RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MYSM1Q5VVJ2 828 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 TMEM232C9JQI7 657 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 TXLNAP40222 546 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 LMAN1P49257 510 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 GOLGA1Q92805 767 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 DSCC1Q9BVC3 393 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 COPRSQ9NQ92 184 aa19.71■□□□□ 0.75
SQSTM1-211ENST00000506690 E7EWF7 191 aa19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 POLR3DP05423 398 aaPredicted RBP19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 IGKV5-2P06315 115 aa19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 BRD3Q15059 726 aa19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 ISM2Q6H9L7 571 aa19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 BRAPQ7Z569 592 aa19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 RRP15Q9Y3B9 282 aaKnown RBP19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 TBX2Q13207 712 aaPredicted RBP19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 OTUD7BQ6GQQ9 843 aa19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 FBXL16Q8N461 479 aa19.7■□□□□ 0.74
SQSTM1-211ENST00000506690 MROH7-TTC4A0A0A0MT08 1334 aa19.69■□□□□ 0.74
SQSTM1-211ENST00000506690 DDX58O95786 925 aaKnown RBP19.69■□□□□ 0.74
SQSTM1-211ENST00000506690 EPHA10Q5JZY3 1008 aa19.69■□□□□ 0.74
SQSTM1-211ENST00000506690 KBTBD3Q8NAB2 608 aa19.69■□□□□ 0.74
SQSTM1-211ENST00000506690 BAG1Q99933 345 aaPredicted RBP19.69■□□□□ 0.74
SQSTM1-211ENST00000506690 INTS13Q9NVM9 706 aa19.69■□□□□ 0.74
SQSTM1-211ENST00000506690 STX10O60499 249 aa19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 AKAP4Q5JQC9 854 aa19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 HNRNPLLQ8WVV9 542 aaKnown RBP19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 DHX16O60231 1041 aaKnown RBP19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 TFCP2Q12800 502 aa19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 ANO1Q5XXA6 986 aa19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 DDX46Q7L014 1031 aaKnown RBP19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 DHX58Q96C10 678 aa19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 C8orf76Q96K31 380 aa19.68■□□□□ 0.74
SQSTM1-211ENST00000506690 MSL3Q8N5Y2 521 aaKnown RBP19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 A0A0G2JLW4 131 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 PRAMEF22A3QJZ6 481 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 WDHD1O75717 1129 aaPredicted RBP19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 RFX5P48382 616 aaPredicted RBP19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 TOGARAM2Q6ZUX3 1019 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 HELLSQ9NRZ9 838 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 HPSEQ9Y251 543 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 PLEKHG2Q9H7P9 1386 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 LTN1O94822 1766 aa19.67■□□□□ 0.74
SQSTM1-211ENST00000506690 PTPN21Q16825 1174 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 CTR9Q6PD62 1173 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 MPRIPQ6WCQ1 1025 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 DBNDD2Q9BQY9 259 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 FANCLQ9NW38 375 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 RPS6KA5O75582 802 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 IVLP07476 585 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 SYKP43405 635 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 PTPN12Q05209 780 aaKnown RBP19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 SYNE3Q6ZMZ3 975 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 CHST3Q7LGC8 479 aa19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 DDX21Q9NR30 783 aaKnown RBP eCLIP19.66■□□□□ 0.74
SQSTM1-211ENST00000506690 NEURL1BA8MQ27 555 aa19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 SLC39A14Q15043 492 aa19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 BEND6Q5SZJ8 279 aaPredicted RBP19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 TC2NQ8N9U0 490 aa19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 KIF28PB7ZC32 967 aa19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 USP5P45974 858 aa19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 IRX3P78415 501 aaPredicted RBP19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 C19orf44Q9H6X5 657 aa19.65■□□□□ 0.74
SQSTM1-211ENST00000506690 RNMTO43148 476 aaKnown RBP19.64■□□□□ 0.74
SQSTM1-211ENST00000506690 HSPD1P10809 573 aaKnown RBP19.64■□□□□ 0.74
SQSTM1-211ENST00000506690 AIMP1Q12904 312 aaKnown RBP19.64■□□□□ 0.74
SQSTM1-211ENST00000506690 GCKRQ14397 625 aa19.64■□□□□ 0.74
SQSTM1-211ENST00000506690 PDIA6Q15084 440 aa19.64■□□□□ 0.74
SQSTM1-211ENST00000506690 ZNF530Q6P9A1 599 aaPredicted RBP19.64■□□□□ 0.74
SQSTM1-211ENST00000506690 LEKR1Q6ZMV7 388 aa19.64■□□□□ 0.74
SQSTM1-211ENST00000506690 FAM237AA0A1B0GTK4 181 aa19.64■□□□□ 0.73
SQSTM1-211ENST00000506690 SRGAP1Q7Z6B7 1085 aa19.64■□□□□ 0.73
SQSTM1-211ENST00000506690 ANKZF1Q9H8Y5 726 aa19.64■□□□□ 0.73
SQSTM1-211ENST00000506690 PDE11AQ9HCR9 933 aa19.64■□□□□ 0.73
SQSTM1-211ENST00000506690 RAB21Q9UL25 225 aa19.64■□□□□ 0.73
SQSTM1-211ENST00000506690 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
SQSTM1-211ENST00000506690 KIF23Q02241 960 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 PNOCQ13519 176 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 IP6K1Q92551 441 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 VPS18Q9P253 973 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 CUTAO60888 179 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 CHMP4BP1P59074 171 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 ZMYM1Q5SVZ6 1142 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 OLFM4Q6UX06 510 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 HDXQ7Z353 690 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 TICAM2Q86XR7 235 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 ABTB2Q8N961 1025 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 YY1AP1Q9H869 796 aa19.63■□□□□ 0.73
SQSTM1-211ENST00000506690 MARCKSP29966 332 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 RIC3Q7Z5B4 369 aa19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 C14orf37Q86TY3 774 aa19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 MSANTD4Q8NCY6 345 aa19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 CCDC12Q8WUD4 166 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 SPECC1LQ69YQ0 1117 aa19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 SHC4Q6S5L8 630 aa19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 GPHNQ9NQX3 736 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 GJB4Q9NTQ9 266 aa19.62■□□□□ 0.73
SQSTM1-211ENST00000506690 PPP6R2O75170 966 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms