RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 SUGCTQ9HAC7 445 aa13.75□□□□□ -0.21
CTNND1-217ENST00000527599 EXOSC6Q5RKV6 272 aaKnown RBP13.74□□□□□ -0.21
CTNND1-217ENST00000527599 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
CTNND1-217ENST00000527599 STOML1Q9UBI4 398 aa13.74□□□□□ -0.21
CTNND1-217ENST00000527599 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
CTNND1-217ENST00000527599 SART1O43290 800 aaKnown RBP13.73□□□□□ -0.21
CTNND1-217ENST00000527599 BMP3P12645 472 aa13.73□□□□□ -0.21
CTNND1-217ENST00000527599 DRD2P14416 443 aa13.73□□□□□ -0.21
CTNND1-217ENST00000527599 MAPK8P45983 427 aa13.73□□□□□ -0.21
CTNND1-217ENST00000527599 FCGRTP55899 365 aa13.73□□□□□ -0.21
CTNND1-217ENST00000527599 POU4F3Q15319 338 aa13.73□□□□□ -0.21
CTNND1-217ENST00000527599 NXPE4Q6UWF7 544 aa13.73□□□□□ -0.21
CTNND1-217ENST00000527599 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
CTNND1-217ENST00000527599 PDIA4P13667 645 aaKnown RBP13.72□□□□□ -0.21
CTNND1-217ENST00000527599 ZNF157P51786 506 aaPredicted RBP13.72□□□□□ -0.21
CTNND1-217ENST00000527599 RPS26P11Q5JNZ5 115 aaPredicted RBP13.72□□□□□ -0.21
CTNND1-217ENST00000527599 TRIM42Q8IWZ5 723 aa13.72□□□□□ -0.21
CTNND1-217ENST00000527599 C12orf50Q8NA57 414 aaPredicted RBP13.72□□□□□ -0.21
CTNND1-217ENST00000527599 C7orf69Q9H7B7 122 aa13.72□□□□□ -0.21
CTNND1-217ENST00000527599 HMX2A2RU54 273 aa13.71□□□□□ -0.21
CTNND1-217ENST00000527599 PATL2C9JE40 543 aaKnown RBP13.71□□□□□ -0.21
CTNND1-217ENST00000527599 CYP11A1P05108 521 aa13.7□□□□□ -0.22
CTNND1-217ENST00000527599 CYP4F12Q9HCS2 524 aa13.7□□□□□ -0.22
CTNND1-217ENST00000527599 SGO2Q562F6 1265 aa13.69□□□□□ -0.22
CTNND1-217ENST00000527599 XP32Q5T750 250 aa13.69□□□□□ -0.22
CTNND1-217ENST00000527599 DTHD1Q6ZMT9 781 aa13.69□□□□□ -0.22
CTNND1-217ENST00000527599 EIF4EBP3O60516 100 aaPredicted RBP13.68□□□□□ -0.22
CTNND1-217ENST00000527599 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
CTNND1-217ENST00000527599 C2CD4AQ8NCU7 369 aaPredicted RBP13.68□□□□□ -0.22
CTNND1-217ENST00000527599 IGLV1-40P01703 118 aa13.67□□□□□ -0.22
CTNND1-217ENST00000527599 BEND4Q6ZU67 534 aa13.67□□□□□ -0.22
CTNND1-217ENST00000527599 CLEC10AQ8IUN9 316 aa13.67□□□□□ -0.22
CTNND1-217ENST00000527599 C3orf58Q8NDZ4 430 aa13.67□□□□□ -0.22
CTNND1-217ENST00000527599 FAM83CQ9BQN1 747 aa13.67□□□□□ -0.22
CTNND1-217ENST00000527599 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
CTNND1-217ENST00000527599 SOX4Q06945 474 aaPredicted RBP13.66□□□□□ -0.22
CTNND1-217ENST00000527599 SND1Q7KZF4 910 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTNND1-217ENST00000527599 CORO1BQ9BR76 489 aa13.66□□□□□ -0.22
CTNND1-217ENST00000527599 KCNF1Q9H3M0 494 aa13.66□□□□□ -0.22
CTNND1-217ENST00000527599 RNF112Q9ULX5 631 aa13.66□□□□□ -0.22
CTNND1-217ENST00000527599 HIF3AQ9Y2N7 669 aa13.66□□□□□ -0.22
CTNND1-217ENST00000527599 GAS2O43903 313 aaKnown RBP13.65□□□□□ -0.22
CTNND1-217ENST00000527599 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
CTNND1-217ENST00000527599 FBF1Q8TES7 1133 aa13.65□□□□□ -0.22
CTNND1-217ENST00000527599 ADH5P11766 374 aa13.64□□□□□ -0.23
CTNND1-217ENST00000527599 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
CTNND1-217ENST00000527599 NFIAQ12857 509 aa13.64□□□□□ -0.23
CTNND1-217ENST00000527599 RNF43Q68DV7 783 aa13.64□□□□□ -0.23
CTNND1-217ENST00000527599 CDPF1Q6NVV7 123 aa13.64□□□□□ -0.23
CTNND1-217ENST00000527599 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
CTNND1-217ENST00000527599 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
CTNND1-217ENST00000527599 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
CTNND1-217ENST00000527599 AP3B2Q13367 1082 aa13.63□□□□□ -0.23
CTNND1-217ENST00000527599 ARTNQ5T4W7 220 aa13.63□□□□□ -0.23
CTNND1-217ENST00000527599 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
CTNND1-217ENST00000527599 XRCC5P13010 732 aaKnown RBP13.62□□□□□ -0.23
CTNND1-217ENST00000527599 ALG1LQ6GMV1 187 aa13.62□□□□□ -0.23
CTNND1-217ENST00000527599 STK35Q8TDR2 534 aa13.62□□□□□ -0.23
CTNND1-217ENST00000527599 WDR89Q96FK6 387 aaPredicted RBP13.62□□□□□ -0.23
CTNND1-217ENST00000527599 ZDHHC13Q8IUH4 622 aa13.61□□□□□ -0.23
CTNND1-217ENST00000527599 ZC3H12CQ9C0D7 883 aaKnown RBP13.61□□□□□ -0.23
CTNND1-217ENST00000527599 CCDC86Q9H6F5 360 aaKnown RBP13.61□□□□□ -0.23
CTNND1-217ENST00000527599 ACTL7BQ9Y614 415 aa13.61□□□□□ -0.23
CTNND1-217ENST00000527599 GSC2O15499 205 aa13.6□□□□□ -0.23
CTNND1-217ENST00000527599 AOC2O75106 756 aa13.6□□□□□ -0.23
CTNND1-217ENST00000527599 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
CTNND1-217ENST00000527599 FBLIM1Q8WUP2 373 aa13.6□□□□□ -0.23
CTNND1-217ENST00000527599 WDR18Q9BV38 432 aa13.6□□□□□ -0.23
CTNND1-217ENST00000527599 TMEM39AQ9NV64 488 aa13.6□□□□□ -0.23
CTNND1-217ENST00000527599 GPN3Q9UHW5 284 aaPredicted RBP13.6□□□□□ -0.23
CTNND1-217ENST00000527599 HYAL3O43820 417 aaPredicted RBP13.59□□□□□ -0.23
CTNND1-217ENST00000527599 PDZD3Q86UT5 571 aa13.59□□□□□ -0.23
CTNND1-217ENST00000527599 DBNDD2Q9BQY9 259 aa13.59□□□□□ -0.23
CTNND1-217ENST00000527599 ZFYVE1Q9HBF4 777 aa13.59□□□□□ -0.23
CTNND1-217ENST00000527599 LIG1P18858 919 aa13.58□□□□□ -0.24
CTNND1-217ENST00000527599 LRP8Q14114 963 aa13.58□□□□□ -0.24
CTNND1-217ENST00000527599 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
CTNND1-217ENST00000527599 SHISA5Q8N114 240 aa13.58□□□□□ -0.24
CTNND1-217ENST00000527599 RAD18Q9NS91 495 aa13.58□□□□□ -0.24
CTNND1-217ENST00000527599 PPP1R9AQ9ULJ8 1098 aa13.58□□□□□ -0.24
CTNND1-217ENST00000527599 ANKRD33BA6NCL7 494 aa13.57□□□□□ -0.24
CTNND1-217ENST00000527599 ZNF862O60290 1169 aa13.57□□□□□ -0.24
CTNND1-217ENST00000527599 TGFB1P01137 390 aa13.57□□□□□ -0.24
CTNND1-217ENST00000527599 LDHBP07195 334 aaKnown RBP13.57□□□□□ -0.24
CTNND1-217ENST00000527599 RXRBP28702 533 aa13.57□□□□□ -0.24
CTNND1-217ENST00000527599 USP11P51784 963 aa13.57□□□□□ -0.24
CTNND1-217ENST00000527599 GSX1Q9H4S2 264 aaPredicted RBP13.57□□□□□ -0.24
CTNND1-217ENST00000527599 ZFP64Q9NPA5 681 aa13.57□□□□□ -0.24
CTNND1-217ENST00000527599 RNF19AQ9NV58 838 aa13.57□□□□□ -0.24
CTNND1-217ENST00000527599 PRR19A6NJB7 356 aa13.56□□□□□ -0.24
CTNND1-217ENST00000527599 GSTP1P09211 210 aaKnown RBP13.56□□□□□ -0.24
CTNND1-217ENST00000527599 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
CTNND1-217ENST00000527599 HP1BP3Q5SSJ5 553 aaPredicted RBP13.56□□□□□ -0.24
CTNND1-217ENST00000527599 EZH1Q92800 747 aaPredicted RBP13.56□□□□□ -0.24
CTNND1-217ENST00000527599 FAM105AQ9NUU6 356 aa13.56□□□□□ -0.24
CTNND1-217ENST00000527599 MED26O95402 600 aa13.55□□□□□ -0.24
CTNND1-217ENST00000527599 GSTT1P30711 240 aa13.55□□□□□ -0.24
CTNND1-217ENST00000527599 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
CTNND1-217ENST00000527599 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
CTNND1-217ENST00000527599 SHKBP1Q8TBC3 707 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms