RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP47-209ENST00000530041 PI16Q6UXB8 463 aa8.61□□□□□ -1.03
USP47-209ENST00000530041 FAM20CQ8IXL6 584 aa8.61□□□□□ -1.03
USP47-209ENST00000530041 Q8N3U1 123 aa8.61□□□□□ -1.03
USP47-209ENST00000530041 PPP4R2Q9NY27 417 aa8.61□□□□□ -1.03
USP47-209ENST00000530041 HIF3AQ9Y2N7 669 aa8.61□□□□□ -1.03
USP47-209ENST00000530041 GSC2O15499 205 aa8.6□□□□□ -1.03
USP47-209ENST00000530041 TIAF1O95411 115 aa8.6□□□□□ -1.03
USP47-209ENST00000530041 MAOBP27338 520 aa8.6□□□□□ -1.03
USP47-209ENST00000530041 POU4F3Q15319 338 aa8.6□□□□□ -1.03
USP47-209ENST00000530041 C12orf50Q8NA57 414 aaPredicted RBP8.6□□□□□ -1.03
USP47-209ENST00000530041 TRIM56Q9BRZ2 755 aaKnown RBP8.6□□□□□ -1.03
USP47-209ENST00000530041 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
USP47-209ENST00000530041 BMP3P12645 472 aa8.59□□□□□ -1.03
USP47-209ENST00000530041 MAPK8P45983 427 aa8.59□□□□□ -1.03
USP47-209ENST00000530041 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP47-209ENST00000530041 HP1BP3Q5SSJ5 553 aaPredicted RBP8.59□□□□□ -1.03
USP47-209ENST00000530041 DTHD1Q6ZMT9 781 aa8.59□□□□□ -1.03
USP47-209ENST00000530041 CLEC10AQ8IUN9 316 aa8.59□□□□□ -1.03
USP47-209ENST00000530041 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
USP47-209ENST00000530041 GAS2O43903 313 aaKnown RBP8.58□□□□□ -1.04
USP47-209ENST00000530041 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 CTSBP07858 339 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 XRCC5P13010 732 aaKnown RBP8.58□□□□□ -1.04
USP47-209ENST00000530041 FCGRTP55899 365 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 FAM83CQ9BQN1 747 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 CORO1BQ9BR76 489 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 C7orf69Q9H7B7 122 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 RNF112Q9ULX5 631 aa8.58□□□□□ -1.04
USP47-209ENST00000530041 FAAP100Q0VG06 881 aa8.57□□□□□ -1.04
USP47-209ENST00000530041 AP3B2Q13367 1082 aa8.57□□□□□ -1.04
USP47-209ENST00000530041 BEND4Q6ZU67 534 aa8.57□□□□□ -1.04
USP47-209ENST00000530041 TRIM42Q8IWZ5 723 aa8.57□□□□□ -1.04
USP47-209ENST00000530041 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
USP47-209ENST00000530041 SCO2A0A1W2PP80 73 aa8.56□□□□□ -1.04
USP47-209ENST00000530041 HMX2A2RU54 273 aa8.56□□□□□ -1.04
USP47-209ENST00000530041 DRD2P14416 443 aa8.56□□□□□ -1.04
USP47-209ENST00000530041 SOX4Q06945 474 aaPredicted RBP8.56□□□□□ -1.04
USP47-209ENST00000530041 NFIAQ12857 509 aa8.56□□□□□ -1.04
USP47-209ENST00000530041 ALG1LQ6GMV1 187 aa8.56□□□□□ -1.04
USP47-209ENST00000530041 NXPE4Q6UWF7 544 aa8.56□□□□□ -1.04
USP47-209ENST00000530041 ECEL1O95672 775 aa8.55□□□□□ -1.04
USP47-209ENST00000530041 SGO2Q562F6 1265 aa8.55□□□□□ -1.04
USP47-209ENST00000530041 ARTNQ5T4W7 220 aa8.55□□□□□ -1.04
USP47-209ENST00000530041 RNF43Q68DV7 783 aa8.55□□□□□ -1.04
USP47-209ENST00000530041 ADH5P11766 374 aa8.54□□□□□ -1.04
USP47-209ENST00000530041 MAP4P27816 1152 aaKnown RBP8.54□□□□□ -1.04
USP47-209ENST00000530041 ZNF157P51786 506 aaPredicted RBP8.54□□□□□ -1.04
USP47-209ENST00000530041 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
USP47-209ENST00000530041 XP32Q5T750 250 aa8.54□□□□□ -1.04
USP47-209ENST00000530041 SND1Q7KZF4 910 aaKnown RBP eCLIP8.54□□□□□ -1.04
USP47-209ENST00000530041 C2CD4AQ8NCU7 369 aaPredicted RBP8.54□□□□□ -1.04
USP47-209ENST00000530041 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
USP47-209ENST00000530041 DBNDD2Q9BQY9 259 aa8.54□□□□□ -1.04
USP47-209ENST00000530041 SRCIN1Q9C0H9 1055 aa8.54□□□□□ -1.04
USP47-209ENST00000530041 RAD18Q9NS91 495 aa8.54□□□□□ -1.04
USP47-209ENST00000530041 USP11P51784 963 aa8.53□□□□□ -1.04
USP47-209ENST00000530041 PPP2R3AQ06190 1150 aa8.53□□□□□ -1.04
USP47-209ENST00000530041 LRP8Q14114 963 aa8.53□□□□□ -1.04
USP47-209ENST00000530041 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
USP47-209ENST00000530041 WWC3Q9ULE0 1092 aa8.53□□□□□ -1.04
USP47-209ENST00000530041 GIPC1O14908 333 aa8.52□□□□□ -1.05
USP47-209ENST00000530041 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
USP47-209ENST00000530041 RXRBP28702 533 aa8.52□□□□□ -1.05
USP47-209ENST00000530041 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
USP47-209ENST00000530041 ZFP64Q9NPA5 681 aa8.52□□□□□ -1.05
USP47-209ENST00000530041 GPN3Q9UHW5 284 aaPredicted RBP8.52□□□□□ -1.05
USP47-209ENST00000530041 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
USP47-209ENST00000530041 SYNGAP1Q96PV0 1343 aa8.52□□□□□ -1.05
USP47-209ENST00000530041 AOC2O75106 756 aa8.51□□□□□ -1.05
USP47-209ENST00000530041 GSTT1P30711 240 aa8.51□□□□□ -1.05
USP47-209ENST00000530041 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
USP47-209ENST00000530041 AKAP4Q5JQC9 854 aa8.51□□□□□ -1.05
USP47-209ENST00000530041 CDPF1Q6NVV7 123 aa8.51□□□□□ -1.05
USP47-209ENST00000530041 ZDHHC13Q8IUH4 622 aa8.51□□□□□ -1.05
USP47-209ENST00000530041 OSBPL7Q9BZF2 842 aa8.51□□□□□ -1.05
USP47-209ENST00000530041 GSTP1P09211 210 aaKnown RBP8.5□□□□□ -1.05
USP47-209ENST00000530041 FBLIM1Q8WUP2 373 aa8.5□□□□□ -1.05
USP47-209ENST00000530041 EZH1Q92800 747 aaPredicted RBP8.5□□□□□ -1.05
USP47-209ENST00000530041 WDR18Q9BV38 432 aa8.5□□□□□ -1.05
USP47-209ENST00000530041 YIPF2Q9BWQ6 316 aa8.5□□□□□ -1.05
USP47-209ENST00000530041 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
USP47-209ENST00000530041 ACTL7BQ9Y614 415 aa8.5□□□□□ -1.05
USP47-209ENST00000530041 FAM95CA0A1B0GW59 222 aa8.49□□□□□ -1.05
USP47-209ENST00000530041 HYAL3O43820 417 aaPredicted RBP8.49□□□□□ -1.05
USP47-209ENST00000530041 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
USP47-209ENST00000530041 CCDC86Q9H6F5 360 aaKnown RBP8.49□□□□□ -1.05
USP47-209ENST00000530041 COL19A1Q14993 1142 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 NFKBIBQ15653 356 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 PDZD3Q86UT5 571 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
USP47-209ENST00000530041 GSX1Q9H4S2 264 aaPredicted RBP8.48□□□□□ -1.05
USP47-209ENST00000530041 KRT82Q9NSB4 513 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 PPM1HQ9ULR3 514 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 AP4E1Q9UPM8 1137 aa8.48□□□□□ -1.05
USP47-209ENST00000530041 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms