RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 DCAF11Q8TEB1 546 aa9.51□□□□□ -0.89
CLIP1-207ENST00000536634 TPSG1Q9NRR2 321 aa9.51□□□□□ -0.89
CLIP1-207ENST00000536634 CCDC88BA6NC98 1476 aa9.51□□□□□ -0.89
CLIP1-207ENST00000536634 KRTAP9-6A0A140TA67 174 aa9.5□□□□□ -0.89
CLIP1-207ENST00000536634 ANKRD33BA6NCL7 494 aa9.5□□□□□ -0.89
CLIP1-207ENST00000536634 PCDH1Q08174 1060 aa9.5□□□□□ -0.89
CLIP1-207ENST00000536634 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.5□□□□□ -0.89
CLIP1-207ENST00000536634 ZNF576Q9H609 170 aa9.5□□□□□ -0.89
CLIP1-207ENST00000536634 AKTIPQ9H8T0 292 aa9.5□□□□□ -0.89
CLIP1-207ENST00000536634 NLRP2Q9NX02 1062 aa9.5□□□□□ -0.89
CLIP1-207ENST00000536634 CLASP1Q7Z460 1538 aa9.5□□□□□ -0.89
CLIP1-207ENST00000536634 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
CLIP1-207ENST00000536634 ITPKAP23677 461 aa9.49□□□□□ -0.89
CLIP1-207ENST00000536634 DNAJC14Q6Y2X3 702 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-207ENST00000536634 ACAD11Q709F0 780 aa9.49□□□□□ -0.89
CLIP1-207ENST00000536634 TMEM130Q8N3G9 435 aa9.49□□□□□ -0.89
CLIP1-207ENST00000536634 MEGF10Q96KG7 1140 aa9.49□□□□□ -0.89
CLIP1-207ENST00000536634 BCO2Q9BYV7 579 aa9.49□□□□□ -0.89
CLIP1-207ENST00000536634 CLEC4MQ9H2X3 399 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-207ENST00000536634 FURINP09958 794 aa9.48□□□□□ -0.89
CLIP1-207ENST00000536634 DUOXA2Q1HG44 320 aa9.48□□□□□ -0.89
CLIP1-207ENST00000536634 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
CLIP1-207ENST00000536634 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-207ENST00000536634 TRAK1Q9UPV9 953 aa9.48□□□□□ -0.89
CLIP1-207ENST00000536634 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-207ENST00000536634 ABCC8Q09428 1581 aa9.47□□□□□ -0.89
CLIP1-207ENST00000536634 ARL4DP49703 201 aa9.47□□□□□ -0.89
CLIP1-207ENST00000536634 NXPE4Q6UWF7 544 aa9.47□□□□□ -0.89
CLIP1-207ENST00000536634 SOX17Q9H6I2 414 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-207ENST00000536634 FCGRTP55899 365 aa9.46□□□□□ -0.9
CLIP1-207ENST00000536634 GSTM4Q03013 218 aa9.46□□□□□ -0.9
CLIP1-207ENST00000536634 Q6ZS46 218 aa9.46□□□□□ -0.9
CLIP1-207ENST00000536634 FBF1Q8TES7 1133 aa9.46□□□□□ -0.9
CLIP1-207ENST00000536634 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.9
CLIP1-207ENST00000536634 RAD54L2Q9Y4B4 1467 aa9.46□□□□□ -0.9
CLIP1-207ENST00000536634 B3GALT4O96024 378 aa9.45□□□□□ -0.9
CLIP1-207ENST00000536634 LDHBP07195 334 aaKnown RBP9.45□□□□□ -0.9
CLIP1-207ENST00000536634 PTPN12Q05209 780 aaKnown RBP9.45□□□□□ -0.9
CLIP1-207ENST00000536634 FAAP100Q0VG06 881 aa9.45□□□□□ -0.9
CLIP1-207ENST00000536634 RSPO4Q2I0M5 234 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-207ENST00000536634 ALG1LQ6GMV1 187 aa9.45□□□□□ -0.9
CLIP1-207ENST00000536634 NPAS4Q8IUM7 802 aa9.45□□□□□ -0.9
CLIP1-207ENST00000536634 OSBPL7Q9BZF2 842 aa9.45□□□□□ -0.9
CLIP1-207ENST00000536634 NRSN2Q9GZP1 204 aa9.45□□□□□ -0.9
CLIP1-207ENST00000536634 DLGAP3O95886 979 aa9.44□□□□□ -0.9
CLIP1-207ENST00000536634 ATP2B2Q01814 1243 aa9.44□□□□□ -0.9
CLIP1-207ENST00000536634 NKAPLQ5M9Q1 402 aa9.44□□□□□ -0.9
CLIP1-207ENST00000536634 DZIP1LQ8IYY4 767 aaKnown RBP9.44□□□□□ -0.9
CLIP1-207ENST00000536634 TP53INP1Q96A56 240 aa9.44□□□□□ -0.9
CLIP1-207ENST00000536634 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
CLIP1-207ENST00000536634 RNF19AQ9NV58 838 aa9.44□□□□□ -0.9
CLIP1-207ENST00000536634 TDRD9Q8NDG6 1382 aaKnown RBP9.43□□□□□ -0.9
CLIP1-207ENST00000536634 LOC100289279A0A1B0GTE1 492 aa9.43□□□□□ -0.9
CLIP1-207ENST00000536634 GLB1P16278 677 aa9.43□□□□□ -0.9
CLIP1-207ENST00000536634 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
CLIP1-207ENST00000536634 DTHD1Q6ZMT9 781 aa9.43□□□□□ -0.9
CLIP1-207ENST00000536634 TRIM56Q9BRZ2 755 aaKnown RBP9.43□□□□□ -0.9
CLIP1-207ENST00000536634 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
CLIP1-207ENST00000536634 ZNF157P51786 506 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-207ENST00000536634 UBL7Q96S82 380 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-207ENST00000536634 ECEL1O95672 775 aa9.41□□□□□ -0.9
CLIP1-207ENST00000536634 CTSBP07858 339 aa9.41□□□□□ -0.9
CLIP1-207ENST00000536634 COL19A1Q14993 1142 aa9.41□□□□□ -0.9
CLIP1-207ENST00000536634 RPS26P11Q5JNZ5 115 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-207ENST00000536634 C3orf58Q8NDZ4 430 aa9.41□□□□□ -0.9
CLIP1-207ENST00000536634 RUSC1Q9BVN2 902 aa9.41□□□□□ -0.9
CLIP1-207ENST00000536634 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-207ENST00000536634 Q8N3U1 123 aa9.4□□□□□ -0.9
CLIP1-207ENST00000536634 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
CLIP1-207ENST00000536634 AKAP2Q9Y2D5 859 aa9.4□□□□□ -0.9
CLIP1-207ENST00000536634 GAPVD1Q14C86 1478 aa9.4□□□□□ -0.91
CLIP1-207ENST00000536634 SOGA1O94964 1423 aa9.39□□□□□ -0.91
CLIP1-207ENST00000536634 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-207ENST00000536634 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
CLIP1-207ENST00000536634 ITGB7P26010 798 aa9.39□□□□□ -0.91
CLIP1-207ENST00000536634 MAOBP27338 520 aa9.39□□□□□ -0.91
CLIP1-207ENST00000536634 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
CLIP1-207ENST00000536634 RNF208Q9H0X6 261 aa9.39□□□□□ -0.91
CLIP1-207ENST00000536634 SEMA6BQ9H3T3 888 aa9.39□□□□□ -0.91
CLIP1-207ENST00000536634 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
CLIP1-207ENST00000536634 ZBTB7CA1YPR0 619 aa9.38□□□□□ -0.91
CLIP1-207ENST00000536634 DYRK3O43781 588 aa9.38□□□□□ -0.91
CLIP1-207ENST00000536634 DUSP9Q99956 384 aaKnown RBP9.38□□□□□ -0.91
CLIP1-207ENST00000536634 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
CLIP1-207ENST00000536634 C12orf49Q9H741 205 aa9.38□□□□□ -0.91
CLIP1-207ENST00000536634 MAGI1Q96QZ7 1491 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-207ENST00000536634 WDR97A6NE52 1622 aa9.38□□□□□ -0.91
CLIP1-207ENST00000536634 MEGF11A6BM72 1044 aa9.37□□□□□ -0.91
CLIP1-207ENST00000536634 XRCC5P13010 732 aaKnown RBP9.37□□□□□ -0.91
CLIP1-207ENST00000536634 TAGLNQ01995 201 aaKnown RBP9.37□□□□□ -0.91
CLIP1-207ENST00000536634 POU4F3Q15319 338 aa9.37□□□□□ -0.91
CLIP1-207ENST00000536634 FBXO33Q7Z6M2 555 aa9.37□□□□□ -0.91
CLIP1-207ENST00000536634 ARMC10Q8N2F6 343 aa9.37□□□□□ -0.91
CLIP1-207ENST00000536634 FAM46AQ96IP4 442 aaKnown RBP9.37□□□□□ -0.91
CLIP1-207ENST00000536634 CEP41Q9BYV8 373 aa9.37□□□□□ -0.91
CLIP1-207ENST00000536634 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
CLIP1-207ENST00000536634 SYNJ2O15056 1496 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 FGD5Q6ZNL6 1462 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 CYP11A1P05108 521 aa9.36□□□□□ -0.91
CLIP1-207ENST00000536634 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms