RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 FCGRTP55899 365 aa10.11□□□□□ -0.79
COPB1-204ENST00000526191 FMR1Q06787 632 aaKnown RBP eCLIP10.11□□□□□ -0.791e-8■■□□□ 12
COPB1-204ENST00000526191 POU4F3Q15319 338 aa10.11□□□□□ -0.79
COPB1-204ENST00000526191 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.11□□□□□ -0.79
COPB1-204ENST00000526191 EXOSC6Q5RKV6 272 aaKnown RBP10.11□□□□□ -0.79
COPB1-204ENST00000526191 AEBP1Q8IUX7 1158 aa10.11□□□□□ -0.79
COPB1-204ENST00000526191 ZSCAN29Q8IWY8 852 aaPredicted RBP10.11□□□□□ -0.79
COPB1-204ENST00000526191 FAM20CQ8IXL6 584 aa10.11□□□□□ -0.79
COPB1-204ENST00000526191 C12orf50Q8NA57 414 aaPredicted RBP10.11□□□□□ -0.79
COPB1-204ENST00000526191 SMG8Q8ND04 991 aaKnown RBP10.11□□□□□ -0.79
COPB1-204ENST00000526191 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
COPB1-204ENST00000526191 SUGCTQ9HAC7 445 aa10.11□□□□□ -0.79
COPB1-204ENST00000526191 SCO2A0A1W2PP80 73 aa10.1□□□□□ -0.79
COPB1-204ENST00000526191 HMX2A2RU54 273 aa10.1□□□□□ -0.79
COPB1-204ENST00000526191 GAS2O43903 313 aaKnown RBP10.1□□□□□ -0.79
COPB1-204ENST00000526191 TIAF1O95411 115 aa10.1□□□□□ -0.79
COPB1-204ENST00000526191 DRD2P14416 443 aa10.1□□□□□ -0.79
COPB1-204ENST00000526191 XP32Q5T750 250 aa10.1□□□□□ -0.79
COPB1-204ENST00000526191 TRIM42Q8IWZ5 723 aa10.1□□□□□ -0.79
COPB1-204ENST00000526191 CYP4F12Q9HCS2 524 aa10.1□□□□□ -0.79
COPB1-204ENST00000526191 CYP11A1P05108 521 aa10.09□□□□□ -0.79
COPB1-204ENST00000526191 SGO2Q562F6 1265 aa10.09□□□□□ -0.79
COPB1-204ENST00000526191 NXPE4Q6UWF7 544 aa10.09□□□□□ -0.79
COPB1-204ENST00000526191 DTHD1Q6ZMT9 781 aa10.09□□□□□ -0.79
COPB1-204ENST00000526191 KCNF1Q9H3M0 494 aa10.09□□□□□ -0.79
COPB1-204ENST00000526191 WWC3Q9ULE0 1092 aa10.09□□□□□ -0.79
COPB1-204ENST00000526191 PATL2C9JE40 543 aaKnown RBP10.08□□□□□ -0.8
COPB1-204ENST00000526191 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
COPB1-204ENST00000526191 PDIA4P13667 645 aaKnown RBP10.08□□□□□ -0.8
COPB1-204ENST00000526191 RPS26P11Q5JNZ5 115 aaPredicted RBP10.08□□□□□ -0.8
COPB1-204ENST00000526191 BEND4Q6ZU67 534 aa10.08□□□□□ -0.8
COPB1-204ENST00000526191 EIF4EBP3O60516 100 aaPredicted RBP10.07□□□□□ -0.8
COPB1-204ENST00000526191 CLEC10AQ8IUN9 316 aa10.07□□□□□ -0.8
COPB1-204ENST00000526191 CORO1BQ9BR76 489 aa10.07□□□□□ -0.8
COPB1-204ENST00000526191 C2CD4AQ8NCU7 369 aaPredicted RBP10.06□□□□□ -0.8
COPB1-204ENST00000526191 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
COPB1-204ENST00000526191 FAM83CQ9BQN1 747 aa10.06□□□□□ -0.8
COPB1-204ENST00000526191 RNF112Q9ULX5 631 aa10.06□□□□□ -0.8
COPB1-204ENST00000526191 HIF3AQ9Y2N7 669 aa10.06□□□□□ -0.8
COPB1-204ENST00000526191 ADH5P11766 374 aa10.05□□□□□ -0.8
COPB1-204ENST00000526191 MAP4P27816 1152 aaKnown RBP10.05□□□□□ -0.8
COPB1-204ENST00000526191 SOX4Q06945 474 aaPredicted RBP10.05□□□□□ -0.8
COPB1-204ENST00000526191 GPN3Q9UHW5 284 aaPredicted RBP10.05□□□□□ -0.8
COPB1-204ENST00000526191 P4HBP07237 508 aaKnown RBP10.04□□□□□ -0.8
COPB1-204ENST00000526191 RXRBP28702 533 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 NFIAQ12857 509 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 AP3B2Q13367 1082 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 AKAP4Q5JQC9 854 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 ARTNQ5T4W7 220 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 RNF43Q68DV7 783 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 CDPF1Q6NVV7 123 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 PPP4R2Q9NY27 417 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 AKAP2Q9Y2D5 859 aa10.04□□□□□ -0.8
COPB1-204ENST00000526191 GSC2O15499 205 aa10.03□□□□□ -0.8
COPB1-204ENST00000526191 LRP8Q14114 963 aa10.03□□□□□ -0.8
COPB1-204ENST00000526191 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
COPB1-204ENST00000526191 SLC51AQ86UW1 340 aa10.03□□□□□ -0.8
COPB1-204ENST00000526191 FBF1Q8TES7 1133 aa10.03□□□□□ -0.8
COPB1-204ENST00000526191 FBLIM1Q8WUP2 373 aa10.03□□□□□ -0.8
COPB1-204ENST00000526191 OSBPL7Q9BZF2 842 aa10.03□□□□□ -0.8
COPB1-204ENST00000526191 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
COPB1-204ENST00000526191 SND1Q7KZF4 910 aaKnown RBP eCLIP10.02□□□□□ -0.819e-9■■■■□ 22.1
COPB1-204ENST00000526191 C3orf58Q8NDZ4 430 aa10.02□□□□□ -0.81
COPB1-204ENST00000526191 WDR18Q9BV38 432 aa10.02□□□□□ -0.81
COPB1-204ENST00000526191 ZFP64Q9NPA5 681 aa10.02□□□□□ -0.81
COPB1-204ENST00000526191 RAD18Q9NS91 495 aa10.02□□□□□ -0.81
COPB1-204ENST00000526191 ACTL7BQ9Y614 415 aa10.02□□□□□ -0.81
COPB1-204ENST00000526191 HYAL3O43820 417 aaPredicted RBP10.01□□□□□ -0.81
COPB1-204ENST00000526191 TGFB1P01137 390 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 XRCC5P13010 732 aaKnown RBP10.01□□□□□ -0.81
COPB1-204ENST00000526191 LIG1P18858 919 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 USP11P51784 963 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 HP1BP3Q5SSJ5 553 aaPredicted RBP10.01□□□□□ -0.81
COPB1-204ENST00000526191 ZDHHC13Q8IUH4 622 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 DBNDD2Q9BQY9 259 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 CCDC86Q9H6F5 360 aaKnown RBP10.01□□□□□ -0.81
COPB1-204ENST00000526191 ZFYVE1Q9HBF4 777 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 TMEM39AQ9NV64 488 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 AP4E1Q9UPM8 1137 aa10.01□□□□□ -0.81
COPB1-204ENST00000526191 AOC2O75106 756 aa10□□□□□ -0.81
COPB1-204ENST00000526191 ATP2B2Q01814 1243 aa10□□□□□ -0.81
COPB1-204ENST00000526191 ALG1LQ6GMV1 187 aa10□□□□□ -0.81
COPB1-204ENST00000526191 STK35Q8TDR2 534 aa10□□□□□ -0.81
COPB1-204ENST00000526191 WDR89Q96FK6 387 aaPredicted RBP10□□□□□ -0.81
COPB1-204ENST00000526191 DYMQ7RTS9 669 aa9.99□□□□□ -0.81
COPB1-204ENST00000526191 SHKBP1Q8TBC3 707 aa9.99□□□□□ -0.81
COPB1-204ENST00000526191 MFSD14AQ96MC6 490 aa9.99□□□□□ -0.81
COPB1-204ENST00000526191 FAM95CA0A1B0GW59 222 aa9.98□□□□□ -0.81
COPB1-204ENST00000526191 LDHBP07195 334 aaKnown RBP9.98□□□□□ -0.81
COPB1-204ENST00000526191 GSTP1P09211 210 aaKnown RBP9.98□□□□□ -0.81
COPB1-204ENST00000526191 RAB6AP20340 208 aa9.98□□□□□ -0.81
COPB1-204ENST00000526191 SSTR4P31391 388 aa9.98□□□□□ -0.81
COPB1-204ENST00000526191 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
COPB1-204ENST00000526191 NFKBIBQ15653 356 aa9.98□□□□□ -0.81
COPB1-204ENST00000526191 FAM105AQ9NUU6 356 aa9.98□□□□□ -0.81
COPB1-204ENST00000526191 PPP1R9AQ9ULJ8 1098 aa9.98□□□□□ -0.81
COPB1-204ENST00000526191 ZNF862O60290 1169 aa9.97□□□□□ -0.81
COPB1-204ENST00000526191 GSTT1P30711 240 aa9.97□□□□□ -0.81
COPB1-204ENST00000526191 TPTE2Q6XPS3 522 aa9.97□□□□□ -0.81
COPB1-204ENST00000526191 PDZD3Q86UT5 571 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms