RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
TNPO1-213ENST00000523768 FMR1NBQ8N0W7 255 aaPredicted RBP13.2□□□□□ -0.3
TNPO1-213ENST00000523768 KCNG4Q8TDN1 519 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 LPIN2Q92539 896 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
TNPO1-213ENST00000523768 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 TCRBV5S4A2TA0A5A2 114 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 PHKA1P46020 1223 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 PUM3Q15397 648 aaKnown RBP13.2□□□□□ -0.3
TNPO1-213ENST00000523768 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
TNPO1-213ENST00000523768 MAP7D2Q96T17 732 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
TNPO1-213ENST00000523768 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
TNPO1-213ENST00000523768 ZNF532Q9HCE3 1301 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 GOLGA6L19H0YKK7 550 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 EXOC5O00471 708 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 PDE6AP16499 860 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 GTF2F1P35269 517 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNPO1-213ENST00000523768 ALX1Q15699 326 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 CCDC186Q7Z3E2 898 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
TNPO1-213ENST00000523768 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
TNPO1-213ENST00000523768 ARAP2Q8WZ64 1704 aa13.18□□□□□ -0.3
TNPO1-213ENST00000523768 SH2B2O14492 632 aaPredicted RBP13.18□□□□□ -0.3
TNPO1-213ENST00000523768 STK38Q15208 465 aa13.18□□□□□ -0.3
TNPO1-213ENST00000523768 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
TNPO1-213ENST00000523768 CLIC4Q9Y696 253 aa13.18□□□□□ -0.3
TNPO1-213ENST00000523768 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
TNPO1-213ENST00000523768 CYB5R4Q7L1T6 521 aa13.18□□□□□ -0.3
TNPO1-213ENST00000523768 MRFAP1L1Q96HT8 127 aa13.18□□□□□ -0.3
TNPO1-213ENST00000523768 TMEM87BQ96K49 555 aa13.18□□□□□ -0.3
TNPO1-213ENST00000523768 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
TNPO1-213ENST00000523768 SPTLC2O15270 562 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
TNPO1-213ENST00000523768 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
TNPO1-213ENST00000523768 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 MYO5AQ9Y4I1 1855 aaKnown RBP13.17□□□□□ -0.3
TNPO1-213ENST00000523768 CDKL5O76039 1030 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
TNPO1-213ENST00000523768 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
TNPO1-213ENST00000523768 MTERF4Q7Z6M4 381 aaKnown RBP13.17□□□□□ -0.3
TNPO1-213ENST00000523768 DHX40Q8IX18 779 aaKnown RBP13.17□□□□□ -0.3
TNPO1-213ENST00000523768 FAM13BQ9NYF5 915 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 SLIT2O94813 1529 aa13.17□□□□□ -0.3
TNPO1-213ENST00000523768 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 APPP05067 770 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 SLC5A1P13866 664 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
TNPO1-213ENST00000523768 NDUFA8P51970 172 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 APOA5Q6Q788 366 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
TNPO1-213ENST00000523768 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 SGMS1Q86VZ5 419 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 RAB11FIP4Q86YS3 637 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 CEP57L1Q8IYX8 460 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 SPATA5Q8NB90 893 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 IGDCC4Q8TDY8 1250 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 SYTL4Q96C24 671 aaPredicted RBP13.16□□□□□ -0.3
TNPO1-213ENST00000523768 SDF4Q9BRK5 362 aa13.16□□□□□ -0.3
TNPO1-213ENST00000523768 BECN2A8MW95 431 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
TNPO1-213ENST00000523768 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
TNPO1-213ENST00000523768 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 KIAA1468Q9P260 1216 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 B4E1Z4 1266 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 MAP3K12Q12852 859 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 LRMPQ12912 555 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.3
TNPO1-213ENST00000523768 SUSD4Q5VX71 490 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
TNPO1-213ENST00000523768 UBE2Q2Q8WVN8 375 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 NEDD4P46934 1319 aa13.15□□□□□ -0.3
TNPO1-213ENST00000523768 DOCK2Q92608 1830 aa13.15□□□□□ -0.31
TNPO1-213ENST00000523768 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.31
TNPO1-213ENST00000523768 CMA1P23946 247 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 LIFRP42702 1097 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 SLC39A14Q15043 492 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
TNPO1-213ENST00000523768 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 LY9Q9HBG7 655 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 NEMFO60524 1076 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 CDC27P30260 824 aa13.14□□□□□ -0.31
TNPO1-213ENST00000523768 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms