00000539019 GRM2Q14416 872 aa8.55□□□□□ -1.04
SSPN-206ENST00000539019 DSC3Q14574 896 aa8.55□□□□□ -1.04
SSPN-206ENST00000539019 PCMTD2Q9NV79 361 aa8.55□□□□□ -1.04
SSPN-206ENST00000539019 GAPVD1Q14C86 1478 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 PRR19A6NJB7 356 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 MAPK1P28482 360 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 CD97P48960 835 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 USP11P51784 963 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 CDPF1Q6NVV7 123 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
SSPN-206ENST00000539019 C2CD4AQ8NCU7 369 aaPredicted RBP8.54□□□□□ -1.04
SSPN-206ENST00000539019 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms