RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 FEZ1Q99689 392 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 ZNF202O95125 648 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 CSF1RP07333 972 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 CMA1P23946 247 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 TMOD3Q9NYL9 352 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 STARD3NLO95772 234 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 NLRP12P59046 1061 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 CCDC150Q8NCX0 1101 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 FBXW7Q969H0 707 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 KCND1Q9NSA2 647 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 ANGEL1Q9UNK9 670 aaKnown RBP13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 CBX1P83916 185 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 CARD10Q9BWT7 1032 aa13.15□□□□□ -0.3
NUDCD1-203ENST00000519607 ZMYM6O95789 1325 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 FOXP2O15409 715 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 SMC2O95347 1197 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 APPP05067 770 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 ANTXR2P58335 489 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 KIF23Q02241 960 aaPredicted RBP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 TRIM29Q14134 588 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 CCDC85AQ96PX6 553 aaPredicted RBP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 CNNM1Q9NRU3 951 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 ANKRD18BA2A2Z9 1011 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 ADD2P35612 726 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 CCZ1BP86790 482 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 CCZ1P86791 482 aaPredicted RBP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 SCARF1Q14162 830 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 SLC39A14Q15043 492 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
NUDCD1-203ENST00000519607 TUBB4AP04350 444 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 EVA1CP58658 441 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 UBE3CQ15386 1083 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 DPCR1Q3MIW9 517 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 RIPOR2Q9Y4F9 1068 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 MYH3P11055 1940 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 AKAP11Q9UKA4 1901 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 A0A087WWV3 80 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 PPP6R2O75170 966 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 PFKFB1P16118 471 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 ITGA6P23229 1130 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 SYKP43405 635 aa13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 GIGYF2Q6Y7W6 1299 aaKnown RBP13.13□□□□□ -0.31
NUDCD1-203ENST00000519607 COL5A2P05997 1499 aaPredicted RBP13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 C4AP0C0L4 1744 aa13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 IKBKBO14920 756 aa13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 MCAMP43121 646 aa13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 IFNKQ9P0W0 207 aa13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
NUDCD1-203ENST00000519607 CCP110O43303 1012 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 IDH1O75874 414 aaKnown RBP13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 AXDND1Q5T1B0 1012 aaPredicted RBP13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 RAB11FIP4Q86YS3 637 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 USP27XA6NNY8 438 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 BIN1O00499 593 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■■■■□ 25.8
NUDCD1-203ENST00000519607 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 KCNJ6P48051 423 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 UTP14CQ5TAP6 766 aaKnown RBP13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 PI16Q6UXB8 463 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
NUDCD1-203ENST00000519607 OGFRQ9NZT2 677 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms