RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 RIOK1Q9BRS2 568 aaKnown RBP9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 MYH2Q9UKX2 1941 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 SCRN1Q12765 414 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 GRAPQ13588 217 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 GRAPLQ8TC17 118 aaPredicted RBP9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 STK36Q9NRP7 1315 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZPR1O75312 459 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 GYS1P13807 737 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 PDIA3P30101 505 aaKnown RBP9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 LIFRP42702 1097 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 KCNJ4P48050 445 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 RESTQ13127 1097 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 SLFNL1Q499Z3 407 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 SLC9C2Q5TAH2 1124 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 FAM84BQ96KN1 310 aaPredicted RBP9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 LEMD3Q9Y2U8 911 aa9.49□□□□□ -0.89
ARFGEF1-204ENST00000518290 GSG1L2A8MUP6 293 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 CSPP1Q1MSJ5 1256 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 TRAPPC3LQ5T215 181 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 MCTP1Q6DN14 999 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 NCOA7Q8NI08 942 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 SH2B2O14492 632 aaPredicted RBP9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 MCM5P33992 734 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 RPS8P62241 208 aaKnown RBP9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 NFIXQ14938 502 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZNF384Q8TF68 577 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 CELF1Q92879 486 aaKnown RBP9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZSCAN16Q9H4T2 348 aaPredicted RBP9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 CNNM2Q9H8M5 875 aa9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 SRP68Q9UHB9 627 aaKnown RBP9.48□□□□□ -0.89
ARFGEF1-204ENST00000518290 A0A0G2JLW4 131 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 UBE2HP62256 183 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 RBM43Q6ZSC3 357 aaKnown RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 KRT27Q7Z3Y8 459 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 TBC1D10CQ8IV04 446 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 CRAMP1Q96RY5 1269 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 GNL3LQ9NVN8 582 aaKnown RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZSCAN23Q3MJ62 389 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 GLIPR1L2Q4G1C9 344 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZNF772Q68DY9 489 aaPredicted RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 QTRT2Q9H974 415 aaKnown RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 SIPA1L1O43166 1804 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 BRCA1P38398 1863 aaKnown RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 ADD1P35611 737 aaKnown RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 BCAMP50895 628 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 MEX3CQ5U5Q3 659 aaKnown RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 CERS3Q8IU89 383 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 IGDCC4Q8TDY8 1250 aa9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 CCDC85AQ96PX6 553 aaPredicted RBP9.47□□□□□ -0.89
ARFGEF1-204ENST00000518290 GOLGA6L3A6NEY3 463 aa9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 SBK1Q52WX2 424 aa9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 PRR5LQ6MZQ0 368 aa9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 NBPF5PQ86XG9 351 aaPredicted RBP9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 IFNL3Q8IZI9 196 aa9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 PROM2Q8N271 834 aa9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 MYH1P12882 1939 aa9.46□□□□□ -0.89
ARFGEF1-204ENST00000518290 ZNF213O14771 459 aa9.46□□□□□ -0.9
ARFGEF1-204ENST00000518290 IL1R1P14778 569 aa9.46□□□□□ -0.9
ARFGEF1-204ENST00000518290 TTLL5Q6EMB2 1281 aa9.46□□□□□ -0.9
ARFGEF1-204ENST00000518290 MKRN1Q9UHC7 482 aaKnown RBP9.46□□□□□ -0.9
ARFGEF1-204ENST00000518290 LETM1O95202 739 aaPredicted RBP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 USP48Q86UV5 1035 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 TDRD7Q8NHU6 1098 aaKnown RBP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 BRF1Q92994 677 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 XDHP47989 1333 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 XRCC6P12956 609 aaKnown RBP eCLIP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 NSUN4Q96CB9 384 aaKnown RBP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 FUCA2Q9BTY2 467 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 KRT23Q9C075 422 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 LY9Q9HBG7 655 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 TMEM63CQ9P1W3 806 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 KIF3AQ9Y496 699 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 NEDD4P46934 1319 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 PRC1O43663 620 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 RFC4P35249 363 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 PPP2R5BQ15173 497 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 ADGRA1Q86SQ6 560 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 GAS2L3Q86XJ1 694 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 MAGEB6Q8N7X4 407 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 NECAB1Q8N987 351 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 GRPEL1Q9HAV7 217 aa9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 ANGEL1Q9UNK9 670 aaKnown RBP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 DDX49Q9Y6V7 483 aaKnown RBP9.45□□□□□ -0.9
ARFGEF1-204ENST00000518290 ORC4O43929 436 aa9.44□□□□□ -0.9
ARFGEF1-204ENST00000518290 WASHC4Q2M389 1173 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 322 ms