RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 CC2D2BQ6DHV5 1058 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 KDF1Q8NAX2 398 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-216ENST00000521918 PNNQ9H307 717 aaKnown RBP7.79□□□□□ -1.16
SPIDR-216ENST00000521918 OSBPL3Q9H4L5 887 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 ADAMTS8Q9UP79 889 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 USP16Q9Y5T5 823 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 CHD4Q14839 1912 aa7.79□□□□□ -1.16
SPIDR-216ENST00000521918 CAMTA2O94983 1202 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 A1BGP04217 495 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 NEFMP07197 916 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
SPIDR-216ENST00000521918 CANXP27824 592 aaKnown RBP7.78□□□□□ -1.16
SPIDR-216ENST00000521918 LMOD1P29536 600 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-216ENST00000521918 RIPK4P57078 832 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
SPIDR-216ENST00000521918 USP4Q13107 963 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 WDR43Q15061 677 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPIDR-216ENST00000521918 CCDC184Q52MB2 194 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
SPIDR-216ENST00000521918 CCDC146Q8IYE0 955 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 PNISRQ8TF01 805 aaKnown RBP7.78□□□□□ -1.16
SPIDR-216ENST00000521918 RUNDC1Q96C34 613 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 MIS18AQ9NYP9 233 aa7.78□□□□□ -1.16
SPIDR-216ENST00000521918 DLEC1Q9Y238 1755 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 CARMIL3Q8ND23 1372 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 PIP4K2AP48426 406 aaPredicted RBP7.77□□□□□ -1.17
SPIDR-216ENST00000521918 NFIXQ14938 502 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 EML3Q32P44 896 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 MEIOBQ8N635 442 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 BABAM1Q9NWV8 329 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 RRP7AQ9Y3A4 280 aaKnown RBP7.77□□□□□ -1.17
SPIDR-216ENST00000521918 PARP3Q9Y6F1 533 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 ANKRD31Q8N7Z5 1873 aa7.77□□□□□ -1.17
SPIDR-216ENST00000521918 ARFGEF1Q9Y6D6 1849 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 ADCY9O60503 1353 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 COL11A2P13942 1736 aaPredicted RBP7.76□□□□□ -1.17
SPIDR-216ENST00000521918 A0A087WZG4 1122 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 KCNA3P22001 575 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 RFX1P22670 979 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 YY1P25490 414 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 TGFB2P61812 414 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 LMOD3Q0VAK6 560 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 GPR162Q16538 588 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 LRP10Q7Z4F1 713 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
SPIDR-216ENST00000521918 CHL1O00533 1208 aa7.75□□□□□ -1.17
SPIDR-216ENST00000521918 MYCP01106 439 aaPredicted RBP7.75□□□□□ -1.17
SPIDR-216ENST00000521918 ADH1AP07327 375 aa7.75□□□□□ -1.17
SPIDR-216ENST00000521918 TBC1D9BQ66K14 1250 aa7.75□□□□□ -1.17
SPIDR-216ENST00000521918 MKRN1Q9UHC7 482 aaKnown RBP7.75□□□□□ -1.17
SPIDR-216ENST00000521918 TSPYL4Q9UJ04 414 aa7.75□□□□□ -1.17
SPIDR-216ENST00000521918 NOD1Q9Y239 953 aa7.75□□□□□ -1.17
SPIDR-216ENST00000521918 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-216ENST00000521918 A0A0G2JLW4 131 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 GRIN3BO60391 1043 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 SERPINB2P05120 415 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 ZNF853P0CG23 659 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 DPEP1P16444 411 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 CLDN10P78369 228 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 AGBL1Q96MI9 1066 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 ARID3AQ99856 593 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 DACH1Q9UI36 760 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 ATP10DQ9P241 1426 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 ERBB4Q15303 1308 aa7.74□□□□□ -1.17
SPIDR-216ENST00000521918 ATP5J2-PTCD1G3V325 749 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 APAF1O14727 1248 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 BMP1P13497 986 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 GTF2IP78347 998 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 PRR5LQ6MZQ0 368 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 CLEC4GQ6UXB4 293 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 CYP2U1Q7Z449 544 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 ATP13A2Q9NQ11 1180 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 WWC3Q9ULE0 1092 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 KIAA1024Q9UPX6 916 aa7.73□□□□□ -1.17
SPIDR-216ENST00000521918 TNRC6CQ9HCJ0 1690 aaKnown RBP7.73□□□□□ -1.17
SPIDR-216ENST00000521918 ZBTB7BO15156 539 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-216ENST00000521918 DKK1O94907 266 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 STAU1O95793 577 aaKnown RBP7.72□□□□□ -1.17
SPIDR-216ENST00000521918 CHRNA5P30532 468 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 SCNN1DP51172 638 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 HLFQ16534 295 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 KRT24Q2M2I5 525 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 PROSER3Q2NL68 480 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 MRPL14Q6P1L8 145 aaKnown RBP7.72□□□□□ -1.17
SPIDR-216ENST00000521918 BICDL1Q6ZP65 573 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 TTLL7Q6ZT98 887 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 PBXIP1Q96AQ6 731 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 VRTNQ9H8Y1 702 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 NUP98P52948 1817 aa7.72□□□□□ -1.17
SPIDR-216ENST00000521918 IBTKQ9P2D0 1353 aaPredicted RBP7.71□□□□□ -1.17
SPIDR-216ENST00000521918 ARFGEF2Q9Y6D5 1785 aa7.71□□□□□ -1.17
SPIDR-216ENST00000521918 RIC1Q4ADV7 1423 aa7.71□□□□□ -1.17
SPIDR-216ENST00000521918 ERVV-1B6SEH8 477 aa7.71□□□□□ -1.18
SPIDR-216ENST00000521918 ANP32CO43423 234 aa7.71□□□□□ -1.18
SPIDR-216ENST00000521918 HOXB7P09629 217 aa7.71□□□□□ -1.18
SPIDR-216ENST00000521918 PTK7Q13308 1070 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms