RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 KIAA1324LA8MWY0 1029 aaPredicted RBP7.72□□□□□ -1.17
CLK4-213ENST00000523013 COBLO75128 1261 aa7.72□□□□□ -1.17
CLK4-213ENST00000523013 ITPKAP23677 461 aa7.72□□□□□ -1.17
CLK4-213ENST00000523013 CCDC74AQ96AQ1 378 aa7.72□□□□□ -1.17
CLK4-213ENST00000523013 TRIM56Q9BRZ2 755 aaKnown RBP7.72□□□□□ -1.17
CLK4-213ENST00000523013 EHD4Q9H223 541 aa7.72□□□□□ -1.17
CLK4-213ENST00000523013 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
CLK4-213ENST00000523013 B3GALT4O96024 378 aa7.71□□□□□ -1.18
CLK4-213ENST00000523013 MAOBP27338 520 aa7.71□□□□□ -1.18
CLK4-213ENST00000523013 C2CD4AQ8NCU7 369 aaPredicted RBP7.71□□□□□ -1.18
CLK4-213ENST00000523013 SHKBP1Q8TBC3 707 aa7.71□□□□□ -1.18
CLK4-213ENST00000523013 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.18
CLK4-213ENST00000523013 ABCB6Q9NP58 842 aa7.71□□□□□ -1.18
CLK4-213ENST00000523013 ECEL1O95672 775 aa7.7□□□□□ -1.18
CLK4-213ENST00000523013 SOX4Q06945 474 aaPredicted RBP7.7□□□□□ -1.18
CLK4-213ENST00000523013 CDPF1Q6NVV7 123 aa7.7□□□□□ -1.18
CLK4-213ENST00000523013 PRPF40BQ6NWY9 871 aaKnown RBP7.7□□□□□ -1.18
CLK4-213ENST00000523013 GLIS3Q8NEA6 775 aa7.7□□□□□ -1.18
CLK4-213ENST00000523013 TMC1Q8TDI8 760 aa7.7□□□□□ -1.18
CLK4-213ENST00000523013 DMRTB1Q96MA1 342 aa7.7□□□□□ -1.18
CLK4-213ENST00000523013 MFSD14AQ96MC6 490 aa7.7□□□□□ -1.18
CLK4-213ENST00000523013 GNEQ9Y223 722 aaKnown RBP7.7□□□□□ -1.18
CLK4-213ENST00000523013 CYP11A1P05108 521 aa7.69□□□□□ -1.18
CLK4-213ENST00000523013 SPINK2P20155 84 aa7.69□□□□□ -1.18
CLK4-213ENST00000523013 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
CLK4-213ENST00000523013 POU4F3Q15319 338 aa7.69□□□□□ -1.18
CLK4-213ENST00000523013 FBLIM1Q8WUP2 373 aa7.69□□□□□ -1.18
CLK4-213ENST00000523013 CSRNP1Q96S65 589 aa7.69□□□□□ -1.18
CLK4-213ENST00000523013 WDR64B1ANS9 1081 aa7.68□□□□□ -1.18
CLK4-213ENST00000523013 ADH5P11766 374 aa7.68□□□□□ -1.18
CLK4-213ENST00000523013 TMEM238LA0A1B0GVL6 79 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 FAM95CA0A1B0GW59 222 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 ADAMTS4O75173 837 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 BRD1O95696 1058 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 F13BP05160 661 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 RXRBP28702 533 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 USP11P51784 963 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 GRM2Q14416 872 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 INTS5Q6P9B9 1019 aaKnown RBP7.67□□□□□ -1.18
CLK4-213ENST00000523013 TMC7Q7Z402 723 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 SHISA5Q8N114 240 aa7.67□□□□□ -1.18
CLK4-213ENST00000523013 EPS8L3Q8TE67 593 aaKnown RBP7.67□□□□□ -1.18
CLK4-213ENST00000523013 EZH1Q92800 747 aaPredicted RBP7.67□□□□□ -1.18
CLK4-213ENST00000523013 GADD45BO75293 160 aaPredicted RBP7.66□□□□□ -1.18
CLK4-213ENST00000523013 GRIK1P39086 918 aa7.66□□□□□ -1.18
CLK4-213ENST00000523013 FAAP100Q0VG06 881 aa7.66□□□□□ -1.18
CLK4-213ENST00000523013 ACTL7BQ9Y614 415 aa7.66□□□□□ -1.18
CLK4-213ENST00000523013 HOXA10P31260 410 aaPredicted RBP7.65□□□□□ -1.18
CLK4-213ENST00000523013 NFKBIBQ15653 356 aa7.65□□□□□ -1.18
CLK4-213ENST00000523013 RPS26P11Q5JNZ5 115 aaPredicted RBP7.65□□□□□ -1.18
CLK4-213ENST00000523013 PI16Q6UXB8 463 aa7.65□□□□□ -1.18
CLK4-213ENST00000523013 DTX1Q86Y01 620 aa7.65□□□□□ -1.18
CLK4-213ENST00000523013 FBXL6Q8N531 539 aa7.65□□□□□ -1.18
CLK4-213ENST00000523013 DDX54Q8TDD1 881 aaKnown RBP7.65□□□□□ -1.18
CLK4-213ENST00000523013 CORO1BQ9BR76 489 aa7.65□□□□□ -1.18
CLK4-213ENST00000523013 DCTN4Q9UJW0 460 aa7.65□□□□□ -1.18
CLK4-213ENST00000523013 TRAK1Q9UPV9 953 aa7.65□□□□□ -1.18
CLK4-213ENST00000523013 ADMP35318 185 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 DSC3Q14574 896 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 AKAP4Q5JQC9 854 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 HP1BP3Q5SSJ5 553 aaPredicted RBP7.64□□□□□ -1.19
CLK4-213ENST00000523013 PAOXQ6QHF9 649 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 GSX1Q9H4S2 264 aaPredicted RBP7.64□□□□□ -1.19
CLK4-213ENST00000523013 ZFYVE1Q9HBF4 777 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 PIM2Q9P1W9 311 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 BIN2Q9UBW5 565 aaPredicted RBP7.64□□□□□ -1.19
CLK4-213ENST00000523013 PRKAG2Q9UGJ0 569 aa7.64□□□□□ -1.19
CLK4-213ENST00000523013 AP3B2Q13367 1082 aa7.63□□□□□ -1.19
CLK4-213ENST00000523013 GATA6Q92908 595 aa7.63□□□□□ -1.19
CLK4-213ENST00000523013 WDR18Q9BV38 432 aa7.63□□□□□ -1.19
CLK4-213ENST00000523013 FAM105AQ9NUU6 356 aa7.63□□□□□ -1.19
CLK4-213ENST00000523013 OAS3Q9Y6K5 1087 aaKnown RBP7.63□□□□□ -1.19
CLK4-213ENST00000523013 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
CLK4-213ENST00000523013 AOC2O75106 756 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 NFICP08651 508 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 ZNF157P51786 506 aaPredicted RBP7.62□□□□□ -1.19
CLK4-213ENST00000523013 GP2P55259 537 aaKnown RBP7.62□□□□□ -1.19
CLK4-213ENST00000523013 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 ZAR1Q86SH2 424 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 YIPF2Q9BWQ6 316 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 SEMA6CQ9H3T2 930 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 ACSS3Q9H6R3 686 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 RAD18Q9NS91 495 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 ATG3Q9NT62 314 aa7.62□□□□□ -1.19
CLK4-213ENST00000523013 SYNGAP1Q96PV0 1343 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 TREHO43280 583 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 PDE3AQ14432 1141 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 CPSF6Q16630 551 aaKnown RBP eCLIP7.61□□□□□ -1.19
CLK4-213ENST00000523013 MSMPQ1L6U9 139 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 GIMAP7Q8NHV1 300 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 WDR89Q96FK6 387 aaPredicted RBP7.61□□□□□ -1.19
CLK4-213ENST00000523013 OSBPL1AQ9BXW6 950 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 PPP1R9AQ9ULJ8 1098 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 AP4E1Q9UPM8 1137 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 LEMD3Q9Y2U8 911 aa7.61□□□□□ -1.19
CLK4-213ENST00000523013 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.6□□□□□ -1.19
CLK4-213ENST00000523013 FOSL1P15407 271 aa7.6□□□□□ -1.19
CLK4-213ENST00000523013 RAB6AP20340 208 aa7.6□□□□□ -1.19
CLK4-213ENST00000523013 MAPK1P28482 360 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms