RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 MRPS27Q92552 414 aaKnown RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 TMEM87BQ96K49 555 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 TRIM5Q9C035 493 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 FTOQ9C0B1 505 aaKnown RBP eCLIP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 ANO10Q9NW15 660 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 PCDHA7Q9UN72 937 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 NUP98P52948 1817 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 TCRBV5S4A2TA0A5A2 114 aa10.77□□□□□ -0.68
CPNE4-210ENST00000512332 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.68
CPNE4-210ENST00000512332 FSIP1Q8NA03 581 aa10.77□□□□□ -0.68
CPNE4-210ENST00000512332 SPC24Q8NBT2 197 aa10.77□□□□□ -0.68
CPNE4-210ENST00000512332 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.68
CPNE4-210ENST00000512332 NBPF3Q9H094 633 aa10.77□□□□□ -0.68
CPNE4-210ENST00000512332 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.77□□□□□ -0.69
CPNE4-210ENST00000512332 GOLGA6L19H0YKK7 550 aa10.77□□□□□ -0.69
CPNE4-210ENST00000512332 CDKL5O76039 1030 aa10.77□□□□□ -0.69
CPNE4-210ENST00000512332 PDE6AP16499 860 aa10.77□□□□□ -0.69
CPNE4-210ENST00000512332 EIF5P55010 431 aaKnown RBP10.77□□□□□ -0.69
CPNE4-210ENST00000512332 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.69
CPNE4-210ENST00000512332 STRBPQ96SI9 672 aaKnown RBP10.77□□□□□ -0.69
CPNE4-210ENST00000512332 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
CPNE4-210ENST00000512332 PIH1D3Q9NQM4 214 aaKnown RBP10.77□□□□□ -0.69
CPNE4-210ENST00000512332 PYCARDQ9ULZ3 195 aa10.77□□□□□ -0.69
CPNE4-210ENST00000512332 UBN2Q6ZU65 1347 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 ZNF532Q9HCE3 1301 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 GUCY1B3Q02153 619 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 CCDC186Q7Z3E2 898 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 SGMS1Q86VZ5 419 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 NAT10Q9H0A0 1025 aaKnown RBP10.76□□□□□ -0.69
CPNE4-210ENST00000512332 SH2B2O14492 632 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-210ENST00000512332 SPTLC2O15270 562 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 NEMFO60524 1076 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 IDH1O75874 414 aaKnown RBP10.76□□□□□ -0.69
CPNE4-210ENST00000512332 PTGS1P23219 599 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 PHKA1P46020 1223 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 FOSBP53539 338 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 KIF23Q02241 960 aaPredicted RBP10.76□□□□□ -0.69
CPNE4-210ENST00000512332 STK38Q15208 465 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 CPLX2Q6PUV4 134 aaKnown RBP10.76□□□□□ -0.69
CPNE4-210ENST00000512332 SYNE3Q6ZMZ3 975 aa10.76□□□□□ -0.69
CPNE4-210ENST00000512332 ARAP2Q8WZ64 1704 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
CPNE4-210ENST00000512332 SLC5A1P13866 664 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 LIFRP42702 1097 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 TBC1D10CQ8IV04 446 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 CEP57L1Q8IYX8 460 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 SPATA5Q8NB90 893 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 IGDCC4Q8TDY8 1250 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 BPIFA3Q9BQP9 254 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 MTA3Q9BTC8 594 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 RTL9Q8NET4 1388 aa10.75□□□□□ -0.69
CPNE4-210ENST00000512332 CMA1P23946 247 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 METAP2P50579 478 aaKnown RBP eCLIP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 RBM6P78332 1123 aaKnown RBP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 MAP3K12Q12852 859 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 SF3A1Q15459 793 aaKnown RBP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 PARP10Q53GL7 1025 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 ANO1Q5XXA6 986 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 APOA5Q6Q788 366 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 C11orf57Q6ZUT1 292 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 CYB5R4Q7L1T6 521 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 DHX40Q8IX18 779 aaKnown RBP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 DRC7Q8IY82 874 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 C17orf53Q8N3J3 647 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 AIDAQ96BJ3 306 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 CLIC4Q9Y696 253 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 C4AP0C0L4 1744 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 C4BP0C0L5 1744 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 BECN2A8MW95 431 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 APPP05067 770 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 POLR3DP05423 398 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 SLC39A14Q15043 492 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 AXDND1Q5T1B0 1012 aaPredicted RBP10.74□□□□□ -0.69
CPNE4-210ENST00000512332 TIGD1Q96MW7 591 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 SDF4Q9BRK5 362 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 CNNM2Q9H8M5 875 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 KIAA1468Q9P260 1216 aa10.74□□□□□ -0.69
CPNE4-210ENST00000512332 NID2Q14112 1375 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 PPFIA3O75145 1194 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 PPP6R2O75170 966 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 GNAT2P19087 354 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 NDUFA8P51970 172 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 CHAF1AQ13111 956 aaPredicted RBP10.73□□□□□ -0.69
CPNE4-210ENST00000512332 NTRK3Q16288 839 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 OTUD7BQ6GQQ9 843 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 INTS5Q6P9B9 1019 aaKnown RBP10.73□□□□□ -0.69
CPNE4-210ENST00000512332 UTP14AQ9BVJ6 771 aaKnown RBP10.73□□□□□ -0.69
CPNE4-210ENST00000512332 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 WWC3Q9ULE0 1092 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 COL22A1Q8NFW1 1626 aaPredicted RBP10.73□□□□□ -0.69
CPNE4-210ENST00000512332 STK36Q9NRP7 1315 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 FAM237AA0A1B0GTK4 181 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 KIF28PB7ZC32 967 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 ZBTB43O43298 467 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 U2AF2P26368 475 aaKnown RBP eCLIP10.73□□□□□ -0.69
CPNE4-210ENST00000512332 GLIPR1L2Q4G1C9 344 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 SUSD4Q5VX71 490 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 IFNL3Q8IZI9 196 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms