RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RPS6KB1P23443 525 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 GSTO1P78417 241 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 ADCK5Q3MIX3 580 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 PDRG1Q9NUG6 133 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 CHMP5Q9NZZ3 219 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 SUGT1Q9Y2Z0 365 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 DLEC1Q9Y238 1755 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 FOXP2O15409 715 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 FGAP02671 866 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 NSUN4Q96CB9 384 aaKnown RBP18.09■□□□□ 0.49
SCLT1-209ENST00000511426 TMX3Q96JJ7 454 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 RTFDC1Q9BY42 306 aaPredicted RBP18.09■□□□□ 0.49
SCLT1-209ENST00000511426 ZC3H12CQ9C0D7 883 aaKnown RBP18.09■□□□□ 0.49
SCLT1-209ENST00000511426 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
SCLT1-209ENST00000511426 LIMCH1Q9UPQ0 1083 aa18.09■□□□□ 0.49
SCLT1-209ENST00000511426 FAM205AQ6ZU69 1335 aa18.08■□□□□ 0.49
SCLT1-209ENST00000511426 MBD4O95243 580 aa18.08■□□□□ 0.48
SCLT1-209ENST00000511426 DDIT3P35638 169 aa18.08■□□□□ 0.48
SCLT1-209ENST00000511426 GIMAP6Q6P9H5 292 aa18.08■□□□□ 0.48
SCLT1-209ENST00000511426 FBXL16Q8N461 479 aa18.08■□□□□ 0.48
SCLT1-209ENST00000511426 KIF13BQ9NQT8 1826 aa18.08■□□□□ 0.48
SCLT1-209ENST00000511426 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
SCLT1-209ENST00000511426 ZNF213O14771 459 aa18.07■□□□□ 0.48
SCLT1-209ENST00000511426 SLF2Q8IX21 1173 aa18.07■□□□□ 0.48
SCLT1-209ENST00000511426 SUPT20HQ8NEM7 779 aa18.07■□□□□ 0.48
SCLT1-209ENST00000511426 WDR19Q8NEZ3 1342 aa18.07■□□□□ 0.48
SCLT1-209ENST00000511426 MYO5AQ9Y4I1 1855 aaKnown RBP18.07■□□□□ 0.48
SCLT1-209ENST00000511426 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
SCLT1-209ENST00000511426 LDHCP07864 332 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 POLD1P28340 1107 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 AK2P54819 239 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 CHAF1AQ13111 956 aaPredicted RBP18.06■□□□□ 0.48
SCLT1-209ENST00000511426 DZIP1Q86YF9 867 aaKnown RBP18.06■□□□□ 0.48
SCLT1-209ENST00000511426 NT5C2P49902 561 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 TGFB2P61812 414 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 MECOMQ03112 1051 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 DHX32Q7L7V1 743 aaKnown RBP18.06■□□□□ 0.48
SCLT1-209ENST00000511426 CHMP4CQ96CF2 233 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 RIOK1Q9BRS2 568 aaKnown RBP18.06■□□□□ 0.48
SCLT1-209ENST00000511426 NAPBQ9H115 298 aa18.06■□□□□ 0.48
SCLT1-209ENST00000511426 SLKQ9H2G2 1235 aaPredicted RBP18.06■□□□□ 0.48
SCLT1-209ENST00000511426 E7EWF7 191 aa18.05■□□□□ 0.48
SCLT1-209ENST00000511426 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
SCLT1-209ENST00000511426 PODNQ7Z5L7 613 aa18.05■□□□□ 0.48
SCLT1-209ENST00000511426 IFNL3Q8IZI9 196 aa18.05■□□□□ 0.48
SCLT1-209ENST00000511426 C7orf43Q8WVR3 580 aa18.05■□□□□ 0.48
SCLT1-209ENST00000511426 CCDC88AQ3V6T2 1871 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 LAMA4Q16363 1823 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 SNED1Q8TER0 1413 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 APPP05067 770 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 PRDX5P30044 214 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 LCORLQ8N3X6 602 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 AGXT2Q9BYV1 514 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 ARMT1Q9H993 441 aa18.04■□□□□ 0.48
SCLT1-209ENST00000511426 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 PCP11498 1178 aaKnown RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 PDIA4P13667 645 aaKnown RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 FKBP1AP62942 108 aaKnown RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 TRDNQ13061 729 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 FAM163AQ96GL9 167 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 PDGFDQ9GZP0 370 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 VPS33BQ9H267 617 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 SLC4A4Q9Y6R1 1079 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 TIAM2Q8IVF5 1701 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 BAG3O95817 575 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 CHRNA5P30532 468 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 NUCB2P80303 420 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 RALYLQ86SE5 291 aaKnown RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 CRNKL1Q9BZJ0 848 aaKnown RBP18.03■□□□□ 0.48
SCLT1-209ENST00000511426 CNNM2Q9H8M5 875 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 ATP8A2Q9NTI2 1148 aa18.03■□□□□ 0.48
SCLT1-209ENST00000511426 PPP4CP60510 307 aa18.02■□□□□ 0.47
SCLT1-209ENST00000511426 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.47
SCLT1-209ENST00000511426 RTKN2Q8IZC4 609 aa18.02■□□□□ 0.47
SCLT1-209ENST00000511426 ZNF384Q8TF68 577 aa18.02■□□□□ 0.47
SCLT1-209ENST00000511426 NOL10Q9BSC4 688 aaKnown RBP18.02■□□□□ 0.47
SCLT1-209ENST00000511426 MTA3Q9BTC8 594 aa18.02■□□□□ 0.47
SCLT1-209ENST00000511426 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.47
SCLT1-209ENST00000511426 EPB41L4AQ9HCS5 686 aaPredicted RBP18.02■□□□□ 0.47
SCLT1-209ENST00000511426 ANAPC4Q9UJX5 808 aa18.02■□□□□ 0.47
SCLT1-209ENST00000511426 TAF6LQ9Y6J9 622 aa18.02■□□□□ 0.47
SCLT1-209ENST00000511426 PLCG2P16885 1265 aa18.01■□□□□ 0.47
SCLT1-209ENST00000511426 TDO2P48775 406 aa18.01■□□□□ 0.47
SCLT1-209ENST00000511426 EXOSC10Q01780 885 aaKnown RBP18.01■□□□□ 0.47
SCLT1-209ENST00000511426 CCDC93Q567U6 631 aa18.01■□□□□ 0.47
SCLT1-209ENST00000511426 TTLL5Q6EMB2 1281 aa18.01■□□□□ 0.47
SCLT1-209ENST00000511426 ADGRA1Q86SQ6 560 aa18.01■□□□□ 0.47
SCLT1-209ENST00000511426 MIGA1Q8NAN2 632 aa18.01■□□□□ 0.47
SCLT1-209ENST00000511426 G3V3G9 751 aa18■□□□□ 0.47
SCLT1-209ENST00000511426 MCM5P33992 734 aa18■□□□□ 0.47
SCLT1-209ENST00000511426 MFSD14BQ5SR56 506 aa18■□□□□ 0.47
SCLT1-209ENST00000511426 DCAF8Q5TAQ9 597 aa18■□□□□ 0.47
SCLT1-209ENST00000511426 SLC51AQ86UW1 340 aa18■□□□□ 0.47
SCLT1-209ENST00000511426 GPR101Q96P66 508 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms