RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 GUCY1B3Q02153 619 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 SLMAPQ14BN4 828 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 THOC7Q6I9Y2 204 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 GALNT17Q6IS24 598 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 SLC7A5P1Q8MH63 180 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 LZICQ8WZA0 190 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 UBXN4Q92575 508 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 ZMAT2Q96NC0 199 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 YIPF3Q9GZM5 350 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 TMED5Q9Y3A6 229 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CAPN7Q9Y6W3 813 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 KIF27Q86VH2 1401 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 GOLGA8AA7E2F4 631 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 TMEM232C9JQI7 657 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 FSBPO95073 299 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CHGAP10645 457 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CNGA3Q16281 694 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 MAP7D1Q3KQU3 841 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CCDC158Q5M9N0 1113 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 EMC10Q5UCC4 262 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CC2D1AQ6P1N0 951 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 GIGYF2Q6Y7W6 1299 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 CEP57Q86XR8 500 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 XAGE2Q96GT9 111 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 DHX36Q9H2U1 1008 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 L2HGDHQ9H9P8 463 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 IFT122Q9HBG6 1241 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 ARFGAP3Q9NP61 516 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 SLC39A2Q9NP94 309 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 ORC3Q9UBD5 711 aaPredicted RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 DDX20Q9UHI6 824 aaKnown RBP7.02□□□□□ -1.29
PDE4D-216ENST00000507116 TMCC3Q9ULS5 477 aa7.02□□□□□ -1.29
PDE4D-216ENST00000507116 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
PDE4D-216ENST00000507116 SOGA1O94964 1423 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 CCDC194A0A1B0GVG4 234 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 LSM1O15116 133 aaKnown RBP7.01□□□□□ -1.29
PDE4D-216ENST00000507116 KIAA0754O94854 1291 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 HOXD11P31277 338 aaPredicted RBP7.01□□□□□ -1.29
PDE4D-216ENST00000507116 DHX8Q14562 1220 aaKnown RBP7.01□□□□□ -1.29
PDE4D-216ENST00000507116 ARHGEF6Q15052 776 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 RSPH3Q86UC2 560 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 SMARCC1Q92922 1105 aaPredicted RBP7.01□□□□□ -1.29
PDE4D-216ENST00000507116 CDK5RAP3Q96JB5 506 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 PCDH18Q9HCL0 1135 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 KLC4Q9NSK0 619 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 PHF24Q9UPV7 400 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 SASH3O75995 380 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 NUCB1Q02818 461 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 C4orf46Q504U0 113 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
PDE4D-216ENST00000507116 NUGGCQ68CJ6 796 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 PAGR1Q9BTK6 254 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 TNMDQ9H2S6 317 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 SYNCQ9H7C4 482 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 ZWILCHQ9H900 591 aa7.01□□□□□ -1.29
PDE4D-216ENST00000507116 URB2Q14146 1524 aaKnown RBP7.01□□□□□ -1.29
PDE4D-216ENST00000507116 PABPN1LA6NDY0 278 aaKnown RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 P4HA2O15460 535 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 EVI5O60447 810 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 SMNDC1O75940 238 aaKnown RBP eCLIP7□□□□□ -1.29
PDE4D-216ENST00000507116 CYP2E1P05181 493 aaPredicted RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 BICDL1Q6ZP65 573 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 APLFQ8IW19 511 aaPredicted RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 ANKRD24Q8TF21 1146 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 HPS3Q969F9 1004 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 GSDMAQ96QA5 445 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 CDC5LQ99459 802 aaKnown RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 VCX3BQ9H321 246 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 SSX2IPQ9Y2D8 614 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 BZW2Q9Y6E2 419 aaKnown RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 PLEKHH2Q8IVE3 1493 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 SENP3-EIF4A1A0A087X0R7 540 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 TBKBP1A7MCY6 615 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 B4DLN1 442 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 SLC26A4O43511 780 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 TBCAO75347 108 aaKnown RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 GNAT1P11488 350 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 RPL17P18621 184 aaKnown RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 GNAI1P63096 354 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 WASHC5Q12768 1159 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 SNCBQ16143 134 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 ALDH1L2Q3SY69 923 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 ANKRD13DQ6ZTN6 518 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 ZBTB8BQ8NAP8 495 aaPredicted RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 FAM200AQ8TCP9 573 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 GCC1Q96CN9 775 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 NAP1L3Q99457 506 aaPredicted RBP7□□□□□ -1.29
PDE4D-216ENST00000507116 KLF15Q9UIH9 416 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 GOLGA6L4A6NEF3 574 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 NEMFO60524 1076 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 MTA2O94776 668 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 TUBB4AP04350 444 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 IDO1P14902 403 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 PTGS1P23219 599 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 PHEXP78562 749 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 KIRREL3Q8IZU9 778 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 CENPTQ96BT3 561 aa7□□□□□ -1.29
PDE4D-216ENST00000507116 AATFQ9NY61 560 aaKnown RBP eCLIP7□□□□□ -1.29
PDE4D-216ENST00000507116 GABBR1Q9UBS5 961 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms