RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 UBXN1Q04323 297 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 MRPS27Q92552 414 aaKnown RBP8.64□□□□□ -1.03
LRRK1-205ENST00000526457 SNX16P57768 344 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 UTP14AQ9BVJ6 771 aaKnown RBP8.64□□□□□ -1.03
LRRK1-205ENST00000526457 URB1O60287 2271 aaKnown RBP8.64□□□□□ -1.03
LRRK1-205ENST00000526457 RPAP2Q8IXW5 612 aaPredicted RBP8.64□□□□□ -1.03
LRRK1-205ENST00000526457 ZMYM3Q14202 1370 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 ARHGAP42A6NI28 874 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 GLRX3O76003 335 aaKnown RBP8.64□□□□□ -1.03
LRRK1-205ENST00000526457 DENND2CQ68D51 928 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 POLR3DP05423 398 aaPredicted RBP8.64□□□□□ -1.03
LRRK1-205ENST00000526457 STXBP4Q6ZWJ1 553 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 AFAP1L2Q8N4X5 818 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 GOLGA8AA7E2F4 631 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 ARMC9Q7Z3E5 817 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 RTL1A6NKG5 1358 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 AFMP43652 599 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 MGARPQ8TDB4 240 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 ATP6V0A2Q9Y487 856 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 ACTN4O43707 911 aaKnown RBP8.63□□□□□ -1.03
LRRK1-205ENST00000526457 CROCCP2Q86T23 111 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 GEN1Q17RS7 908 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 MMRN2Q9H8L6 949 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 DACT1Q9NYF0 836 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 EXOC6BQ9Y2D4 811 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 ABCA10Q8WWZ4 1543 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 RAPGEF6Q8TEU7 1601 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 AKR1B15C9JRZ8 316 aaPredicted RBP8.63□□□□□ -1.03
LRRK1-205ENST00000526457 SYF2O95926 243 aaKnown RBP8.63□□□□□ -1.03
LRRK1-205ENST00000526457 PAK2Q13177 524 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 INF2Q27J81 1249 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 IFT140Q96RY7 1462 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 PRKAR2BP31323 418 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 CCT5P48643 541 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.63□□□□□ -1.03
LRRK1-205ENST00000526457 SEL1L2Q5TEA6 688 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 AIDAQ96BJ3 306 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 ESRRGP62508 458 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 CAPS2Q9BXY5 557 aa8.63□□□□□ -1.03
LRRK1-205ENST00000526457 MYO18AQ92614 2054 aaKnown RBP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 RSPH3Q86UC2 560 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 PDZD8Q8NEN9 1154 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 NUP160Q12769 1436 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 RNF40O75150 1001 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 KRT71Q3SY84 523 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 STAT6P42226 847 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 TOPBP1Q92547 1522 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 GRAMD4Q6IC98 578 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 LONP1P36776 959 aaKnown RBP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 MTMR3Q13615 1198 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 BRD3Q15059 726 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 ANKRD20A3Q5VUR7 823 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 CCDC82Q8N4S0 544 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 KIF1BPQ96EK5 621 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 MED4Q9NPJ6 270 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 ABCA5Q8WWZ7 1642 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 PSMA7O14818 248 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 RAP1GDS1P52306 607 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 ZNF692Q9BU19 519 aaPredicted RBP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 DRC3Q9H069 523 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 ORC3Q9UBD5 711 aaPredicted RBP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 RAB3GAP1Q15042 981 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 SPINK5Q9NQ38 1064 aaPredicted RBP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.62□□□□□ -1.03
LRRK1-205ENST00000526457 SERPINI2O75830 405 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 SPDL1Q96EA4 605 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 FAM169AQ9Y6X4 670 aa8.62□□□□□ -1.03
LRRK1-205ENST00000526457 LOC102724159A0A0B4J2E5 919 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 ARHGEF9O43307 516 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 PWP2Q15269 919 aaKnown RBP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 TSC1Q92574 1164 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 KLHL14Q9P2G3 628 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 GAS8O95995 478 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 MCM7P33993 719 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 TAF7Q15545 349 aaPredicted RBP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 SAAL1Q96ER3 474 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 BMP2KLQ5H9B9 411 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 MYO5CQ9NQX4 1742 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 EEF1DP29692 281 aaKnown RBP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 SERPINB6P35237 376 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 ATP1A2P50993 1020 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 FAM71BQ8TC56 605 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 SLC52A1Q9NWF4 448 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 USP16Q9Y5T5 823 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 SH3GL3Q99963 347 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 IDH1O75874 414 aaKnown RBP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 TRIM6Q9C030 488 aaPredicted RBP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 RAD50Q92878 1312 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 RNASE9P60153 205 aaKnown RBP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 IRX5P78411 483 aaPredicted RBP8.61□□□□□ -1.03
LRRK1-205ENST00000526457 RILPQ96NA2 401 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 LRRC27Q9C0I9 530 aa8.61□□□□□ -1.03
LRRK1-205ENST00000526457 PALM3A6NDB9 673 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms