RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 CRNKL1Q9BZJ0 848 aaKnown RBP12.9□□□□□ -0.34
BRPF3-209ENST00000532330 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
BRPF3-209ENST00000532330 MYH7P12883 1935 aa12.9□□□□□ -0.34
BRPF3-209ENST00000532330 CALM1P0DP23 149 aa12.9□□□□□ -0.34
BRPF3-209ENST00000532330 CALM2P0DP24 149 aa12.9□□□□□ -0.34
BRPF3-209ENST00000532330 CALM3P0DP25 149 aa12.9□□□□□ -0.34
BRPF3-209ENST00000532330 DDX60Q8IY21 1712 aaKnown RBP12.9□□□□□ -0.34
BRPF3-209ENST00000532330 CCDC69A6NI79 296 aa12.9□□□□□ -0.34
BRPF3-209ENST00000532330 LIFRP42702 1097 aa12.9□□□□□ -0.34
BRPF3-209ENST00000532330 RASGRF1Q13972 1273 aa12.9□□□□□ -0.34
BRPF3-209ENST00000532330 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
BRPF3-209ENST00000532330 XBP1P17861 261 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 GRAPQ13588 217 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 USP48Q86UV5 1035 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-209ENST00000532330 GRAPLQ8TC17 118 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-209ENST00000532330 BRIP1Q9BX63 1249 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 COL24A1Q17RW2 1714 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 BBOX1O75936 387 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 CYP7A1P22680 504 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 NASPP49321 788 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-209ENST00000532330 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 NFXL1Q6ZNB6 911 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 ESR2Q92731 530 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 SEC31BQ9NQW1 1179 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 TRIM22Q8IYM9 498 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 SYNE4Q8N205 404 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 JMYQ8N9B5 988 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 XDHP47989 1333 aa12.89□□□□□ -0.35
BRPF3-209ENST00000532330 MBD4O95243 580 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 PLCG2P16885 1265 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 SAFBQ15424 915 aaKnown RBP eCLIP12.88□□□□□ -0.35
BRPF3-209ENST00000532330 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 NECAB1Q8N987 351 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 BAG3O95817 575 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 CPA1P15085 419 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 AKNAD1Q5T1N1 836 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 FBXO33Q7Z6M2 555 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
BRPF3-209ENST00000532330 PUS7LQ9H0K6 701 aaKnown RBP12.88□□□□□ -0.35
BRPF3-209ENST00000532330 LY75O60449 1722 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 GOLGA8BA8MQT2 603 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 PDIA3P30101 505 aaKnown RBP12.88□□□□□ -0.35
BRPF3-209ENST00000532330 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
BRPF3-209ENST00000532330 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 TCRBV5S4A2TA0A5A2 114 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
BRPF3-209ENST00000532330 STK36Q9NRP7 1315 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 KLF18A0A0U1RQI7 1052 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 SCARF1Q14162 830 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 FOXD4L5Q5VV16 416 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-209ENST00000532330 HELBQ8NG08 1087 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-209ENST00000532330 FOXD4L4Q8WXT5 416 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-209ENST00000532330 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 NDUFB9Q9Y6M9 179 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 STK3Q13188 491 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 ATP8A2Q9NTI2 1148 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 HSPA1LP34931 641 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 METAP2P50579 478 aaKnown RBP eCLIP12.87□□□□□ -0.359e-6■■■■□ 23.9
BRPF3-209ENST00000532330 C8orf76Q96K31 380 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
BRPF3-209ENST00000532330 ZBTB43O43298 467 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
BRPF3-209ENST00000532330 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
BRPF3-209ENST00000532330 PKP1Q13835 747 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 NLGN1Q8N2Q7 840 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
BRPF3-209ENST00000532330 C4BP0C0L5 1744 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 LARGE1O95461 756 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 GNL2Q13823 731 aaKnown RBP12.86□□□□□ -0.35
BRPF3-209ENST00000532330 TMEM67Q5HYA8 995 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 RBM28Q9NW13 759 aaKnown RBP12.86□□□□□ -0.35
BRPF3-209ENST00000532330 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
BRPF3-209ENST00000532330 TPM3P06753 285 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 SCRN1Q12765 414 aa12.86□□□□□ -0.35
BRPF3-209ENST00000532330 FIBPO43427 364 aa12.85□□□□□ -0.35
BRPF3-209ENST00000532330 CCDC192P0DO97 292 aa12.85□□□□□ -0.35
BRPF3-209ENST00000532330 BCAMP50895 628 aa12.85□□□□□ -0.35
BRPF3-209ENST00000532330 STOX1Q6ZVD7 989 aa12.85□□□□□ -0.35
BRPF3-209ENST00000532330 FAM177A1Q8N128 213 aaPredicted RBP12.85□□□□□ -0.35
BRPF3-209ENST00000532330 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
BRPF3-209ENST00000532330 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
BRPF3-209ENST00000532330 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms